vtkMRMLProstateNavManagerNode Class Reference

#include <vtkMRMLProstateNavManagerNode.h>

Inheritance diagram for vtkMRMLProstateNavManagerNode:

Public Types
enum	{ CurrentTargetChangedEvent = 200900 }
Public Member Functions
unsigned int	AddTargetDescriptor (vtkProstateNavTargetDescriptor *target)
bool	AddTargetToFiducialList (double targetRAS[3], unsigned int fiducialListIndex, unsigned int targetNr, int &fiducialIndex)
virtual void	Copy (vtkMRMLNode *node)
virtual vtkMRMLNode *	CreateNodeInstance ()
int	GetCurrentStep ()
NeedleDescriptorStruct *	GetNeedle (vtkProstateNavTargetDescriptor *targetDesc)
bool	GetNeedle (unsigned int needleIndex, NeedleDescriptorStruct &needleDesc)
virtual const char *	GetNodeTagName ()
int	GetNumberOfNeedles ()
int	GetNumberOfSteps ()
vtkMRMLRobotNode *	GetRobotNode ()
const char *	GetStepName (int i)
vtkProstateNavTargetDescriptor *	GetTargetDescriptorAtIndex (unsigned int index)
bool	GetTargetFromFiducialList (int fiducialListIndex, int fiducialIndex, double &r, double &a, double &s)
std::string	GetTargetingFiducialsListDescription (unsigned int index)
vtkMRMLFiducialListNode *	GetTargetPlanListNode ()
int	GetTotalNumberOfTargets ()
void	Init (const char *defaultNeedleListConfig)
void	PrintSelf (ostream &os, vtkIndent indent)
virtual void	ProcessMRMLEvents (vtkObject caller, unsigned long event, void callData)
virtual void	ReadXMLAttributes (const char **atts)
int	RemoveTargetDescriptorAtIndex (unsigned int index)
void	SetAndObserveRobotNodeID (const char *robotNodeID)
void	SetAndObserveTargetPlanListNodeID (const char *targetPlanListNodeID)
int	SetCurrentTargetIndex (int index)
void	SetFiducialColor (int fiducialIndex, bool selected)
bool	SetNeedle (unsigned int needleIndex, NeedleDescriptorStruct needleDesc)
int	SwitchStep (int newStep)
void	UpdateReferenceID (const char oldID, const char newID)
void	UpdateReferences ()
virtual void	UpdateScene (vtkMRMLScene *)
	vtkGetMacro (CurrentTargetIndex, int)
	vtkGetMacro (CurrentNeedleIndex, int)
	vtkGetStringMacro (RobotNodeID)
	vtkGetStringMacro (TargetPlanListNodeID)
	vtkGetStringMacro (VerificationVolumeNodeRef)
	vtkGetStringMacro (TargetingVolumeNodeRef)
	vtkSetMacro (CurrentNeedleIndex, int)
	vtkSetReferenceStringMacro (VerificationVolumeNodeRef)
	vtkSetReferenceStringMacro (TargetingVolumeNodeRef)
	vtkTypeMacro (vtkMRMLProstateNavManagerNode, vtkMRMLNode)
virtual void	WriteXML (ostream &of, int indent)
Static Public Member Functions
static const char *	GetProstateNavModuleVersion ()
static int	GetProstateNavWorkingCopyRevision ()
static vtkMRMLProstateNavManagerNode *	New ()
Protected Member Functions
bool	GetAttNameSection (const std::string &attName, const std::string &groupName, unsigned int &sectionInd, std::string &sectionName)
vtkStdString	GetWorkflowStepsString ()
void	operator= (const vtkMRMLProstateNavManagerNode &)
bool	ReadNeedleListFromConfigXml (const char *needleListConfigStr)
bool	SetWorkflowStepsFromString (const vtkStdString &workflowStepsString)
	vtkMRMLProstateNavManagerNode (const vtkMRMLProstateNavManagerNode &)
	vtkMRMLProstateNavManagerNode ()
	vtkSetReferenceStringMacro (RobotNodeID)
	vtkSetReferenceStringMacro (TargetPlanListNodeID)
	~vtkMRMLProstateNavManagerNode ()
Protected Attributes
int	CurrentNeedleIndex
int	CurrentStep
int	CurrentTargetIndex
bool	Initialized
std::vector < NeedleDescriptorStruct >	NeedlesVector
vtkMRMLRobotNode *	RobotNode
char *	RobotNodeID
vtkStringArray *	StepList
std::vector < vtkProstateNavTargetDescriptor * >	TargetDescriptorsVector
char *	TargetingVolumeNodeRef
vtkMRMLFiducialListNode *	TargetPlanListNode
char *	TargetPlanListNodeID
char *	VerificationVolumeNodeRef

Member Enumeration Documentation

anonymous enum

Enumerator:

CurrentTargetChangedEvent

Constructor & Destructor Documentation

vtkMRMLProstateNavManagerNode::vtkMRMLProstateNavManagerNode ( ) [protected]

References CurrentNeedleIndex, CurrentStep, CurrentTargetIndex, Initialized, New(), RobotNode, RobotNodeID, StepList, TargetDescriptorsVector, TargetingVolumeNodeRef, TargetPlanListNode, TargetPlanListNodeID, and VerificationVolumeNodeRef.

vtkMRMLProstateNavManagerNode::~vtkMRMLProstateNavManagerNode ( ) [protected]

References RobotNodeID, SetAndObserveRobotNodeID(), SetAndObserveTargetPlanListNodeID(), StepList, TargetDescriptorsVector, and TargetPlanListNodeID.

vtkMRMLProstateNavManagerNode::vtkMRMLProstateNavManagerNode ( const vtkMRMLProstateNavManagerNode & ) [protected]

Member Function Documentation

unsigned int vtkMRMLProstateNavManagerNode::AddTargetDescriptor ( vtkProstateNavTargetDescriptor * target )

References TargetDescriptorsVector.

Referenced by vtkProstateNavLogic::UpdateTargetListFromMRML().

bool vtkMRMLProstateNavManagerNode::AddTargetToFiducialList	(	double	targetRAS[3],
		unsigned int	fiducialListIndex,
		unsigned int	targetNr,
		int &	fiducialIndex
	)

References vtkMRMLFiducialListNode::AddFiducialWithXYZ(), vtkMRMLNode::EndModify(), vtkMRMLFiducialListNode::FiducialModifiedEvent, GetTargetPlanListNode(), NeedlesVector, vtkMRMLFiducialListNode::SetNthFiducialID(), vtkMRMLFiducialListNode::SetNthFiducialLabelText(), vtkMRMLFiducialListNode::SetNthFiducialVisibility(), and vtkMRMLNode::StartModify().

void vtkMRMLProstateNavManagerNode::Copy ( vtkMRMLNode * node ) [virtual]

References CurrentStep, vtkProstateNavTargetDescriptor::DeepCopy(), vtkMRMLNode::HideFromEditors, NeedlesVector, New(), RobotNodeID, SetAndObserveRobotNodeID(), SetAndObserveTargetPlanListNodeID(), StepList, TargetDescriptorsVector, TargetingVolumeNodeRef, TargetPlanListNodeID, and VerificationVolumeNodeRef.

vtkMRMLNode * vtkMRMLProstateNavManagerNode::CreateNodeInstance ( ) [virtual]

Create instance of the default node. Like New only virtual NOTE: Subclasses should implement this method

Implements vtkMRMLNode.

References autoSlicerTracto2regions::ret.

bool vtkMRMLProstateNavManagerNode::GetAttNameSection	(	const std::string &	attName,
		const std::string &	groupName,
		unsigned int &	sectionInd,
		std::string &	sectionName
	)			`[protected]`

Referenced by ReadXMLAttributes().

int vtkMRMLProstateNavManagerNode::GetCurrentStep ( )

References CurrentStep.

Referenced by vtkProstateNavGUI::ProcessGUIEvents(), vtkProstateNavGUI::SetAndObserveRobotNodeID(), and vtkProstateNavGUI::UpdateGUI().

NeedleDescriptorStruct * vtkMRMLProstateNavManagerNode::GetNeedle ( vtkProstateNavTargetDescriptor * targetDesc )

References vtkProstateNavTargetDescriptor::GetNeedleID(), GetNumberOfNeedles(), and NeedlesVector.

bool vtkMRMLProstateNavManagerNode::GetNeedle	(	unsigned int	needleIndex,
		NeedleDescriptorStruct &	needleDesc
	)

References NeedlesVector.

Referenced by vtkProstateNavGUI::BringTargetToViewIn2DViews(), SetCurrentTargetIndex(), vtkProstateNavGUI::UpdateCurrentTargetDisplayInSecondaryWindow(), vtkProstateNavTargetingStep::UpdateGUI(), vtkProstateNavLogic::UpdateTargetListFromMRML(), vtkProstateNavTargetingStep::UpdateTargetListGUI(), and vtkProstateNavStepVerification::UpdateTargetListGUI().

virtual const char* vtkMRMLProstateNavManagerNode::GetNodeTagName ( ) [inline, virtual]

Get node XML tag name (like Volume, Model) NOTE: Subclasses should implement this method

Implements vtkMRMLNode.

int vtkMRMLProstateNavManagerNode::GetNumberOfNeedles ( ) [inline]

Referenced by GetNeedle(), ReadNeedleListFromConfigXml(), and vtkProstateNavTargetingStep::UpdateGUI().

int vtkMRMLProstateNavManagerNode::GetNumberOfSteps ( )

References StepList.

Referenced by vtkProstateNavGUI::ChangeWorkphaseInGUI(), vtkProstateNavGUI::ProcessGUIEvents(), SwitchStep(), vtkProstateNavGUI::UpdateGUI(), and vtkProstateNavGUI::UpdateWorkflowSteps().

const char * vtkMRMLProstateNavManagerNode::GetProstateNavModuleVersion ( ) [static]

Referenced by vtkProstateNavGUI::BuildGUIForHelpFrame(), and WriteXML().

int vtkMRMLProstateNavManagerNode::GetProstateNavWorkingCopyRevision ( ) [static]

Referenced by vtkProstateNavGUI::BuildGUIForHelpFrame().

vtkMRMLRobotNode * vtkMRMLProstateNavManagerNode::GetRobotNode ( )

References vtkMRMLScene::GetNodeByID(), vtkMRMLNode::GetScene(), and RobotNodeID.

Referenced by vtkProstateNavGUI::BringTargetToViewIn2DViews(), vtkProstateNavStepSetUp::GetRobotNode(), vtkProstateNavLogic::GetRobotNode(), SetAndObserveRobotNodeID(), SetCurrentTargetIndex(), vtkProstateNavGUI::UpdateCurrentTargetDisplayInSecondaryWindow(), and vtkProstateNavGUI::UpdateStatusButtons().

const char * vtkMRMLProstateNavManagerNode::GetStepName ( int i )

References StepList.

Referenced by vtkProstateNavGUI::UpdateWorkflowSteps().

vtkProstateNavTargetDescriptor * vtkMRMLProstateNavManagerNode::GetTargetDescriptorAtIndex ( unsigned int index )

References TargetDescriptorsVector.

Referenced by vtkProstateNavGUI::BringTargetToViewIn2DViews(), vtkProstateNavLogic::GetTargetIndexFromFiducialID(), vtkProstateNavLogic::LinkTargetsToFiducials(), vtkProstateNavTargetingStep::ProcessGUIEvents(), vtkProstateNavStepTargetingTemplate::ProcessGUIEvents(), RemoveTargetDescriptorAtIndex(), SetCurrentTargetIndex(), vtkProstateNavGUI::UpdateCurrentTargetDisplay(), vtkProstateNavGUI::UpdateCurrentTargetDisplayInSecondaryWindow(), vtkProstateNavTargetingStep::UpdateGUI(), vtkProstateNavLogic::UpdateTargetListFromMRML(), vtkProstateNavTargetingStep::UpdateTargetListGUI(), vtkProstateNavStepVerification::UpdateTargetListGUI(), and vtkProstateNavStepTargetingTemplate::UpdateTargetListGUI().

bool vtkMRMLProstateNavManagerNode::GetTargetFromFiducialList	(	int	fiducialListIndex,
		int	fiducialIndex,
		double &	r,
		double &	a,
		double &	s
	)

References vtkMRMLFiducialListNode::GetNthFiducialXYZ(), GetTargetPlanListNode(), and NeedlesVector.

std::string vtkMRMLProstateNavManagerNode::GetTargetingFiducialsListDescription ( unsigned int index ) [inline]

vtkMRMLFiducialListNode * vtkMRMLProstateNavManagerNode::GetTargetPlanListNode ( )

References vtkMRMLScene::GetNodeByID(), vtkMRMLNode::GetScene(), and TargetPlanListNodeID.

Referenced by vtkProstateNavTargetingStep::AddMRMLObservers(), vtkProstateNavStepTargetingTemplate::AddMRMLObservers(), AddTargetToFiducialList(), GetTargetFromFiducialList(), Init(), vtkProstateNavLogic::LinkTargetsToFiducials(), SetAndObserveTargetPlanListNodeID(), SetFiducialColor(), vtkProstateNavGUI::UpdateCurrentTargetDisplay(), and vtkProstateNavLogic::UpdateTargetListFromMRML().

int vtkMRMLProstateNavManagerNode::GetTotalNumberOfTargets ( ) [inline]

Referenced by vtkProstateNavLogic::GetTargetIndexFromFiducialID(), vtkProstateNavLogic::LinkTargetsToFiducials(), vtkProstateNavLogic::UpdateTargetListFromMRML(), vtkProstateNavTargetingStep::UpdateTargetListGUI(), vtkProstateNavStepVerification::UpdateTargetListGUI(), and vtkProstateNavStepTargetingTemplate::UpdateTargetListGUI().

vtkStdString vtkMRMLProstateNavManagerNode::GetWorkflowStepsString ( ) [protected]

References StepList.

void vtkMRMLProstateNavManagerNode::Init ( const char * defaultNeedleListConfig )

References vtkMRMLScene::AddNode(), vtkMRMLNode::GetScene(), GetTargetPlanListNode(), Initialized, New(), ReadNeedleListFromConfigXml(), vtkMRMLNode::Scene, SetAndObserveTargetPlanListNodeID(), and vtkMRMLFiducialListNode::Sphere3D.

Referenced by vtkProstateNavGUI::SetAndObserveProstateNavManagerNodeID().

vtkMRMLProstateNavManagerNode * vtkMRMLProstateNavManagerNode::New ( ) [static]

Reimplemented from vtkMRMLNode.

References autoSlicerTracto2regions::ret.

Referenced by Copy(), Init(), ReadXMLAttributes(), and vtkMRMLProstateNavManagerNode().

void vtkMRMLProstateNavManagerNode::operator= ( const vtkMRMLProstateNavManagerNode & ) [protected]

Reimplemented from vtkMRMLNode.

void vtkMRMLProstateNavManagerNode::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)

Reimplemented from vtkMRMLNode.

void vtkMRMLProstateNavManagerNode::ProcessMRMLEvents	(	vtkObject *	caller,
		unsigned long	event,
		void *	callData
	)			`[virtual]`

method to propagate events generated in mrml

Reimplemented from vtkMRMLNode.

References TargetPlanListNode.

bool vtkMRMLProstateNavManagerNode::ReadNeedleListFromConfigXml ( const char * needleListConfigStr ) [protected]

References CurrentNeedleIndex, GetNumberOfNeedles(), NeedleDescriptorStruct::mDescription, NeedleDescriptorStruct::mDiameter, NeedleDescriptorStruct::mID, NeedleDescriptorStruct::mLastTargetIndex, NeedleDescriptorStruct::mLength, NeedleDescriptorStruct::mTargetBase, NeedleDescriptorStruct::mTargetLength, NeedleDescriptorStruct::mTargetNamePrefix, NeedleDescriptorStruct::mThrow, NeedleDescriptorStruct::mTipLength, and NeedlesVector.

Referenced by Init().

void vtkMRMLProstateNavManagerNode::ReadXMLAttributes ( const char ** atts ) [virtual]

Set node attributes NOTE: Subclasses should implement this method NOTE: Call this method in the subclass impementation

Reimplemented from vtkMRMLNode.

int vtkMRMLProstateNavManagerNode::RemoveTargetDescriptorAtIndex ( unsigned int index )

References GetTargetDescriptorAtIndex(), and TargetDescriptorsVector.

Referenced by vtkProstateNavLogic::UpdateTargetListFromMRML().

void vtkMRMLProstateNavManagerNode::SetAndObserveRobotNodeID ( const char * robotNodeID )

References vtkMRMLScene::GetNodeByID(), GetRobotNode(), vtkMRMLNode::GetScene(), vtkMRMLRobotNode::GetWorkflowStepsString(), RobotNode, RobotNodeID, SetWorkflowStepsFromString(), and vtkSetAndObserveMRMLObjectMacro.

Referenced by Copy(), vtkProstateNavGUI::ProcessGUIEvents(), vtkProstateNavGUI::ProcessMRMLEvents(), ReadXMLAttributes(), UpdateReferenceID(), UpdateReferences(), UpdateScene(), and ~vtkMRMLProstateNavManagerNode().

void vtkMRMLProstateNavManagerNode::SetAndObserveTargetPlanListNodeID ( const char * targetPlanListNodeID )

References GetTargetPlanListNode(), TargetPlanListNode, and vtkSetAndObserveMRMLObjectMacro.

Referenced by Copy(), Init(), vtkProstateNavStepTargetingTemplate::ProcessGUIEvents(), ReadXMLAttributes(), UpdateReferenceID(), UpdateReferences(), UpdateScene(), and ~vtkMRMLProstateNavManagerNode().

int vtkMRMLProstateNavManagerNode::SetCurrentTargetIndex ( int index )

References CurrentTargetChangedEvent, CurrentTargetIndex, GetNeedle(), GetRobotNode(), GetTargetDescriptorAtIndex(), vtkMRMLNode::Modified(), vtkMRMLRobotNode::ShowRobotAtTarget(), and TargetDescriptorsVector.

Referenced by vtkProstateNavTargetingStep::ProcessGUIEvents(), and vtkProstateNavStepTargetingTemplate::ProcessGUIEvents().

void vtkMRMLProstateNavManagerNode::SetFiducialColor	(	int	fiducialIndex,
		bool	selected
	)

References vtkMRMLNode::EndModify(), vtkMRMLFiducialListNode::FiducialModifiedEvent, GetTargetPlanListNode(), vtkMRMLFiducialListNode::SetNthFiducialSelected(), and vtkMRMLNode::StartModify().

bool vtkMRMLProstateNavManagerNode::SetNeedle	(	unsigned int	needleIndex,
		NeedleDescriptorStruct	needleDesc
	)

References NeedlesVector.

Referenced by vtkProstateNavLogic::UpdateTargetListFromMRML().

bool vtkMRMLProstateNavManagerNode::SetWorkflowStepsFromString ( const vtkStdString & workflowStepsString ) [protected]

References vtkMRMLNode::Modified(), and StepList.

Referenced by SetAndObserveRobotNodeID().

int vtkMRMLProstateNavManagerNode::SwitchStep ( int newStep )

References CurrentStep, GetNumberOfSteps(), RobotNode, StepList, and vtkMRMLRobotNode::SwitchStep().

Referenced by vtkProstateNavGUI::ProcessGUIEvents().

void vtkMRMLProstateNavManagerNode::UpdateReferenceID	(	const char *	oldID,
		const char *	newID
	)			`[virtual]`

Update the stored reference to another node in the scene

Reimplemented from vtkMRMLNode.

References RobotNodeID, SetAndObserveRobotNodeID(), SetAndObserveTargetPlanListNodeID(), TargetingVolumeNodeRef, TargetPlanListNodeID, and VerificationVolumeNodeRef.

void vtkMRMLProstateNavManagerNode::UpdateReferences ( ) [virtual]

Updates this node if it depends on other nodes when the node is deleted in the scene

Reimplemented from vtkMRMLNode.

References vtkMRMLScene::GetNodeByID(), RobotNodeID, vtkMRMLNode::Scene, SetAndObserveRobotNodeID(), SetAndObserveTargetPlanListNodeID(), TargetingVolumeNodeRef, TargetPlanListNodeID, and VerificationVolumeNodeRef.

void vtkMRMLProstateNavManagerNode::UpdateScene ( vtkMRMLScene * ) [virtual]

Updates other nodes in the scene depending on this node or updates this node if it depends on other nodes when the scene is read in This method is called automatically by XML parser after all nodes are created

Reimplemented from vtkMRMLNode.

References RobotNodeID, SetAndObserveRobotNodeID(), SetAndObserveTargetPlanListNodeID(), and TargetPlanListNodeID.

vtkMRMLProstateNavManagerNode::vtkGetMacro	(	CurrentTargetIndex	,
		int
	)

vtkMRMLProstateNavManagerNode::vtkGetMacro	(	CurrentNeedleIndex	,
		int
	)

vtkMRMLProstateNavManagerNode::vtkGetStringMacro ( RobotNodeID )

vtkMRMLProstateNavManagerNode::vtkGetStringMacro ( TargetPlanListNodeID )

vtkMRMLProstateNavManagerNode::vtkGetStringMacro ( VerificationVolumeNodeRef )

vtkMRMLProstateNavManagerNode::vtkGetStringMacro ( TargetingVolumeNodeRef )

vtkMRMLProstateNavManagerNode::vtkSetMacro	(	CurrentNeedleIndex	,
		int
	)

vtkMRMLProstateNavManagerNode::vtkSetReferenceStringMacro ( RobotNodeID ) [protected]

vtkMRMLProstateNavManagerNode::vtkSetReferenceStringMacro ( TargetPlanListNodeID ) [protected]

vtkMRMLProstateNavManagerNode::vtkSetReferenceStringMacro ( VerificationVolumeNodeRef )

vtkMRMLProstateNavManagerNode::vtkSetReferenceStringMacro ( TargetingVolumeNodeRef )

vtkMRMLProstateNavManagerNode::vtkTypeMacro	(	vtkMRMLProstateNavManagerNode	,
		vtkMRMLNode
	)

void vtkMRMLProstateNavManagerNode::WriteXML	(	ostream &	of,
		int	indent
	)			`[virtual]`

Write this node's information to a MRML file in XML format. NOTE: Subclasses should implement this method NOTE: Call this method in the subclass impementation

Reimplemented from vtkMRMLNode.

References CurrentNeedleIndex, CurrentStep, CurrentTargetIndex, GetProstateNavModuleVersion(), NeedlesVector, RobotNodeID, TargetDescriptorsVector, TargetingVolumeNodeRef, TargetPlanListNodeID, and VerificationVolumeNodeRef.