Difference between revisions of "Import/Export Farsight-GoFigure results"
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Arnaudgelas (talk | contribs) (Created page with '==Key Investigators== * Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason * RPI: Badri Roysam <div style="margin: 20px;"> <div style="width: 27%; float: left; pa…') |
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+ | __NOTOC__ | ||
+ | <gallery> | ||
+ | Image:PW-MIT2010.png|[[2010_Summer_Project_Week#Projects|Projects List]] | ||
+ | </gallery> | ||
+ | |||
==Key Investigators== | ==Key Investigators== | ||
* Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason | * Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason | ||
− | * RPI: Badri Roysam | + | * RPI: Kedar Grama, Raghav Padmanabhan, Badri Roysam |
+ | |||
+ | ==Project== | ||
<div style="margin: 20px;"> | <div style="margin: 20px;"> | ||
Line 7: | Line 14: | ||
<h3>Objective</h3> | <h3>Objective</h3> | ||
− | + | * Exchange data (cell segmentation results) between Farsight and Gofigure2 | |
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
+ | * Discuss current status of both projects | ||
+ | * Define common objects/traces used by both projects | ||
+ | * Install both projects | ||
+ | * Export the data from both projects into textfiles | ||
+ | * Import the data from Farsight into Gofigure Database | ||
+ | * Import the data from Gofigure Database into Farsight | ||
</div> | </div> | ||
Line 17: | Line 30: | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
− | + | * Export Contours/Meshes from Gofigure2 into textfile done | |
+ | * Import Contours/Meshes from textfile into Gofigure2 database done | ||
+ | * Import segmentation results from Farsight into Gofigurew done | ||
+ | * Import results from Gofigure2 into Farsight ~75% done | ||
</div> | </div> | ||
</div> | </div> | ||
+ | |||
+ | http://github.com/arnaudgelas/SegmentationToGoFigure2 | ||
+ | |||
<div style="width: 97%; float: left;"> | <div style="width: 97%; float: left;"> |
Latest revision as of 14:12, 25 June 2010
Home < Import < Export Farsight-GoFigure resultsKey Investigators
- Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason
- RPI: Kedar Grama, Raghav Padmanabhan, Badri Roysam
Project
Objective
- Exchange data (cell segmentation results) between Farsight and Gofigure2
Approach, Plan
- Discuss current status of both projects
- Define common objects/traces used by both projects
- Install both projects
- Export the data from both projects into textfiles
- Import the data from Farsight into Gofigure Database
- Import the data from Gofigure Database into Farsight
Progress
- Export Contours/Meshes from Gofigure2 into textfile done
- Import Contours/Meshes from textfile into Gofigure2 database done
- Import segmentation results from Farsight into Gofigurew done
- Import results from Gofigure2 into Farsight ~75% done
http://github.com/arnaudgelas/SegmentationToGoFigure2