2010 Summer Project Week Multi scale Shape Based Segmentation for the Hippocampus

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Projects List

Segmentation of hippocampus and amygdala.

Segmentation of hippocampus and amygdala, Axial view

Segmentation of hippocampus and amygdala, Coronal view

Segmentation of hippocampus and amygdala, Sagittal view

Segmentation of hippocampus and amygdala, 3D surface view

Key Investigators

  • Georgia Tech: Yi Gao, Allen Tannenbaum

Objective

  • Segmentation of the hippocampus using a multi-scale shape based method.

Approach, Plan

We represent and learn the shape in a multi-scale method and then perform the segmentation of the hippocampus.

Progress

The code has been written and the method is being tested on multiple data sets.

  • The cxx code is called by python scripts to perform the learning and segmentation pipeline.
  • The method is tested, using the leave-one-out scheme, on the MR images (SPGR).


References

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