vtkMRMLVolumeHeaderlessStorageNode Class Reference

#include <vtkMRMLVolumeHeaderlessStorageNode.h>

Inheritance diagram for vtkMRMLVolumeHeaderlessStorageNode:

Public Member Functions
virtual void	Copy (vtkMRMLNode *node)
virtual vtkMRMLNode *	CreateNodeInstance ()
const char *	GetFileScalarTypeAsString ()
virtual const char *	GetNodeTagName ()
virtual void	InitializeSupportedWriteFileTypes ()
void	PrintSelf (ostream &os, vtkIndent indent)
virtual void	ProcessParentNode (vtkMRMLNode *parentNode)
virtual int	ReadData (vtkMRMLNode *refNode)
virtual void	ReadXMLAttributes (const char **atts)
void	SetFileScalarTypeAsString (const char *)
void	SetFileScalarTypeToChar ()
void	SetFileScalarTypeToDouble ()
void	SetFileScalarTypeToFloat ()
void	SetFileScalarTypeToInt ()
void	SetFileScalarTypeToLong ()
void	SetFileScalarTypeToShort ()
void	SetFileScalarTypeToUnsignedChar ()
void	SetFileScalarTypeToUnsignedInt ()
void	SetFileScalarTypeToUnsignedLong ()
void	SetFileScalarTypeToUnsignedShort ()
virtual int	SupportedFileType (const char *fileName)
	vtkBooleanMacro (FileLittleEndian, int)
	vtkGetMacro (CenterImage, int)
	vtkGetMacro (FileLittleEndian, int)
	vtkGetMacro (FileNumberOfScalarComponents, int)
	vtkGetMacro (FileScalarType, int)
	vtkGetStringMacro (FileScanOrder)
	vtkGetVector3Macro (FileSpacing, double)
	vtkGetVector3Macro (FileDimensions, int)
	vtkSetMacro (CenterImage, int)
	vtkSetMacro (FileLittleEndian, int)
	vtkSetMacro (FileNumberOfScalarComponents, int)
	vtkSetMacro (FileScalarType, int)
	vtkSetStringMacro (FileScanOrder)
	vtkSetVector3Macro (FileSpacing, double)
	vtkSetVector3Macro (FileDimensions, int)
	vtkTypeMacro (vtkMRMLVolumeHeaderlessStorageNode, vtkMRMLStorageNode)
virtual int	WriteData (vtkMRMLNode *refNode)
virtual void	WriteXML (ostream &of, int indent)
Static Public Member Functions
static vtkMRMLVolumeHeaderlessStorageNode *	New ()
Protected Member Functions
void	operator= (const vtkMRMLVolumeHeaderlessStorageNode &)
	vtkMRMLVolumeHeaderlessStorageNode (const vtkMRMLVolumeHeaderlessStorageNode &)
	vtkMRMLVolumeHeaderlessStorageNode ()
	~vtkMRMLVolumeHeaderlessStorageNode ()
Protected Attributes
int	CenterImage
int	FileDimensions [3]
int	FileLittleEndian
int	FileNumberOfScalarComponents
int	FileScalarType
char *	FileScanOrder
double	FileSpacing [3]
char *	WriteFileFormat

Constructor & Destructor Documentation

vtkMRMLVolumeHeaderlessStorageNode::vtkMRMLVolumeHeaderlessStorageNode ( ) [protected]

References FileDimensions, FileLittleEndian, FileNumberOfScalarComponents, FileScalarType, FileScanOrder, and FileSpacing.

vtkMRMLVolumeHeaderlessStorageNode::~vtkMRMLVolumeHeaderlessStorageNode ( ) [protected]

References FileScanOrder.

vtkMRMLVolumeHeaderlessStorageNode::vtkMRMLVolumeHeaderlessStorageNode ( const vtkMRMLVolumeHeaderlessStorageNode & ) [protected]

Member Function Documentation

void vtkMRMLVolumeHeaderlessStorageNode::Copy ( vtkMRMLNode * node ) [virtual]

Copy the node's attributes to this object

Reimplemented from vtkMRMLStorageNode.

References CenterImage, vtkMRMLNode::EndModify(), FileDimensions, FileLittleEndian, FileNumberOfScalarComponents, FileScalarType, FileScanOrder, FileSpacing, and vtkMRMLNode::StartModify().

vtkMRMLNode * vtkMRMLVolumeHeaderlessStorageNode::CreateNodeInstance ( ) [virtual]

Create instance of the default node. Like New only virtual NOTE: Subclasses should implement this method

Implements vtkMRMLStorageNode.

References autoSlicerTracto2regions::ret.

const char * vtkMRMLVolumeHeaderlessStorageNode::GetFileScalarTypeAsString ( )

References FileScalarType.

virtual const char* vtkMRMLVolumeHeaderlessStorageNode::GetNodeTagName ( ) [inline, virtual]

Get node XML tag name (like Storage, Model)

Implements vtkMRMLStorageNode.

void vtkMRMLVolumeHeaderlessStorageNode::InitializeSupportedWriteFileTypes ( ) [virtual]

Initialize all the supported write file types

Reimplemented from vtkMRMLStorageNode.

References vtkMRMLNode::GetScene(), and vtkMRMLStorageNode::SupportedWriteFileTypes.

vtkMRMLVolumeHeaderlessStorageNode * vtkMRMLVolumeHeaderlessStorageNode::New ( ) [static]

Reimplemented from vtkMRMLStorageNode.

References autoSlicerTracto2regions::ret.

Referenced by ReadData(), and WriteData().

void vtkMRMLVolumeHeaderlessStorageNode::operator= ( const vtkMRMLVolumeHeaderlessStorageNode & ) [protected]

Reimplemented from vtkMRMLStorageNode.

void vtkMRMLVolumeHeaderlessStorageNode::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)

Reimplemented from vtkMRMLStorageNode.

References FileDimensions, FileLittleEndian, FileNumberOfScalarComponents, FileScalarType, FileScanOrder, and FileSpacing.

void vtkMRMLVolumeHeaderlessStorageNode::ProcessParentNode ( vtkMRMLNode * parentNode ) [virtual]

Description: Set dependencies between this node and the parent node when parsing XML file

References ReadData().

int vtkMRMLVolumeHeaderlessStorageNode::ReadData ( vtkMRMLNode * refNode ) [virtual]

Read data and set it in the referenced node NOTE: Subclasses should implement this method

Implements vtkMRMLStorageNode.

References vtkMRMLVolumeNode::ComputeIJKToRASFromScanOrder(), vtkMRMLStorageNode::GetFullNameFromFileName(), vtkMRMLNode::GetScene(), vtkMRMLNode::MRMLCallbackCommand, New(), result, vtkMRMLVolumeNode::SetAndObserveImageData(), vtkMRMLStorableNode::SetAndObserveStorageNodeID(), vtkMRMLVolumeNode::SetIJKToRASMatrix(), vtkMRMLStorageNode::SetReadStateIdle(), vtkMRMLStorageNode::StageReadData(), and vtkMRMLStorageNode::TransferDone.

Referenced by vtkSlicerVolumesLogic::AddHeaderVolume(), and ProcessParentNode().

void vtkMRMLVolumeHeaderlessStorageNode::ReadXMLAttributes ( const char ** atts ) [virtual]

Read node attributes from XML file

Reimplemented from vtkMRMLStorageNode.

References CenterImage, vtkMRMLNode::EndModify(), FileDimensions, FileLittleEndian, FileNumberOfScalarComponents, FileScalarType, FileSpacing, and vtkMRMLNode::StartModify().

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeAsString ( const char * type )

References FileScalarType.

Referenced by vtkSlicerVolumeFileHeaderWidget::GetVolumeHeaderlessStorageNode().

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToChar ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToDouble ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToFloat ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToInt ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToLong ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToShort ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToUnsignedChar ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToUnsignedInt ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToUnsignedLong ( ) [inline]

void vtkMRMLVolumeHeaderlessStorageNode::SetFileScalarTypeToUnsignedShort ( ) [inline]

int vtkMRMLVolumeHeaderlessStorageNode::SupportedFileType ( const char * fileName ) [virtual]

Check to see if this storage node can handle the file type in the input string. If input string is null, check URI, then check FileName. Subclasses should implement this method.

Reimplemented from vtkMRMLStorageNode.

References vtkMRMLStorageNode::FileName, slicerget::name, and vtkMRMLStorageNode::URI.

vtkMRMLVolumeHeaderlessStorageNode::vtkBooleanMacro	(	FileLittleEndian	,
		int
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkGetMacro	(	CenterImage	,
		int
	)

Center image on read

vtkMRMLVolumeHeaderlessStorageNode::vtkGetMacro	(	FileLittleEndian	,
		int
	)

Describes the order of bytes for each voxel. Little endian positions the least-significant byte on the rightmost end, and is true of data generated on a PC or SGI.

vtkMRMLVolumeHeaderlessStorageNode::vtkGetMacro	(	FileNumberOfScalarComponents	,
		int
	)

The number of scalar components for each voxel. Gray-level data has 1. Color data has 3

vtkMRMLVolumeHeaderlessStorageNode::vtkGetMacro	(	FileScalarType	,
		int
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkGetStringMacro ( FileScanOrder )

Scan order in the file

vtkMRMLVolumeHeaderlessStorageNode::vtkGetVector3Macro	(	FileSpacing	,
		double
	)

Three numbers for the dimensions of each voxel, in millimeters

vtkMRMLVolumeHeaderlessStorageNode::vtkGetVector3Macro	(	FileDimensions	,
		int
	)

Two numbers: the number of columns and rows of pixels in each image

vtkMRMLVolumeHeaderlessStorageNode::vtkSetMacro	(	CenterImage	,
		int
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkSetMacro	(	FileLittleEndian	,
		int
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkSetMacro	(	FileNumberOfScalarComponents	,
		int
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkSetMacro	(	FileScalarType	,
		int
	)

The type of data in the file. One of: Char, UnsignedChar, Short, UnsignedShort, Int, UnsignedInt, Long, UnsignedLong, Float, Double

vtkMRMLVolumeHeaderlessStorageNode::vtkSetStringMacro ( FileScanOrder )

vtkMRMLVolumeHeaderlessStorageNode::vtkSetVector3Macro	(	FileSpacing	,
		double
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkSetVector3Macro	(	FileDimensions	,
		int
	)

vtkMRMLVolumeHeaderlessStorageNode::vtkTypeMacro	(	vtkMRMLVolumeHeaderlessStorageNode	,
		vtkMRMLStorageNode
	)

int vtkMRMLVolumeHeaderlessStorageNode::WriteData ( vtkMRMLNode * refNode ) [virtual]

Write data from a referenced node NOTE: Subclasses should implement this method

Implements vtkMRMLStorageNode.

References vtkMRMLStorageNode::GetFullNameFromFileName(), vtkMRMLVolumeNode::GetRASToIJKMatrix(), vtkMRMLNode::GetScene(), New(), result, vtkMRMLStorageNode::StageWriteData(), and WriteFileFormat.

void vtkMRMLVolumeHeaderlessStorageNode::WriteXML	(	ostream &	of,
		int	indent
	)			`[virtual]`

Write this node's information to a MRML file in XML format.

Reimplemented from vtkMRMLStorageNode.

References CenterImage, FileDimensions, FileLittleEndian, FileNumberOfScalarComponents, FileScalarType, FileScanOrder, and FileSpacing.

Member Data Documentation

int vtkMRMLVolumeHeaderlessStorageNode::CenterImage [protected]

Referenced by Copy(), ReadXMLAttributes(), and WriteXML().

int vtkMRMLVolumeHeaderlessStorageNode::FileDimensions[3] [protected]

Referenced by Copy(), PrintSelf(), ReadXMLAttributes(), vtkMRMLVolumeHeaderlessStorageNode(), and WriteXML().

int vtkMRMLVolumeHeaderlessStorageNode::FileLittleEndian [protected]

Referenced by Copy(), PrintSelf(), ReadXMLAttributes(), vtkMRMLVolumeHeaderlessStorageNode(), and WriteXML().

int vtkMRMLVolumeHeaderlessStorageNode::FileNumberOfScalarComponents [protected]

Referenced by Copy(), PrintSelf(), ReadXMLAttributes(), vtkMRMLVolumeHeaderlessStorageNode(), and WriteXML().

int vtkMRMLVolumeHeaderlessStorageNode::FileScalarType [protected]

Referenced by Copy(), GetFileScalarTypeAsString(), PrintSelf(), ReadXMLAttributes(), SetFileScalarTypeAsString(), vtkMRMLVolumeHeaderlessStorageNode(), and WriteXML().

char* vtkMRMLVolumeHeaderlessStorageNode::FileScanOrder [protected]

Referenced by Copy(), PrintSelf(), vtkMRMLVolumeHeaderlessStorageNode(), WriteXML(), and ~vtkMRMLVolumeHeaderlessStorageNode().

double vtkMRMLVolumeHeaderlessStorageNode::FileSpacing[3] [protected]

Referenced by Copy(), PrintSelf(), ReadXMLAttributes(), vtkMRMLVolumeHeaderlessStorageNode(), and WriteXML().

char* vtkMRMLVolumeHeaderlessStorageNode::WriteFileFormat [protected]

Reimplemented from vtkMRMLStorageNode.

Referenced by WriteData().

The documentation for this class was generated from the following files:

Libs/MRML/vtkMRMLVolumeHeaderlessStorageNode.h
Libs/MRML/vtkMRMLVolumeHeaderlessStorageNode.cxx

vtkMRMLVolumeHeaderlessStorageNode Class Reference

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation