autoSlicerTracto2regions Namespace Reference

Variables
tuple	cont = os.walk('.')
tuple	contRM = os.walk('.')
tuple	d = cont.next()
list	dirs = d[1]
list	dirsRM = dRM[1]
tuple	dRM = contRM.next()
tuple	dwis = glob.glob('*.dwi')
tuple	fullDir = os.getcwd()
tuple	isDir = os.access(tmpD, os.F_OK)
tuple	pars = glob.glob('*.in')
tuple	ret = os.system(sys.executable + ' ' + rootA + '/' + 'StochasticTractoGraphyClusterSlicerDaemonFiles.py ' + str(sys.argv[1]) + ' 18943 ' + fullDir + '/' + pars[0] + ' ' + fullDir + '/' + dwis[0] + ' ' + fullDir + '/' + rois[s] + ' ' + fullDir + '/' + rois[s+1])
tuple	rois = glob.glob('*.roi')
tuple	rootA = os.path.abspath(os.path.dirname(sys.argv[0]))
list	tmpD = rois[s]
string	tmpF = './'
tuple	wmas = glob.glob('*.wm')

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Variable Documentation

tuple autoSlicerTracto2regions::cont = os.walk('.')

tuple autoSlicerTracto2regions::contRM = os.walk('.')

tuple autoSlicerTracto2regions::d = cont.next()

Referenced by qMRMLNodeFactoryButton::action(), qCTKDynamicSpacer::activate(), qSlicermiAnnotationModuleWidget::AddAngleCompleted(), qVTKCommandOptions::addArgument(), qMRMLSortFilterProxyModel::addAttribute(), qMRMLNodeSelector::addAttribute(), qMRMLNodeComboBox::addAttribute(), qVTKCommandOptions::addBooleanArgument(), qVTKObjectEventsObserver::addConnection(), qVTKCommandOptions::addDeprecatedArgument(), vtkSlicermiAnnotationModuleLogic::AddFiducialWidget(), qSlicerModulePanel::addModule(), qSlicerModuleSelectorWidget::addModules(), qMRMLNodeSelector::addNode(), qMRMLNodeComboBox::addNode(), qMRMLNodeTreeSelector::addNodeInternal(), RectMatrixRowCol::AddScaled(), vtkSlicerModelHierarchyWidget::AllVisibilityCallback(), qSlicermiAnnotationModuleWidget::annotationCoordinateChanged(), qSlicermiAnnotationModuleWidget::annotationTextChanged(), vtkCommandLineModuleLogic::ApplyTask(), vtkSlicerCLIModuleLogic::ApplyTask(), qMRMLLinearTransformSlider::applyTransformation(), BitReverse(), qVTKObjectEventsObserver::blockAllConnection(), qVTKObjectEventsObserver::blockAllConnections(), qVTKObjectEventsObserver::blockConnection(), qVTKObjectEventsObserver::blockConnectionRecursive(), qVTKConnection::BreakConnection(), vtkImageGCR::brent(), vtkTransRectalFiducialCalibrationAlgo::CalculateCircleCenter(), qCTKRangeWidget::changeMaximumValue(), qCTKRangeWidget::changeMinimumValue(), qCTKSliderSpinBoxWidget::changeValue(), qMRMLExtraItemsHelper::child(), qMRMLExtraItemsHelper::childCount(), qMRMLExtraItemsHelper::childIndex(), Cholesky(), qCTKAddRemoveComboBox::clear(), qSlicerCoreApplication::clearSettings(), qCTKCollapsibleButton::collapse(), qCTKCollapsibleWidget2::collapse(), BaseMatrix::columns(), ProstateNavMath::ComputePermutationFromOrientation(), vtkSlicerVolumeTextureMapper3D::ComputePolygons(), ConstRealStarStar::ConstRealStarStar(), qMRMLTransformSliders::coordinateReference(), vtkEMSegmentLogic::CopyTreeDataToSegmenter(), qCTKAddRemoveComboBox::count(), countFloatsInString(), qMRMLNodeFactory::createNode(), qSlicerCLIModule::createWidgetRepresentation(), qCTKAddRemoveComboBox::currentIndex(), qMRMLNodeSelector::currentNode(), qMRMLNodeComboBox::currentNode(), qMRMLTreeProxyModel::data(), qMRMLSceneModel::data(), qMRMLVariantArrayItemHelper::data(), qMRMLAbstractNodeItemHelper::data(), qMRMLAbstractSceneItemHelper::data(), qMRMLSceneFactoryWidget::deleteNode(), qMRMLNodeFactoryButton::deleteRandomNode(), qMRMLSceneFactoryWidget::deleteScene(), qSlicermiAnnotationModuleWidget::deleteSelectedButtonClicked(), qVTKCommandOptions::deprecatedArgument(), SourceTransformRemapOf< DATA, 3, PRECISION, SOURCE >::Describe(), SourceTransformRemapOf< DATA, 2, PRECISION, SOURCE >::Describe(), qSlicerCoreApplication::disableSettings(), RectMatrixRowCol::Divide(), vtkSlicerImageCrossHair2D::DrawCursor(), qMRMLTreeProxyModel::dropMimeData(), qMRMLNodeComboBox::emitCurrentNodeChanged(), qMRMLNodeComboBox::emitNodesAboutToBeRemoved(), qMRMLNodeComboBox::emitNodesAdded(), qVTKObjectEventsObserver::enableAll(), qSlicerCLILoadableModule::entryPoint(), qVTKConnection::EstablishConnection(), BandLUMatrix::even_exchanges(), CroutMatrix::even_exchanges(), qCTKTreeComboBox::eventFilter(), vtkPreciseHyperStreamline::Execute(), qVTKConnection::Execute(), qCTKMenuButton::extraMenu(), qMRMLAbstractItemHelper::factory(), qSlicerModuleManager::factoryManager(), qSlicerCoreIOManager::fileTypeFromExtension(), qMRMLSortFilterProxyModel::filterAcceptsRow(), vtkSlicerColorLogic::FindColorFiles(), qVTKObjectEventsObserver::findConnection(), qCTKAddRemoveComboBox::findData(), qCTKAddRemoveComboBox::findText(), qMRMLTreeProxyModel::flags(), qMRMLSceneModel::flags(), qMRMLVariantArrayItemHelper::flags(), qMRMLAbstractNodeItemHelper::flags(), qVTKRenderView::forceRender(), qCTKSlider::fromDoubleToInteger(), qMRMLSceneFactoryWidget::generateNode(), vtkPETCTFusionPlots::GeneratePlot(), qMRMLNodeFactoryButton::generateRandomNode(), qMRMLSceneFactoryWidget::generateScene(), SourceTransformContrastOf< DATA, 3, PRECISION, SOURCE >::Get(), SourceTransformContrastOf< DATA, 2, PRECISION, SOURCE >::Get(), qSlicermiAnnotationModuleWidget::getAnnotationIconName(), getDoubleString(), vtkSlicermiAnnotationModuleLogic::GetFiducialWidget(), qVTKConnection::getShortDescription(), vtkUserTagTable::GetUserTagValue(), qSlicerCoreApplication::handlePreApplicationCommandLineArguments(), qMRMLTreeProxyModel::hasChildren(), qMRMLSceneModel::hasChildren(), qMRMLExtraItemsHelper::hasChildren(), qMRMLItemModel::hasChildren(), qCTKSliderSpinBoxWidget::hasTracking(), qCTKRangeWidget::hasTracking(), qCTKDoubleSlider::hasTracking(), qCTKDoubleRangeSlider::hasTracking(), qVTKCommandOptions::help(), vtkMeshQualityExtended::HexAngleOutOfBounds(), vtkMeshQualityExtended::HexEdgeCollapse(), qCTKTreeComboBox::hidePopup(), qCTKMenuButton::hitButton(), qMRMLTreeProxyModel::index(), qMRMLSceneModel::index(), qMRMLItemModel::index(), qVTKCommandOptions::indexOfLastParsedArgument(), qSlicerCommandOptions::initialize(), qSlicerCoreCommandOptions::initialize(), qSlicerCoreApplication::initialize(), InitializeThresholds(), qCTKCollapsibleButton::initStyleOption(), qCTKAddRemoveComboBox::insertItem(), qCTKAddRemoveComboBox::insertItems(), qSlicerModuleFactoryManager::instantiateAllModules(), qSlicerModuleFactoryManager::instantiateModule(), qSlicerModuleFactoryManager::instantiateModules(), qCTKSliderSpinBoxWidget::isAutoSpinBoxWidth(), qCTKRangeWidget::isAutoSpinBoxWidth(), qVTKConnection::isBlocked(), qVTKConnection::isEnabled(), qVTKConnection::isEqual(), qVTKConnection::IsEqual(), qSlicerModuleManager::isLoaded(), qSlicerModuleFactoryManager::isRegistered(), qMRMLTreeProxyModel::item(), qMRMLSceneModel::item(), qCTKAddRemoveComboBox::itemData(), qMRMLTransformProxyModel::itemFactory(), qMRMLSceneModel::itemFactory(), qCTKAddRemoveComboBox::itemText(), vtkMRMLSliceNode::JumpSliceByOffsetting(), vtkSlicerModuleLogic::LoadDefaultParameterSets(), vtkPharmacokineticsLogic::LoadDoubleArrayNodeFromFile(), qSlicerModuleManager::loadModule(), qSlicermiAnnotationModuleWidget::lockSelectedButtonClicked(), qSlicerAbstractModuleWidget::logic(), qSlicerAbstractModule::logic(), main(), vtkEdgeGradient::MakeImageData(), qMRMLTreeProxyModel::mapFromSource(), qMRMLTreeProxyModel::mapToSource(), qVTKAbstractMatrixWidget::matrix(), qCTKCollapsibleButton::minimumSizeHint(), qSlicerModuleManager::module(), qSlicerModuleFactoryManager::moduleName(), qSlicerModuleFactoryManager::moduleNames(), qSlicerModuleFactoryManager::moduleTitle(), qCTKRangeSlider::mouseMoveEvent(), qCTKRangeSlider::mousePressEvent(), qCTKMenuButton::mousePressEvent(), qCTKRangeSlider::mouseReleaseEvent(), qSlicermiAnnotationModuleWidget::moveDownSelected(), qSlicermiAnnotationModuleWidget::moveUpSelected(), qMRMLAbstractNodeItemHelper::mrmlNode(), qMRMLSceneFactoryWidget::mrmlScene(), qMRMLNodeComboBox::mrmlScene(), qMRMLVariantArrayItemHelper::mrmlScene(), qMRMLAbstractSceneItemHelper::mrmlScene(), qMRMLNodeFactoryButton::mrmlScene(), RectMatrixRowCol::Negate(), qMRMLNodeSelector::node(), qMRMLNodeComboBox::nodeCount(), qMRMLNodeSelector::nodeIdSelected(), vtkSlicerIGTDemoLogic::Normalize(), qMRMLVariantArrayItemHelper::object(), qMRMLAbstractNodeItemHelper::object(), qMRMLAbstractSceneItemHelper::object(), qMRMLNodeSelector::onAdd(), qCTKButtonGroup::onButtonClicked(), qCTKButtonGroup::onButtonPressed(), qMRMLNodeFactoryButton::onClick(), qCTKTreeComboBox::onCollapsed(), qSlicerTransformsModuleWidget::onCoordinateReferenceButtonPressed(), qSlicermiAnnotationModuleWidget::onCreateMeasurementAngleButtonToggled(), qSlicermiAnnotationModuleWidget::onCreateMeasurementRulerButtonClicked(), qSlicermiAnnotationModuleWidget::onGenerateReportButtonClicked(), qCTKModelTester::onHeaderDataChanged(), qSlicerTransformsModuleWidget::onIdentityButtonPressed(), qSlicerTransformsModuleWidget::onInvertButtonPressed(), qMRMLTransformSliders::onISSliderPositionChanged(), qMRMLNodeSelector::onItemAboutToBeRemoved(), qMRMLNodeSelector::onItemRemoved(), qCTKModelTester::onItemsAboutToBeInserted(), qCTKModelTester::onItemsAboutToBeRemoved(), qSlicermiAnnotationModuleWidget::onItemSelectionChanged(), qCTKModelTester::onItemsInserted(), qCTKModelTester::onItemsRemoved(), qCTKModelTester::onLayoutAboutToBeChanged(), qCTKModelTester::onLayoutChanged(), qMRMLTransformSliders::onLRSliderPositionChanged(), qMRMLTransformSliders::onMaximumChanged(), qCTKDoubleRangeSlider::onMaxPosChanged(), qCTKDoubleRangeSlider::onMaxValueChanged(), qMRMLTransformSliders::onMinimumChanged(), qCTKDoubleRangeSlider::onMinPosChanged(), qCTKDoubleRangeSlider::onMinValueChanged(), qMRMLSceneModel::onMRMLSceneNodeAboutToBeAdded(), qMRMLSceneModel::onMRMLSceneNodeAboutToBeRemoved(), qMRMLNodeSelector::onMRMLSceneNodeAboutToBeRemoved(), qMRMLSceneModel::onMRMLSceneNodeAdded(), qMRMLNodeSelector::onMRMLSceneNodeAdded(), qMRMLSceneModel::onMRMLSceneNodeRemoved(), qMRMLLinearTransformSlider::onMRMLTransformNodeModified(), qSlicerTransformsModuleWidget::onMRMLTransformNodeModified(), qMRMLEventLoggerWidget::onNodeAddedEvent(), qMRMLEventLoggerWidget::onNodeRemovedEvent(), qSlicerTransformsModuleWidget::onNodeSelected(), qMRMLTransformSliders::onPASliderPositionChanged(), qSlicermiAnnotationModuleWidget::onPauseButtonToggled(), qCTKDoubleRangeSlider::onPositionsChanged(), qCTKRangeSlider::onRangeChanged(), qMRMLNodeSelector::onRemove(), qCTKAddRemoveComboBox::onRowsAboutToBeRemoved(), qCTKAddRemoveComboBox::onRowsInserted(), qCTKAddRemoveComboBox::onRowsRemoved(), qSlicermiAnnotationModuleWidget::onSaveMRMLSceneButtonClicked(), qSlicermiAnnotationModuleWidget::onScreenShotButtonClicked(), qCTKDoubleSlider::onSliderMoved(), qSlicermiAnnotationModuleWidget::onStickyNodeButtonClicked(), qCTKDoubleSlider::onValueChanged(), qCTKDoubleRangeSlider::onValuesChanged(), qSlicerMainWindowCore::onWindowPythonInteractorActionTriggered(), RectMatrixRowCol::operator*(), CongealGroupPhasedOf< RECIPIE >::Optimize_BruteForce(), Optimize_RandomWalk(), qCTKRangeSlider::paintEvent(), qCTKCollapsibleButton::paintEvent(), qCTKMenuButton::paintEvent(), qMRMLTreeProxyModel::parent(), qMRMLSceneModel::parent(), qVTKCommandOptions::parse(), qCTKModelTester::persistentModelIndexes(), qMRMLNodeSelector::populateItems(), qMRMLSceneModel::postItems(), qMRMLSceneModelItemHelperFactory::postItems(), qMRMLSceneModel::preItems(), qMRMLSceneModelItemHelperFactory::preItems(), qVTKCommandOptions::printAdditionalInfo(), qMRMLNodeSelector::printAdditionalInfo(), qSlicerModuleManager::printAdditionalInfo(), qSlicerModuleFactoryManager::printAdditionalInfo(), qSlicerCoreIOManager::printAdditionalInfo(), qVTKObjectEventsObserver::printAdditionalInfo(), qVTKConnection::printAdditionalInfo(), qCTKAddRemoveComboBox::printAdditionalInfo(), vtkSlicerDataGUI::ProcessGUIEvents(), qSlicermiAnnotationModuleWidget::propertyAccepted(), qSlicermiAnnotationModuleWidget::propertyEditButtonClicked(), qSlicermiAnnotationModuleWidget::propertyRestored(), qMRMLProxyItemHelper::proxy(), vtkSlicerApplicationGUI::PythonCommand(), vtkSlicerApplicationGUI::PythonConsole(), qCTKAddRemoveComboBox::qCTKAddRemoveComboBox(), qCTKRangeWidget::qCTKRangeWidget(), qCTKSliderSpinBoxWidget::qCTKSliderSpinBoxWidget(), qCTKTreeComboBox::qCTKTreeComboBox(), qMRMLAbstractItemHelper::qMRMLAbstractItemHelper(), qMRMLEventLogger::qMRMLEventLogger(), qMRMLEventLoggerWidget::qMRMLEventLoggerWidget(), qMRMLExtraItemsHelper::qMRMLExtraItemsHelper(), qMRMLNodeComboBox::qMRMLNodeComboBox(), qMRMLNodeSelector::qMRMLNodeSelector(), qMRMLTransformSliders::qMRMLTransformSliders(), qMRMLVolumeThresholdWidget::qMRMLVolumeThresholdWidget(), qMRMLWindowLevelWidget::qMRMLWindowLevelWidget(), qSlicerApplication::qSlicerApplication(), qSlicerCLIModuleWidget::qSlicerCLIModuleWidget(), qSlicerCoreApplication::qSlicerCoreApplication(), qSlicerMainWindow::qSlicerMainWindow(), qSlicerMainWindowCore::qSlicerMainWindowCore(), qSlicerMeasurementsAngleWidget::qSlicerMeasurementsAngleWidget(), qSlicerMeasurementsRulerWidget::qSlicerMeasurementsRulerWidget(), qSlicerModulePanel::qSlicerModulePanel(), qSlicerModuleSelectorWidget::qSlicerModuleSelectorWidget(), qSlicerScalarVolumeDisplayWidget::qSlicerScalarVolumeDisplayWidget(), vtkMeshQualityExtended::QuadAngleOutOfBounds(), vtkMeshQualityExtended::QuadEdgeCollapse(), qVTKCommandOptions::qVTKCommandOptions(), qVTKConnection::qVTKConnection(), qVTKObjectEventsObserver::qVTKObjectEventsObserver(), qVTKRenderView::qVTKRenderView(), vtkMRMLAnnotationLinesNode::ReadXMLAttributes(), vtkMRMLAnnotationControlPointsNode::ReadXMLAttributes(), vtkMRMLEMSTreeParametersNode::ReadXMLAttributes(), vtkMRMLEMSTreeParametersLeafNode::ReadXMLAttributes(), vtkMRMLEMSTreeNode::ReadXMLAttributes(), RealStarStar::RealStarStar(), qSlicerModuleFactoryManager::registerAllModules(), qSlicerModuleFactoryManager::registerFactory(), qSlicerCoreModuleFactory::registerItems(), qSlicerLoadableModuleFactory::registerItems(), qSlicerModuleFactoryManager::registerModules(), qVTKCommandOptions::remainingArguments(), qVTKObjectEventsObserver::removeConnection(), vtkSlicermiAnnotationModuleLogic::RemoveFiducialWidget(), qCTKAddRemoveComboBox::removeItem(), qSlicerModuleSelectorWidget::removeModule(), qSlicerModulePanel::removeModule(), qMRMLTransformSliders::reset(), qCTKSlider::reset(), qVTKRenderView::resetCamera(), qVTKObjectTest::resetSlotCalls(), qMRMLTransformSliders::resetUnactiveSliders(), qMRMLTreeProxyModel::rowCount(), qMRMLSceneModel::rowCount(), ScalingValues::ScalingValues(), qVTKRenderView::scheduleRender(), qSlicermiAnnotationModuleWidget::selectedAllButtonClicked(), qSlicermiAnnotationModuleWidget::selectRowByIndex(), SourceTransformContrastOf< DATA, 3, PRECISION, SOURCE >::Set(), SourceTransformContrastOf< DATA, 2, PRECISION, SOURCE >::Set(), qMRMLNodeFactoryButton::setAction(), qCTKDynamicSpacer::setActiveSizePolicy(), qSlicerVolumesModuleWidget::setActiveVolumeNode(), qMRMLNodeComboBox::setAddEnabled(), qCTKAddRemoveComboBox::setAddEnabled(), qVTKObjectEventsObserver::setAllEnabled(), qSlicerAbstractModule::setAppLogic(), qCTKSliderSpinBoxWidget::setAutoSpinBoxWidth(), qCTKRangeWidget::setAutoSpinBoxWidth(), qVTKRenderView::setBackgroundColor(), qVTKConnection::setBlocked(), qVTKConnection::SetBlocked(), qSlicerCamerasModuleWidget::setCameraToCurrentView(), qCTKAddRemoveComboBox::setComboBox(), qMRMLTransformSliders::setCoordinateReference(), qMRMLMatrixWidget::setCoordinateReference(), qMRMLLinearTransformSlider::setCoordinateReference(), qVTKRenderView::setCornerAnnotationText(), qCTKAddRemoveComboBox::setCurrentIndex(), qMRMLTreeProxyModel::setData(), qMRMLSceneModel::setData(), qMRMLAbstractNodeItemHelper::setData(), qCTKSliderSpinBoxWidget::setDecimals(), qCTKRangeWidget::setDecimals(), qMRMLNodeComboBox::setEditEnabled(), qCTKAddRemoveComboBox::setEditEnabled(), qCTKAddRemoveComboBox::setEmptyText(), qVTKConnection::setEnabled(), qVTKConnection::SetEstablished(), qCTKMenuButton::setExtraMenu(), qMRMLSortFilterProxyModel::setHideChildNodeTypes(), qMRMLNodeSelector::setHideChildNodeTypes(), qCTKDynamicSpacer::setInactiveSizePolicy(), vtkITKNewOtsuThresholdImageFilter::SetInsideValue(), qVTKRenderView::setInteractor(), qCTKAddRemoveComboBox::setItemData(), qCTKAddRemoveComboBox::setItemText(), qSlicerAbstractModuleWidget::setLogic(), qVTKAbstractMatrixWidget::setMatrixInternal(), qCTKSliderSpinBoxWidget::setMaximum(), qCTKRangeWidget::setMaximum(), qCTKDoubleSlider::setMaximum(), qCTKDoubleRangeSlider::setMaximum(), qCTKRangeSlider::setMaximumPosition(), qCTKDoubleRangeSlider::setMaximumPosition(), qCTKRangeWidget::setMaximumValue(), qCTKRangeSlider::setMaximumValue(), qCTKDoubleRangeSlider::setMaximumValue(), qCTKSliderSpinBoxWidget::setMinimum(), qCTKRangeWidget::setMinimum(), qCTKDoubleSlider::setMinimum(), qCTKDoubleRangeSlider::setMinimum(), qCTKRangeSlider::setMinimumPosition(), qCTKDoubleRangeSlider::setMinimumPosition(), qCTKRangeWidget::setMinimumValue(), qCTKRangeSlider::setMinimumValue(), qCTKDoubleRangeSlider::setMinimumValue(), qCTKModelTester::setModel(), qSlicerModulePanel::setModule(), qMRMLNodeSelector::setMRMLNodeFactory(), qMRMLSceneModel::setMRMLScene(), qMRMLNodeSelector::setMRMLScene(), qMRMLNodeComboBox::setMRMLScene(), qMRMLEventLoggerWidget::setMRMLScene(), qSlicerCoreApplication::setMRMLScene(), qSlicerAbstractModule::setMRMLScene(), qMRMLNodeFactoryButton::setMRMLScene(), qMRMLTransformSliders::setMRMLTransformNode(), qMRMLMatrixWidget::setMRMLTransformNode(), qMRMLLinearTransformSlider::setMRMLTransformNode(), qSlicerScalarVolumeDisplayWidget::setMRMLVolumeNode(), qMRMLSortFilterProxyModel::setNodeTypes(), qMRMLNodeSelector::setNodeTypes(), qMRMLNodeComboBox::setNoneEnabled(), qCTKDoubleSlider::setOrientation(), qCTKDoubleRangeSlider::setOrientation(), vtkITKNewOtsuThresholdImageFilter::SetOutsideValue(), qVTKConnection::SetParameters(), qVTKObjectEventsObserver::setParent(), qCTKRangeSlider::setPositions(), qCTKDoubleRangeSlider::setPositions(), qMRMLSceneModel::setPostItems(), qMRMLSceneModelItemHelperFactory::setPostItems(), qCTKSliderSpinBoxWidget::setPrefix(), qCTKRangeWidget::setPrefix(), qMRMLSceneModel::setPreItems(), qMRMLSceneModelItemHelperFactory::setPreItems(), qMRMLTransformSliders::setRange(), qCTKSliderSpinBoxWidget::setRange(), qCTKRangeWidget::setRange(), qCTKDoubleSlider::setRange(), qCTKDoubleRangeSlider::setRange(), qCTKSlider::setRange(), qMRMLNodeComboBox::setRemoveEnabled(), qCTKAddRemoveComboBox::setRemoveEnabled(), qSlicerWidget::setScrollAreaAsParentContainer(), qMRMLSortFilterProxyModel::setShowChildNodeTypes(), qMRMLNodeSelector::setShowChildNodeTypes(), qMRMLSortFilterProxyModel::setShowHidden(), qMRMLTransformSliders::setSingleStep(), qCTKSliderSpinBoxWidget::setSingleStep(), qCTKRangeWidget::setSingleStep(), qCTKDoubleSlider::setSingleStep(), qCTKDoubleRangeSlider::setSingleStep(), qCTKSlider::setSingleStep(), qCTKDoubleSlider::setSliderPosition(), qMRMLTreeProxyModel::setSourceModel(), qCTKRangeWidget::setSpinBoxAlignment(), qCTKSliderSpinBoxWidget::setSuffix(), qCTKRangeWidget::setSuffix(), qCTKSliderSpinBoxWidget::setTickInterval(), qCTKRangeWidget::setTickInterval(), qCTKDoubleSlider::setTickInterval(), qCTKDoubleRangeSlider::setTickInterval(), qSlicerCoreApplication::settings(), qSlicerApplication::setTopLevelWidgetsVisible(), qSlicerApplication::setTopLevelWidgetVisible(), qCTKSliderSpinBoxWidget::setTracking(), qCTKRangeWidget::setTracking(), qCTKDoubleSlider::setTracking(), qCTKDoubleRangeSlider::setTracking(), qMRMLTransformSliders::setTypeOfTransform(), qMRMLLinearTransformSlider::setTypeOfTransform(), qSlicerVolumesModuleWidget::setup(), qSlicerTractographyFiducialSeedingModuleWidget::setup(), qSlicerWelcomeModuleWidget::setup(), qSlicermiAnnotationModuleWidget::setup(), qSlicerMeasurementsModuleWidget::setup(), qSlicerTransformsModuleWidget::setup(), qSlicerCamerasModuleWidget::setup(), qSlicerCLIModuleWidget::setup(), qSlicerCLIModule::setup(), qSlicerMainWindow::setupMenuActions(), qCTKSliderSpinBoxWidget::setValue(), qCTKDoubleSlider::setValue(), vtkSlicerParameterWidget::SetValueForWidget(), qCTKRangeSlider::setValues(), qSlicerWidget::setWindowFlags(), qSlicerCLIModule::setXmlModuleDescription(), qVTKConnection::shortDescription(), qCTKMenuButton::showExtraMenu(), qCTKCollapsibleButton::sizeHint(), qSlicermiAnnotationModuleWidget::StartAddingFiducials(), qCTKSliderSpinBoxWidget::startChanging(), qCTKRangeWidget::startChanging(), qSlicermiAnnotationModuleWidget::StopAddingFiducials(), qCTKSliderSpinBoxWidget::stopChanging(), qCTKRangeWidget::stopChanging(), BaseMatrix::submatrix(), MatrixRowCol::SubRowCol(), RectMatrixRowCol::SumSquare(), qVTKObjectTest::test(), qCTKModelTester::testModel(), qCTKModelTester::testModelIndex(), qCTKModelTester::testParent(), qCTKModelTester::testPersistentModelIndex(), vtkMeshQualityExtended::TetAngleOutOfBounds(), vtkMeshQualityExtended::TetEdgeCollapse(), Matrix::trace(), tred3(), qCTKDoubleSlider::triggerAction(), qCTKDoubleRangeSlider::triggerAction(), trymatd(), trymath(), qSlicerModuleFactoryManager::uninstantiateModule(), qSlicerModuleManager::unLoadModule(), vtkSlicermiAnnotationModuleLogic::Update3DFiducial(), qSlicermiAnnotationModuleWidget::updateAnnotationTable(), qSlicermiAnnotationModuleWidget::updateAnnotationText(), vtkPETCTFusionGUI::UpdateGUIFromMRML(), qMRMLMatrixWidget::updateMatrix(), qSlicermiAnnotationModuleWidget::updateValue(), qSlicerTractographyFiducialSeedingModuleWidget::updateWidgetFromMRML(), qMRMLWindowLevelWidget::updateWidgetFromMRML(), qMRMLVolumeThresholdWidget::updateWidgetFromMRML(), qSlicermiAnnotationModuleWidget::visibleSelectedButtonClicked(), ProstateNavMath::VMagnitudeM(), vtkResliceFloor(), vtkResliceRound(), vtkSlicerFixedPointVolumeRayCastMapperComputeGradients(), qSlicerAbstractModule::widgetRepresentation(), and RectMatrixRowCol::Zero().

list autoSlicerTracto2regions::dirs = d[1]

Referenced by vtkMRMLVolumeNode::GetIJKToRASDirectionMatrix(), vtkMRMLVolumeNode::SetIJKToRASDirectionMatrix(), and vtkSlicerSliceLayerLogic::UpdateGlyphs().

list autoSlicerTracto2regions::dirsRM = dRM[1]

tuple autoSlicerTracto2regions::dRM = contRM.next()

tuple autoSlicerTracto2regions::dwis = glob.glob('*.dwi')

tuple autoSlicerTracto2regions::fullDir = os.getcwd()

tuple autoSlicerTracto2regions::isDir = os.access(tmpD, os.F_OK)

tuple autoSlicerTracto2regions::pars = glob.glob('*.in')

tuple autoSlicerTracto2regions::ret = os.system(sys.executable + ' ' + rootA + '/' + 'StochasticTractoGraphyClusterSlicerDaemonFiles.py ' + str(sys.argv[1]) + ' 18943 ' + fullDir + '/' + pars[0] + ' ' + fullDir + '/' + dwis[0] + ' ' + fullDir + '/' + rois[s] + ' ' + fullDir + '/' + rois[s+1])

Referenced by vtkCacheManager::AddCachePathToFilename(), vtkCommandLineModuleLogic::Apply(), vtkSlicerCLIModuleLogic::Apply(), vtkSlicerNodeSelectorVolumeRenderingWidget::CheckAdditionalConditions(), vtkSlicerVolumeRenderingFactory::CreateInstance(), vtkMRMLScene::CreateNodeByClass(), vtkMRMLAnnotationTextDisplayNode::CreateNodeInstance(), vtkMRMLAnnotationStorageNode::CreateNodeInstance(), vtkMRMLAnnotationStickyNode::CreateNodeInstance(), vtkMRMLAnnotationRulerStorageNode::CreateNodeInstance(), vtkMRMLAnnotationRulerNode::CreateNodeInstance(), vtkMRMLAnnotationPointDisplayNode::CreateNodeInstance(), vtkMRMLAnnotationNode::CreateNodeInstance(), vtkMRMLAnnotationLinesStorageNode::CreateNodeInstance(), vtkMRMLAnnotationLinesNode::CreateNodeInstance(), vtkMRMLAnnotationLineDisplayNode::CreateNodeInstance(), vtkMRMLAnnotationFiducialsStorageNode::CreateNodeInstance(), vtkMRMLAnnotationFiducialNode::CreateNodeInstance(), vtkMRMLAnnotationDisplayNode::CreateNodeInstance(), vtkMRMLAnnotationControlPointsStorageNode::CreateNodeInstance(), vtkMRMLAnnotationControlPointsNode::CreateNodeInstance(), vtkMRMLAnnotationAngleStorageNode::CreateNodeInstance(), vtkMRMLAnnotationAngleNode::CreateNodeInstance(), vtkMRMLVolumeRendering1ParametersNode::CreateNodeInstance(), vtkMRMLVolumeRenderingScenarioNode::CreateNodeInstance(), vtkMRMLVolumeRenderingParametersNode::CreateNodeInstance(), vtkMRMLUDPServerNode::CreateNodeInstance(), vtkMRMLTractographyFiducialSeedingNode::CreateNodeInstance(), vtkMRMLLabelStatisticsNode::CreateNodeInstance(), vtkMRMLSlicerWelcomeNode::CreateNodeInstance(), vtkMRMLSlicerDaemonNode::CreateNodeInstance(), vtkMRMLScriptedModuleNode::CreateNodeInstance(), vtkMRMLQueryAtlasNode::CreateNodeInstance(), vtkMRMLRobotNode::CreateNodeInstance(), vtkMRMLRobotDisplayNode::CreateNodeInstance(), vtkMRMLProstateNavManagerNode::CreateNodeInstance(), vtkMRMLTransRectalProstateRobotNode::CreateNodeInstance(), vtkMRMLTransPerinealProstateTemplateNode::CreateNodeInstance(), vtkMRMLTransPerinealProstateRobotNode::CreateNodeInstance(), vtkMRMLBrpRobotCommandNode::CreateNodeInstance(), vtkMRMLPharmacokineticsCurveAnalysisNode::CreateNodeInstance(), vtkMRMLPETCTFusionNode::CreateNodeInstance(), vtkMRMLImageMetaListNode::CreateNodeInstance(), vtkMRMLIGTLTrackingDataQueryNode::CreateNodeInstance(), vtkMRMLIGTLTrackingDataBundleNode::CreateNodeInstance(), vtkMRMLIGTLQueryNode::CreateNodeInstance(), vtkMRMLIGTLConnectorNode::CreateNodeInstance(), vtkMRMLModelTransformNode::CreateNodeInstance(), vtkMRMLModelMirrorNode::CreateNodeInstance(), vtkMRMLIA_FEMeshNode::CreateNodeInstance(), vtkMRMLNullDisplayNode::CreateNodeInstance(), vtkMRMLFiniteElementMeshNode::CreateNodeInstance(), vtkMRMLFiniteElementMeshDisplayNode::CreateNodeInstance(), vtkMRMLFiniteElementImageNode::CreateNodeInstance(), vtkMRMLFiniteElementBuildingBlockNode::CreateNodeInstance(), vtkMRMLFiniteElementBuildingBlockDisplayNode::CreateNodeInstance(), vtkMRMLFESurfaceNode::CreateNodeInstance(), vtkMRMLMeasurementsRulerNode::CreateNodeInstance(), vtkMRMLMeasurementsNode::CreateNodeInstance(), vtkMRMLMeasurementsAngleNode::CreateNodeInstance(), vtkMRMLIntensityNormalizationFilterNode::CreateNodeInstance(), vtkMRMLGradientAnisotropicDiffusionFilterNode::CreateNodeInstance(), vtkMRMLTimeSeriesBundleNode::CreateNodeInstance(), vtkMRMLFetchMINode::CreateNodeInstance(), vtkMRMLEMSWorkingDataNode::CreateNodeInstance(), vtkMRMLEMSVolumeCollectionNode::CreateNodeInstance(), vtkMRMLEMSTreeParametersParentNode::CreateNodeInstance(), vtkMRMLEMSTreeParametersNode::CreateNodeInstance(), vtkMRMLEMSTreeParametersLeafNode::CreateNodeInstance(), vtkMRMLEMSTreeNode::CreateNodeInstance(), vtkMRMLEMSTemplateNode::CreateNodeInstance(), vtkMRMLEMSTargetNode::CreateNodeInstance(), vtkMRMLEMSSegmenterNode::CreateNodeInstance(), vtkMRMLEMSNode::CreateNodeInstance(), vtkMRMLEMSGlobalParametersNode::CreateNodeInstance(), vtkMRMLEMSegmentNode::CreateNodeInstance(), vtkMRMLEMSCollectionNode::CreateNodeInstance(), vtkMRMLEMSAtlasNode::CreateNodeInstance(), vtkMRMLChangeTrackerNode::CreateNodeInstance(), vtkMRMLAtlasCreatorNode::CreateNodeInstance(), vtkMRMLCommandLineModuleNode::CreateNodeInstance(), vtkMRMLXYPlotManagerNode::CreateNodeInstance(), vtkMRMLVolumePropertyStorageNode::CreateNodeInstance(), vtkMRMLVolumePropertyNode::CreateNodeInstance(), vtkMRMLVolumeHeaderlessStorageNode::CreateNodeInstance(), vtkMRMLVolumeArchetypeStorageNode::CreateNodeInstance(), vtkMRMLViewNode::CreateNodeInstance(), vtkMRMLVectorVolumeNode::CreateNodeInstance(), vtkMRMLVectorVolumeDisplayNode::CreateNodeInstance(), vtkMRMLUnstructuredGridStorageNode::CreateNodeInstance(), vtkMRMLUnstructuredGridNode::CreateNodeInstance(), vtkMRMLUnstructuredGridDisplayNode::CreateNodeInstance(), vtkMRMLTransformStorageNode::CreateNodeInstance(), vtkMRMLTensorVolumeNode::CreateNodeInstance(), vtkMRMLSnapshotClipNode::CreateNodeInstance(), vtkMRMLSliceNode::CreateNodeInstance(), vtkMRMLSliceCompositeNode::CreateNodeInstance(), vtkMRMLSelectionNode::CreateNodeInstance(), vtkMRMLSceneSnapshotNode::CreateNodeInstance(), vtkMRMLScalarVolumeNode::CreateNodeInstance(), vtkMRMLScalarVolumeDisplayNode::CreateNodeInstance(), vtkMRMLROINode::CreateNodeInstance(), vtkMRMLROIListNode::CreateNodeInstance(), vtkMRMLProceduralColorNode::CreateNodeInstance(), vtkMRMLPlotNode::CreateNodeInstance(), vtkMRMLPETProceduralColorNode::CreateNodeInstance(), vtkMRMLOrthogonalLinePlotNode::CreateNodeInstance(), vtkMRMLNRRDStorageNode::CreateNodeInstance(), vtkMRMLNonlinearTransformNode::CreateNodeInstance(), vtkMRMLModelStorageNode::CreateNodeInstance(), vtkMRMLModelNode::CreateNodeInstance(), vtkMRMLModelHierarchyNode::CreateNodeInstance(), vtkMRMLModelDisplayNode::CreateNodeInstance(), vtkMRMLLinearTransformNode::CreateNodeInstance(), vtkMRMLLayoutNode::CreateNodeInstance(), vtkMRMLLabelMapVolumeDisplayNode::CreateNodeInstance(), vtkMRMLInteractionNode::CreateNodeInstance(), vtkMRMLGridTransformNode::CreateNodeInstance(), vtkMRMLGlyphableVolumeSliceDisplayNode::CreateNodeInstance(), vtkMRMLGlyphableVolumeDisplayPropertiesNode::CreateNodeInstance(), vtkMRMLGlyphableVolumeDisplayNode::CreateNodeInstance(), vtkMRMLFreeSurferProceduralColorNode::CreateNodeInstance(), vtkMRMLFreeSurferModelStorageNode::CreateNodeInstance(), vtkMRMLFreeSurferModelOverlayStorageNode::CreateNodeInstance(), vtkMRMLFiducialListStorageNode::CreateNodeInstance(), vtkMRMLFiducialListNode::CreateNodeInstance(), vtkMRMLFiberBundleTubeDisplayNode::CreateNodeInstance(), vtkMRMLFiberBundleStorageNode::CreateNodeInstance(), vtkMRMLFiberBundleNode::CreateNodeInstance(), vtkMRMLFiberBundleLineDisplayNode::CreateNodeInstance(), vtkMRMLFiberBundleGlyphDisplayNode::CreateNodeInstance(), vtkMRMLDoubleArrayStorageNode::CreateNodeInstance(), vtkMRMLDoubleArrayNode::CreateNodeInstance(), vtkMRMLDiffusionWeightedVolumeNode::CreateNodeInstance(), vtkMRMLDiffusionWeightedVolumeDisplayNode::CreateNodeInstance(), vtkMRMLDiffusionTensorVolumeSliceDisplayNode::CreateNodeInstance(), vtkMRMLDiffusionTensorVolumeNode::CreateNodeInstance(), vtkMRMLDiffusionTensorVolumeDisplayNode::CreateNodeInstance(), vtkMRMLDiffusionTensorDisplayPropertiesNode::CreateNodeInstance(), vtkMRMLDiffusionImageVolumeNode::CreateNodeInstance(), vtkMRMLdGEMRICProceduralColorNode::CreateNodeInstance(), vtkMRMLCrosshairNode::CreateNodeInstance(), vtkMRMLColorTableStorageNode::CreateNodeInstance(), vtkMRMLColorTableNode::CreateNodeInstance(), vtkMRMLColorNode::CreateNodeInstance(), vtkMRMLClipModelsNode::CreateNodeInstance(), vtkMRMLCameraNode::CreateNodeInstance(), vtkMRMLBSplineTransformNode::CreateNodeInstance(), vtkMRMLArrayPlotNode::CreateNodeInstance(), vtkSlicerApplication::DisplayExitDialog(), qCTKTestApplication::exec(), qCTKAbstractPythonManager::executeString(), itk::TimeSeriesDatabaseHelper::LRUCache< unsigned long, CacheBlock >::format_str(), GenerateHistogram(), igtl::SetZFrameMessage::GetBodyPackSize(), igtl::MoveToMessage::GetBodyPackSize(), igtl::CoordinateMessage::GetBodyPackSize(), qVTKConnection::getShortDescription(), qCTKFittedTextBrowser::heightForWidth(), vtkCard::LoadString(), makesockaddr(), my_main(), vtkSlicerApplicationLogic::NetworkingThreaderCallback(), vtkMRMLAnnotationTextDisplayNode::New(), vtkMRMLAnnotationStorageNode::New(), vtkMRMLAnnotationStickyNode::New(), vtkMRMLAnnotationRulerStorageNode::New(), vtkMRMLAnnotationRulerNode::New(), vtkMRMLAnnotationPointDisplayNode::New(), vtkMRMLAnnotationNode::New(), vtkMRMLAnnotationLinesStorageNode::New(), vtkMRMLAnnotationLinesNode::New(), vtkMRMLAnnotationLineDisplayNode::New(), vtkMRMLAnnotationFiducialsStorageNode::New(), vtkMRMLAnnotationFiducialNode::New(), vtkMRMLAnnotationDisplayNode::New(), vtkMRMLAnnotationControlPointsStorageNode::New(), vtkMRMLAnnotationControlPointsNode::New(), vtkMRMLAnnotationAngleStorageNode::New(), vtkMRMLAnnotationAngleNode::New(), vtkMRMLVolumeRendering1ParametersNode::New(), vtkSlicerGPUVolumeTextureMapper3D::New(), vtkVolumeRenderingLogic::New(), vtkVolumeRenderingGUI::New(), vtkMRMLVolumeRenderingScenarioNode::New(), vtkMRMLVolumeRenderingParametersNode::New(), vtkSlicerVolumeTextureMapper3D::New(), vtkSlicerRayCastImageDisplayHelper::New(), vtkSlicerGPUVolumeMapper::New(), vtkSlicerGPUMultiVolumeMapper::New(), vtkMRMLUDPServerNode::New(), vtkMRMLTractographyFiducialSeedingNode::New(), vtkSlicerTractographyFiducialSeedingGUI::New(), vtkMRMLLabelStatisticsNode::New(), vtkLabelStatisticsLogic::New(), vtkLabelStatisticsGUI::New(), vtkSlicerWelcomeLogic::New(), vtkSlicerWelcomeGUI::New(), vtkMRMLSlicerWelcomeNode::New(), vtkSlicerDaemonLogic::New(), vtkSlicerDaemonGUI::New(), vtkMRMLSlicerDaemonNode::New(), vtkScriptedModuleLogic::New(), vtkScriptedModuleGUI::New(), vtkMRMLScriptedModuleNode::New(), vtkQueryAtlasLogic::New(), vtkQueryAtlasGUI::New(), vtkMRMLQueryAtlasNode::New(), vtkMRMLRobotNode::New(), vtkMRMLRobotDisplayNode::New(), vtkMRMLProstateNavManagerNode::New(), vtkMRMLTransRectalProstateRobotNode::New(), vtkMRMLTransPerinealProstateTemplateNode::New(), vtkMRMLTransPerinealProstateRobotNode::New(), vtkMRMLBrpRobotCommandNode::New(), vtkMRMLPharmacokineticsCurveAnalysisNode::New(), vtkPETCTFusionLogic::New(), vtkPETCTFusionGUI::New(), vtkMRMLPETCTFusionNode::New(), vtkMRMLImageMetaListNode::New(), vtkMRMLIGTLTrackingDataQueryNode::New(), vtkMRMLIGTLTrackingDataBundleNode::New(), vtkMRMLIGTLQueryNode::New(), vtkMRMLIGTLConnectorNode::New(), vtkNeuroNavGUI::New(), vtkModelTransformGUI::New(), vtkMRMLModelTransformNode::New(), vtkModelTransformLogic::New(), vtkModelMirrorGUI::New(), vtkMRMLModelMirrorNode::New(), vtkModelMirrorLogic::New(), vtkMRMLIA_FEMeshNode::New(), vtkIA_FEMeshLogic::New(), vtkIA_FEMeshGUI::New(), vtkMRMLNullDisplayNode::New(), vtkMRMLFiniteElementMeshNode::New(), vtkMRMLFiniteElementMeshDisplayNode::New(), vtkMRMLFiniteElementImageNode::New(), vtkMRMLFiniteElementBuildingBlockNode::New(), vtkMRMLFiniteElementBuildingBlockDisplayNode::New(), vtkMRMLFESurfaceNode::New(), vtkMRMLMeasurementsRulerNode::New(), vtkMRMLMeasurementsNode::New(), vtkMRMLMeasurementsAngleNode::New(), vtkMeasurementsLogic::New(), vtkMeasurementsGUI::New(), vtkMRMLIntensityNormalizationFilterNode::New(), vtkIntensityNormalizationFilterLogic::New(), vtkIntensityNormalizationFilterGUI::New(), vtkMRMLGradientAnisotropicDiffusionFilterNode::New(), vtkGradientAnisotropicDiffusionFilterLogic::New(), vtkGradientAnisotropicDiffusionFilterGUI::New(), vtkMRMLTimeSeriesBundleNode::New(), vtkFetchMIGUI::New(), vtkMRMLFetchMINode::New(), vtkFetchMILogic::New(), vtkEMSegmentMRMLManager::New(), vtkEMSegmentLogic::New(), vtkEMSegmentGUI::New(), vtkCTHandBoneClass::New(), vtkMRMLEMSWorkingDataNode::New(), vtkMRMLEMSVolumeCollectionNode::New(), vtkMRMLEMSTreeParametersParentNode::New(), vtkMRMLEMSTreeParametersNode::New(), vtkMRMLEMSTreeParametersLeafNode::New(), vtkMRMLEMSTreeNode::New(), vtkMRMLEMSTemplateNode::New(), vtkMRMLEMSTargetNode::New(), vtkMRMLEMSSegmenterNode::New(), vtkMRMLEMSNode::New(), vtkMRMLEMSGlobalParametersNode::New(), vtkMRMLEMSegmentNode::New(), vtkMRMLEMSCollectionNode::New(), vtkMRMLEMSAtlasNode::New(), vtkEMSegmentKWLogic::New(), vtkIndirectLookupTable::New(), vtkImageGraph::New(), vtkImageDrawObjects::New(), vtkImageCurveRegion::New(), vtkImageMeanIntensityNormalization::New(), vtkImageEMMarkov::New(), vtkImageEMLocalSuperClass::New(), vtkImageEMLocalSegmenter::New(), vtkImageEMLocalGenericClass::New(), vtkImageEMLocalClass::New(), vtkImageEMGenericClass::New(), vtkImageEMGeneral::New(), vtkImageEMAtlasSuperClass::New(), vtkImageEMAtlasSegmenter::New(), vtkImageEMAtlasClass::New(), vtkCommandLineModuleLogic::New(), vtkCommandLineModuleGUI::New(), vtkMRMLChangeTrackerNode::New(), vtkChangeTrackerLogic::New(), vtkChangeTrackerGUI::New(), vtkImageSumOverVoxels::New(), vtkImageIslandFilter::New(), vtkImageHistogramNormalization::New(), vtkImageGCR::New(), vtkMRMLAtlasCreatorNode::New(), vtkImagePCATraining::New(), vtkImagePCAFilter::New(), vtkAtlasCreatorCxxModuleLogic::New(), vtkTensorMask::New(), vtkTeemEstimateDiffusionTensor::New(), vtkSeedTracts::New(), vtkImageSetTensorComponents::New(), vtkImageGetTensorComponents::New(), vtkDiffusionTensorMathematicsSimple::New(), vtkDiffusionTensorMathematics::New(), vtkMRMLCommandLineModuleNode::New(), vtkMRMLXYPlotManagerNode::New(), vtkMRMLVolumePropertyStorageNode::New(), vtkMRMLVolumePropertyNode::New(), vtkMRMLVolumeHeaderlessStorageNode::New(), vtkMRMLVolumeArchetypeStorageNode::New(), vtkMRMLViewNode::New(), vtkMRMLVectorVolumeNode::New(), vtkMRMLVectorVolumeDisplayNode::New(), vtkMRMLUnstructuredGridStorageNode::New(), vtkMRMLUnstructuredGridNode::New(), vtkMRMLUnstructuredGridDisplayNode::New(), vtkMRMLTransformStorageNode::New(), vtkMRMLTensorVolumeNode::New(), vtkMRMLSnapshotClipNode::New(), vtkMRMLSliceNode::New(), vtkMRMLSliceCompositeNode::New(), vtkMRMLSelectionNode::New(), vtkMRMLSceneSnapshotNode::New(), vtkMRMLScene::New(), vtkMRMLScalarVolumeNode::New(), vtkMRMLScalarVolumeDisplayNode::New(), vtkMRMLROINode::New(), vtkMRMLROIListNode::New(), vtkMRMLProceduralColorNode::New(), vtkMRMLPlotNode::New(), vtkMRMLPETProceduralColorNode::New(), vtkMRMLParser::New(), vtkMRMLOrthogonalLinePlotNode::New(), vtkMRMLNRRDStorageNode::New(), vtkMRMLNonlinearTransformNode::New(), vtkMRMLNode::New(), vtkMRMLModelStorageNode::New(), vtkMRMLModelNode::New(), vtkMRMLModelHierarchyNode::New(), vtkMRMLModelDisplayNode::New(), vtkMRMLLogic::New(), vtkMRMLLinearTransformNode::New(), vtkMRMLLayoutNode::New(), vtkMRMLLabelMapVolumeDisplayNode::New(), vtkMRMLInteractionNode::New(), vtkMRMLGridTransformNode::New(), vtkMRMLGlyphableVolumeSliceDisplayNode::New(), vtkMRMLGlyphableVolumeDisplayPropertiesNode::New(), vtkMRMLGlyphableVolumeDisplayNode::New(), vtkMRMLFreeSurferProceduralColorNode::New(), vtkMRMLFreeSurferModelStorageNode::New(), vtkMRMLFreeSurferModelOverlayStorageNode::New(), vtkMRMLFiducialListStorageNode::New(), vtkMRMLFiducialListNode::New(), vtkMRMLFiducial::New(), vtkMRMLFiberBundleTubeDisplayNode::New(), vtkMRMLFiberBundleStorageNode::New(), vtkMRMLFiberBundleNode::New(), vtkMRMLFiberBundleLineDisplayNode::New(), vtkMRMLFiberBundleGlyphDisplayNode::New(), vtkMRMLDoubleArrayStorageNode::New(), vtkMRMLDoubleArrayNode::New(), vtkMRMLDiffusionWeightedVolumeNode::New(), vtkMRMLDiffusionWeightedVolumeDisplayNode::New(), vtkMRMLDiffusionTensorVolumeSliceDisplayNode::New(), vtkMRMLDiffusionTensorVolumeNode::New(), vtkMRMLDiffusionTensorVolumeDisplayNode::New(), vtkMRMLDiffusionTensorDisplayPropertiesNode::New(), vtkMRMLDiffusionImageVolumeNode::New(), vtkMRMLdGEMRICProceduralColorNode::New(), vtkMRMLCrosshairNode::New(), vtkMRMLColorTableStorageNode::New(), vtkMRMLColorTableNode::New(), vtkMRMLColorNode::New(), vtkMRMLClipModelsNode::New(), vtkMRMLCameraNode::New(), vtkMRMLBSplineTransformNode::New(), vtkMRMLArrayPlotNode::New(), vtkImageBimodalAnalysis::New(), vtkImageAccumulateDiscrete::New(), vtkEventBroker::New(), vtkFSSurfaceWFileReader::New(), vtkFSSurfaceScalarReader::New(), vtkFSSurfaceReader::New(), vtkFSSurfaceLabelReader::New(), vtkFSSurfaceAnnotationReader::New(), vtkFSLookupTable::New(), vtkSlicerCLIModuleLogic::New(), vtkPichonFastMarchingPDF::New(), vtkSlicerImageCrossHair2D::New(), vtkSlicerImageCloseUp2D::New(), vtkSlicerApplication::New(), RegisterImagesModuleLogic::New(), vtkPrincipalAxesAlign::New(), TCLAP::SwitchArg::processArg(), vtkSlicerApplicationLogic::ProcessingThreaderCallback(), qSlicerCoreApplicationPrivate::putEnv(), vtkSlicerColor::SetColor(), qVTKConnection::shortDescription(), slicer3_main(), slicerFclose(), slicerFgets(), slicerFread(), slicerFwrite(), sock_recvfrom(), socket_gethostbyaddr(), socket_gethostbyname_ex(), socket_getnameinfo(), and vtkSlicerApplication::StartApplication().

tuple autoSlicerTracto2regions::rois = glob.glob('*.roi')

tuple autoSlicerTracto2regions::rootA = os.path.abspath(os.path.dirname(sys.argv[0]))

list autoSlicerTracto2regions::tmpD = rois[s]

string autoSlicerTracto2regions::tmpF = './'

tuple autoSlicerTracto2regions::wmas = glob.glob('*.wm')