NAMIC Wiki - User contributions [en]

NeedlePlace

2015-01-09T17:15:35Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
File:Robot_MR.jpg| MR Robot
File:Example2.jpg|Z Frame Registration
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

NeedlePlace

2015-01-09T17:14:05Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
File:Example2.jpg|Z Frame Registration
File:Robot_MR.jpg| MR Robot
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

NeedlePlace

2015-01-09T17:13:29Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
File:Example2.jpg
File:Robot_MR.jpg
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

NeedlePlace

2015-01-09T17:11:55Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png File:Example2.jpg File:Robot_MR.jpg|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

NeedlePlace

2015-01-09T17:11:11Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png Example2.jpg Robot_MR.jpg|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

NeedlePlace

2015-01-09T17:10:15Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]|[[File:Example2.jpg]]|[[File:Robot_MR.jpg]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

NeedlePlace

2015-01-09T17:05:03Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
[[File:Example2.jpg]]
[[File:Robot_MR.jpg]]
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode
* Try to improve the user interface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
* Customize Line Marker Registration source to detect new configuration of fiducials
* Discussed how to change the workflow for clinical use
</div>
</div>

File:Robot MR.jpg

2015-01-09T17:00:04Z

Bamshad:

NeedlePlace

2015-01-09T16:59:27Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
[[File:Example2.jpg]]
[[File:Robot_MR.jpg]]
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode to
* Try to improve the user ineerface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>

*
</div>
</div>

NeedlePlace

2015-01-09T16:59:01Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
[[File:Example2.jpg]]
[[File:Robot.jpg]]
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode to
* Try to improve the user ineerface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>

*
</div>
</div>

NeedlePlace

2015-01-09T16:56:55Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
[[File:Example2.jpg]]
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode to
* Try to improve the user ineerface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>

*
</div>
</div>

File:Example2.jpg

2015-01-09T16:55:38Z

Bamshad:

NeedlePlace

2015-01-09T16:55:11Z

Bamshad: /* Project Description */

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode to
* Try to improve the user ineerface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
[[File:Example2.jpg]]
*
</div>
</div>

NeedlePlace

2015-01-09T16:54:00Z

Bamshad: /* Project Description */

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode to
* Try to improve the user ineerface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
[[File:Example.jpg]]
*
</div>
</div>

NeedlePlace

2014-12-27T02:34:25Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Detect embedded fiducial markers on the robot by using Line Marker Registration sourcecode to
* Try to improve the user ineerface by reducing the complexity of 3D Slicer GUI for end users
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
*
</div>
</div>

NeedlePlace

2014-12-24T22:22:52Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
Bamshad Azizi,
Li Ming,
Li Ye,
Kevin Cleary

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*Improve registration part
**using Line Marker Registration
*Improve user interface
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
* Use Line Marker Registration sourcecode to detect embedded fiducial markers on the robot
* Try to improve the user ineterface by reducing the complexity of 3D Slicer for medical staff
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
*
</div>
</div>

NeedlePlace

2014-12-24T22:09:56Z

Bamshad: Created page with '__NOTOC__ <gallery> Image:PW-2015SLC.png|Projects List </gallery> ==Key Investigators== ==Project Description== <div style="margin: 20px;…'

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
*
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
*
</div>
</div>

2015 Project Week: Template

2014-12-24T22:09:51Z

Bamshad:

2015 Winter Project Week

2014-12-24T22:09:19Z

Bamshad: /* Image-Guided Therapy */

__NOTOC__

[[image:PW-2015SLC.png|300px]]

Welcome to the 20th Project week page!

== Introduction ==
Founded in 2005, the National Alliance for Medical Image Computing (NAMIC), was chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], built using [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual event which draws 80-120 researchers. As of August 2014, it is a MICCAI endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO]. The next events in this ongoing series will occur in [http://wiki.na-mic.org/Wiki/index.php/2015_Winter_Project_Week Salt Lake City, Utah in January of 2015], followed by one in Boston, MA in June of 2015.

A summary of all previous Project Events is available [[Project_Events#Past|here]].

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]

== '''Logistics''' ==
*'''Dates:''' January 5-9, 2015.
*'''Location:''' Salt Lake City, Utah
*'''REGISTRATION:''' Please click [http://umarket.utah.edu/ecom/checkout.tpl?App_Type=0046&Item_Num=WPW2015 '''here'''] to register online before December 24, 2014. All participants must pay a registration fee 550 USD, which covers our catering and facilities costs.
*'''Venue:''' The venue for the meeting is the Marriott City Center, Salt Lake City, Utah. You can book online, by clicking [http://www.marriott.com/meeting-event-hotels/group-corporate-travel/groupCorp.mi?resLinkData=2015%20Winter%20Project%20Week^slccc%60namnama%60149%60USD%60false%601/4/15%601/10/15%6012/05/14&app=resvlink&stop_mobi=yes here.] The room rate for the meeting is 149 USD per night.

== Agenda==
{| border="1" cellpadding="5"
|- style="background:#eeeeee; font-size:125%; color:#0063B6" align="center"
| style="width:5%"| '''Time'''
| style="width:19%" | '''Monday, January 5'''
| style="width:19%" | '''Tuesday, January 6'''
| style="width:19%" | '''Wednesday, January 7'''
| style="width:19%" | '''Thursday, January 8'''
| style="width:19%" | '''Friday, January 9'''
|-
| style="background:#eeeeee; color:black"|
| style="background:#dbf3ff; color:#522200"| '''[[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#dbf3ff; color:#522200"| '''[[2015_Winter_Project_Week|Project Activities]] '''<br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#dbf3ff; color:#522200"| '''[[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#dbf3ff; color:#522200"| '''[[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#dbf3ff; color:#522200"| '''[[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
|-
| style="background:#eeeeee; color:black"|'''7:30-8:00'''
| style="background:#ffffff; color:black"|
| style="background:#dbf3ff; color:black"| Breakfast <br><font color="#BB9933">''(Olympus A)''</font>
| style="background:#dbf3ff; color:black"| Breakfast <br><font color="#BB9933">''(Olympus A)''</font>
| style="background:#dbf3ff; color:black"| Breakfast <br><font color="#BB9933">''(Olympus A)''</font>
| style="background:#dbf3ff; color:black"| Breakfast <br><font color="#BB9933">''(Olympus A)''</font>
|-
| style="background:#eeeeee; color:black"|'''8:00-10:00'''
| <br><font color="#9966cc"></font>
|9-10am: [[2015 Winter Project Week COPD Breakout|Breakout Session:COPD]] (Raul San Jose) <br><font color="#44AA88">''(Amethyst 1)''</font> <br>
|9-10am: [[2015 Winter Project Week QIICR and DICOM Breakout|Breakout Session:QIICR and DICOM]] (Andrey Fedorov, Steve Pieper) <br><font color="#44AA88">''(Amethyst 1)''</font> <br>
| '''[[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#dbf3ff; color:#522200"|[[2015_Winter_Project_Week|9am: Project Presentations]]<br><font color="#44AA88">''(Olympus B)''</font>
|-
| style="background:#eeeeee; color:black"|'''10:00-10:30'''
| style="background:#ffffff; color:black"|
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
|-
| style="background:#eeeeee; color:black"|'''10:30-12:00'''
|
|
|
| [[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
|
|-
| style="background:#eeeeee; color:black"|'''12:00-1:00'''
| style="background:#dbf3ff; color:black"| Lunch <br><font color="#BB9933">''(Olympus A)''</font>
| style="background:#dbf3ff; color:black"| Lunch <br><font color="#BB9933">''(Olympus A)''</font> <br>
| style="background:#dbf3ff; color:black"| Lunch <br><font color="#BB9933">''(Olympus A)''</font><br>
| style="background:#dbf3ff; color:black"| Lunch <br><font color="#BB9933">''(Olympus A)''</font>
| style="background:#dbf3ff; color:black"| Boxed Lunch and Adjourn <br><font color="#BB9933">''(Olympus A)''</font>
|-
| style="background:#eeeeee; color:black"|'''1:00-3:00'''l
| style="background:#dbf3ff; color:#522200"|[[2015_Winter_Project_Week|Project Presentations]]<br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#dbf3ff; color:#522200"|[[2015_SLC_Training_Workshop|Slicer Workshop (Ron Kikinis)]]
| <font color="#44AA88">''(Olympus B)''</font>
|
|
|-
| style="background:#eeeeee; color:black"|'''3:00-3:30'''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#dbf3ff; color:black"| Coffee <br>''(General area)''
| style="background:#ffffff; color:black"|
|-
| style="background:#eeeeee; color:black"|'''3:00-5:00'''
|
|3:15-4pm: [[2015_Winter_Project_Week_Segmentations_Breakout|Breakout Session: Segmentations]] <br><font color="#44AA88">''(Amethyst 2)'' <br> 
| style="background:#ffffff; color:black"|
|[[2015_Winter_Project_Week|Project Activities]] ''' <br><font color="#44AA88">''(Olympus B)''</font>
| style="background:#ffffff; color:black"|
|-
| style="background:#eeeeee; color:black"|'''05:00-07:00'''
| style="background:#dbf3ff; color:black"|
| style="background:#dbf3ff; color:black"|
| style="background:#dbf3ff; color:black"|
| style="background:#dbf3ff; color:black"|'''6:00''' Optional: [http://www.murphysbarandgrillut.com/ Beer at Murphy's] (like last year)
| style="background:#ffffff; color:black"|
|}

=Projects=
* [[2015_Project_Week_Template | Template for project pages]]

==Image-Guided Therapy==
* [[NeedleFinder | Image-based Needle Detection from MRI]] (Andre Mastmeyer, Guillaume Pernelle, Tina Kapur, Steve Pieper, Ron Kikinis)
*Tracked ultrasound benchtop experment system for neurosurgery (Steve Pieper, Jim Miller)
*Case review for interactive registration (Steve Pieper, Jim Miller, Alireza Mehrtash)
*[[NeedlePlace | Workflow for percutaneous needle place]] (Bamshad Azizi, Li Ming, Li Ye, Kevin Cleary)
*Registration of pre-op and intra-op DTI to correlate paramets with post-op prognosis(Li Ye, Steve Pieper, Alireza Mehrtash, Lauren O'Donnell)
* [[ProstateSegmentation | Prostate segmentation and biopsy]] (Peter Behringer, Andriy Fedorov)
* [[Needle Detection Tutorial | Needle Detection Tutorial]] (Gao Yang, Andre Mastmeyer, Guillaume Pernelle, Tina Kapur)

==Huntington's Disease==

==TBI==

==Stroke==

==Cardiac==

== Lung ==

*Small lung nodule differential diagnosis using 3D Slicer (Li Ming, Jay Jagadeesan, Jim Miller)

==Head and Neck Cancer / Radiotherapy ==

==[http://qiicr.org QIICR]==
* Mechanism to pull related DICOM series on derived modality load (Andrey, Csaba)
* Segmentation object and enhanced multiframe object IO in DCMTK and Slicer (Steve, Andrey, Michael)
* [[T1 mapping for variable flip angle | T1 mapping for variable flip angle]] (Artem, Xiao, Andrey)
* Representation of Iowa QIN data using DICOM (Andrey, Christian Bauer)

==Feature Extraction==

==Additional Brain Image Analysis==

==Slicer4 Extensions==
* PET Tumor Segmentation (Christian Bauer)

==TMJOA RO1 - Collaboration with NAMIC==
* Improved model display (Francois Boudin, Steve Pieper)

==Infrastructure==

* Micro and Macro Scale in Slicer (Nicole Aucoin, Bradley Lowekamp)
* Rulers in Markups module (Nicole Aucoin)
* [[2015_Winter_Project_Week:Segmentations|Segmentations]] (Csaba Pinter, ?)
* [[2015_Winter_Project_Week:DICOM_References|DICOM references]] (Andrey Fedorov, Csaba Pinter, Steve Pieper)
* [[2015_Winter_Project_Week:OpenAtlas|Open Atlas]] (Bill Lorensen)

== '''Registrants''' ==

Do not add your name to this list - it is maintained by the organizers based on your paid registration.

# Nicole Aucoin ; Brigham and Women's Hospital
# Bamshad Azizi Koutenaei ; Children's National Health System
# Christian Bauer ; University of Iowa
# Peter Behringer ; Brigham and Women's Hospital
# Francois Budin ; UNC
# Byunghyun Cho; Koh Young Technology Inc.
# Xiao Da ; Athinoula A. Martinos Center for Biomedical Imaging
# Andriy Fedorov ; Brigham and Women's Hospital
# JC Fillion-Robin; Kitware, Inc.
# James Fishbaugh; University of Utah
# Yang Gao ; Brigham and Women's Hospital
# German Gonzalez ; Brigham and Women's Hospital
# Rola Harmouche ; Brigham and Women's Hospital
# Hans Johnson ; University of Iowa
# Tina Kapur ; Brigham and Women's Hospital
# Ron Kikinis ; Brigham and Women's Hospital
# Eun Young Regina Kim ; University of Iowa
# Sangyong Kim, Kohyoung Techonology
# Franklin King, Queen's University and Brigham and Women's Hospital
# Ming Li ; Brigham and Women's Hospital
# Ye Li ; Brigham and Women's Hospital
# Ruizhi Liao; Brigham and Women's Hospital
# Julia Lopinto ; The University of Michigan
# Bill Lorensen; Noware
# Bradley Lowenkamp; Medical Science Computing
# Lucie Macron ; The University of Michigan
# Artem Mamonov ; MGH Martinos
# Andre Mastmeyer ; University of Keil and Brigham and Women's Hospital
# Alireza Mehrtash ; Brigham and Women's Hospital
# James Miller ; GE Global Research
# Lauren O'Donnell; Brigham and Women's Hospital and Harvard Medical School
# Jorge Onieva ; Brigham and Women's Hospital
# Guillaume Pernelle; Imperial College London
# Steve Pieper ; Isomics Inc.
# Csaba Pinter ; Queens University
# Adam Rankin ; Robarts Research Institute
# James Ross ; Brigham and Women's Hospital
# Raul San Jose ; Brigham and Women's Hospital
# Anuja Sharma; University of Utah
# Matthew Toews; Brigham and Women's Hospital
# Junichi Tokuda ; Brigham and Women's Hospital
# Bo Wang ; SCI Institute University of Utah
# William Wells; Brigham and Women's Hospital
# Alexander Yarmarkovich; Brigham and Women's Hospital

2015 Project Week: Template

2014-12-24T22:00:02Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week2#Projects|Projects List]]
</gallery>

==Key Investigators==
test

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
*
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
*
</div>
</div>

2015 Project Week: Template

2014-12-24T21:59:37Z

Bamshad:

__NOTOC__
<gallery>
Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
test

==Project Description==
<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Objective</h3>
*
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Approach, Plan</h3>
*
</div>
<div style="width: 27%; float: left; padding-right: 3%;">
<h3>Progress</h3>
*
</div>
</div>

User:Bamshad

2014-12-24T21:53:12Z

Bamshad: Created page with 'for test'

for test