vtkImageEMAtlasClass Class Reference

!!bcd!!!include "vtkSlicer.h" More...

#include <vtkImageEMAtlasClass.h>

Inheritance diagram for vtkImageEMAtlasClass:

List of all members.

Public Member Functions
int	CheckAndAssignImageData (vtkImageData *inData, int outExt[6])
int	CheckInputImage (vtkImageData *inData, int DataTypeOrig, int num, int outExt[6])
double *	GetLogCovariance (int i)
double **	GetLogCovariance ()
double *	GetLogMu ()
void *	GetProbDataPtr ()
vtkImageData *	GetReferenceStandard ()
void	PrintSelf (ostream &os, vtkIndent indent)
void	SetLogCovariance (double value, int y, int x)
void	SetLogMu (double mu, int x)
void	SetNumInputImages (int number)
void	SetPrintQuality (int init)
void	SetProbDataPtr (void *initptr)
void	SetProbDataPtr (vtkImageData *image)
void	SetReferenceStandard (vtkImageData *image)
	vtkGetMacro (PrintQuality, int)
	vtkGetMacro (ProbDataIncZ, int)
	vtkGetMacro (ProbDataIncY, int)
	vtkSetMacro (Label, short)
	vtkTypeMacro (vtkImageEMAtlasClass, vtkObject)
Static Public Member Functions
static vtkImageEMAtlasClass *	New ()
Protected Member Functions
void	DeleteClassVariables ()
void	ExecuteData (vtkDataObject *)
void	operator= (const vtkImageEMAtlasClass &)
void	ThreadedExecute (vtkImageData **inData, vtkImageData *outData, int outExt[6], int id)
	vtkImageEMAtlasClass (const vtkImageEMAtlasClass &)
	vtkImageEMAtlasClass ()
	~vtkImageEMAtlasClass ()
Protected Attributes
double **	LogCovariance
double *	LogMu
int	PrintQuality
int	ProbDataIncY
int	ProbDataIncZ
void *	ProbDataPtr
vtkImageData *	ReferenceStandardPtr

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Detailed Description

!!bcd!!!include "vtkSlicer.h"

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Constructor & Destructor Documentation

vtkImageEMAtlasClass::vtkImageEMAtlasClass

(

)

[protected]

References LogCovariance, LogMu, PrintQuality, ProbDataIncY, ProbDataIncZ, ProbDataPtr, vtkImageEMGenericClass::ProbDataWeight, and ReferenceStandardPtr.

vtkImageEMAtlasClass::vtkImageEMAtlasClass

(

const vtkImageEMAtlasClass &

)

[inline, protected]

vtkImageEMAtlasClass::~vtkImageEMAtlasClass

(

)

[inline, protected]

---

Member Function Documentation

int vtkImageEMAtlasClass::CheckAndAssignImageData	(	vtkImageData *	inData,
		int	outExt[6]
	)

References CheckInputImage(), vtkImageEMGenericClass::DataDim, vtkImageEMGenericClass::Label, ProbDataIncY, ProbDataIncZ, vtkImageEMGenericClass::ProbDataScalarType, vtkImageEMGenericClass::SegmentationBoundaryMin, vtkEMAddErrorMessage, and vtkImageEMAtlasClassAssignProbDataPointer().

Referenced by ExecuteData().

int vtkImageEMAtlasClass::CheckInputImage	(	vtkImageData *	inData,
		int	DataTypeOrig,
		int	num,
		int	outExt[6]
	)

References vtkImageEMGenericClass::DataSpacing, vtkEMAddErrorMessage, and vtkFloatingPointType.

Referenced by CheckAndAssignImageData().

void vtkImageEMAtlasClass::DeleteClassVariables

(

)

[protected]

References LogCovariance, LogMu, vtkImageEMGenericClass::NumInputImages, ProbDataPtr, and ReferenceStandardPtr.

Referenced by SetNumInputImages().

void vtkImageEMAtlasClass::ExecuteData

(

vtkDataObject *

)

[protected]

!!bcd!!! int XDim= Ext[1] - Ext[0] + 1; !!bcd!!! int YDim= Ext[3] - Ext[2] + 1;

Reimplemented from vtkImageEMGenericClass.

References CheckAndAssignImageData(), vtkImageEMGenericClass::DataDim, vtkImageEMGenericClass::DataSpacing, vtkImageEMGenericClass::GetErrorFlag(), vtkImageEMGenericClass::GetErrorMessages(), j, k, vtkImageEMGenericClass::Label, LogCovariance, LogMu, vtkImageEMGenericClass::NumInputImages, vtkImageEMGenericClass::ProbDataWeight, vtkImageEMGenericClass::ResetErrorMessage(), vtkImageEMGenericClass::ResetWarningMessage(), return, vtkImageEMGenericClass::SegmentationBoundaryMax, vtkImageEMGenericClass::SegmentationBoundaryMin, vtkEMAddErrorMessage, and vtkEMAddWarningMessage.

double* vtkImageEMAtlasClass::GetLogCovariance

(

int

i

)

[inline]

double** vtkImageEMAtlasClass::GetLogCovariance

(

)

[inline]

double* vtkImageEMAtlasClass::GetLogMu

(

)

[inline]

void* vtkImageEMAtlasClass::GetProbDataPtr

(

)

[inline]

vtkImageData* vtkImageEMAtlasClass::GetReferenceStandard

(

)

[inline]

vtkImageEMAtlasClass * vtkImageEMAtlasClass::New

(

)

[static]

Reimplemented from vtkImageEMGenericClass.

References autoSlicerTracto2regions::ret.

void vtkImageEMAtlasClass::operator=

(

const vtkImageEMAtlasClass &

)

[inline, protected]

Reimplemented from vtkImageEMGenericClass.

void vtkImageEMAtlasClass::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)

Reimplemented from vtkImageEMGenericClass.

References LogCovariance, LogMu, vtkImageEMGenericClass::NumInputImages, PrintQuality, ProbDataIncY, ProbDataIncZ, ProbDataPtr, and ReferenceStandardPtr.

void vtkImageEMAtlasClass::SetLogCovariance	(	double	value,
		int	y,
		int	x
	)

References LogCovariance, vtkImageEMGenericClass::NumInputImages, and vtkEMAddErrorMessage.

void vtkImageEMAtlasClass::SetLogMu	(	double	mu,
		int	x
	)

References LogMu, vtkImageEMGenericClass::NumInputImages, and vtkEMAddErrorMessage.

void vtkImageEMAtlasClass::SetNumInputImages

(

int

number

)

Reimplemented from vtkImageEMGenericClass.

References DeleteClassVariables(), LogCovariance, LogMu, and vtkImageEMGenericClass::NumInputImages.

void vtkImageEMAtlasClass::SetPrintQuality

(

int

init

)

References EMSEGMENT_NUM_OF_QUALITY_MEASURE, PrintQuality, and vtkEMAddErrorMessage.

void vtkImageEMAtlasClass::SetProbDataPtr

(

void *

initptr

)

[inline]

void vtkImageEMAtlasClass::SetProbDataPtr

(

vtkImageData *

image

)

[inline]

void vtkImageEMAtlasClass::SetReferenceStandard

(

vtkImageData *

image

)

[inline]

void vtkImageEMAtlasClass::ThreadedExecute	(	vtkImageData **	inData,
		vtkImageData *	outData,
		int	outExt[6],
		int	id
	)			[inline, protected]

vtkImageEMAtlasClass::vtkGetMacro	(	PrintQuality	,
		int
	)

vtkImageEMAtlasClass::vtkGetMacro	(	ProbDataIncZ	,
		int
	)

vtkImageEMAtlasClass::vtkGetMacro	(	ProbDataIncY	,
		int
	)

vtkImageEMAtlasClass::vtkSetMacro	(	Label	,
		short
	)

vtkImageEMAtlasClass::vtkTypeMacro	(	vtkImageEMAtlasClass	,
		vtkObject
	)

Reimplemented from vtkImageEMGenericClass.

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Member Data Documentation

double** vtkImageEMAtlasClass::LogCovariance [protected]

Referenced by DeleteClassVariables(), ExecuteData(), PrintSelf(), SetLogCovariance(), SetNumInputImages(), and vtkImageEMAtlasClass().

double* vtkImageEMAtlasClass::LogMu [protected]

Referenced by DeleteClassVariables(), ExecuteData(), PrintSelf(), SetLogMu(), SetNumInputImages(), and vtkImageEMAtlasClass().

int vtkImageEMAtlasClass::PrintQuality [protected]

Referenced by PrintSelf(), SetPrintQuality(), and vtkImageEMAtlasClass().

int vtkImageEMAtlasClass::ProbDataIncY [protected]

Referenced by CheckAndAssignImageData(), PrintSelf(), and vtkImageEMAtlasClass().

int vtkImageEMAtlasClass::ProbDataIncZ [protected]

Referenced by CheckAndAssignImageData(), PrintSelf(), and vtkImageEMAtlasClass().

void* vtkImageEMAtlasClass::ProbDataPtr [protected]

Referenced by DeleteClassVariables(), PrintSelf(), and vtkImageEMAtlasClass().

vtkImageData* vtkImageEMAtlasClass::ReferenceStandardPtr [protected]

Referenced by DeleteClassVariables(), PrintSelf(), and vtkImageEMAtlasClass().

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The documentation for this class was generated from the following files:

• Modules/EMSegment/Algorithm/vtkImageEMAtlasClass.h
• Modules/EMSegment/Algorithm/vtkImageEMAtlasClass.cxx