October 08 2009 Meeting: VT-NAMIC Revised atlas construction workflow
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Software
- Slicer/extensions versioning
Workflow
TODO:
- link the software tools and scripts with the workflow
- prepare a branch in the sandbox with the tools not available in Slicer (confirm with Chris copyright issues)
- Prepare the data using the instructions -- LINK
- Gradient anisotropic diffusion -- PARAMETERS
- BRAINSFit initial registration -- PARAMETERS -- failure to recover the pose for Hugo and Valentino
- Manual pose alignment for Hugo and Valentino