NAMIC Wiki - User contributions [en]

PW27 Hangouts Notes

2017-12-12T15:08:24Z

Bpaniagua:

Back to [[Project_Week_27]]

These are the notes from PW#27 Preparation Hangouts

==Hangout #6: Dec 12 ==

* Discussion about Nicole's project

==Hangout #5: Dec 5 ==

* Discussion and work session on github for project week organization
** General goal is to replace the wiki with something more "standard"
** Published site: https://na-mic.github.io/ProjectWeek/
** Repository: https://github.com/NA-MIC/ProjectWeek
** Overall github is not really easier than mediawiki but generally it's agreed that git has become an essential tool that all Project Week attendees will benefit from learning.
* Usage
** Everyone needs to create a github account
** First edit should be done by forking the ProjectWeek repository and creating a pull request
** Several people (Andras, Steve, Jc, Tina...) are administrators who will
*** Merge the pull request
*** Add the attendee to the collaborator list for the Project Week project so that future edits can be done directly without using pull rqeusts
** Discussions about project week should happen on discourse.slicer.org, not on github

==Hangout #4: Nov 28 ==

* Discussion "Slicer solutions"
** Nice because it supports different dissemination mechanism. See [https://discourse.slicer.org/t/its-all-about-transitions-lets-talk-about-slicers-landing-page/113/35?u=jcfr discourse discussion]
** Need to have a community, a gate keeper
** Criteria (copied from discourse):
*** Provides service to an specific community (clinical/methodological)
*** Provides a processing pipeline from beginning to end
*** Has a support system: a dedicated PI/coordinator, a website, documentation/tutorials etc
** Topic to discuss at project week:
*** Where to advertise "commercial" solutions ? It should be clear that is closed source
*** When/how to update list of solutions ?
*** Share story about building FDA approved app based on Slicer
*** Services to support Slicer custom
*** Streamline continuous integration
*** Improve landing page

==Hangout #3: Nov 21 ==
*Main topic: Gran Canaria Team projects
* Administrivia: should we use this to help people copy the template page to make their own project page? https://www.mediawiki.org/wiki/Extension:Duplicator
*Discourse sub community?
**Subscribe, see the welcome page below. google, github, Facebook are all supported authentication options so people can one-click use their existing accounts if they want:
**https://discourse.slicer.org/t/welcome-to-the-3d-slicer-forum/8
**After logging in, visit: https://discourse.slicer.org/c/community/project-week, and click the “Watching” button to enable notifications:
*Administrivia -- assign topics for remainder of the calls
**Nov 28 — SlicerSolutions (owners of 6 solutions are Bea, Andras, Steve, Lauren, Raul, Tamas)
**Dec 5
**Dec 12
**Dec 19
**Jan 2 -- do we need one

=Hangout #2: November 14th, 2017=

*10.00 AM Boston time
* Topics:
** New topics to be added to the project list
** Analytics of traffic in Slicer.org and Discourse
** Registration page to be done
** Andras agreed to provide segmentation help
*** Tina wants to organize it
*** Participants will be asked to provide sharable test data and to post results / tutorial on discourse site

=Hangout #1: November 7th, 2017=

*10.00 AM Boston time
* discussed overall theme of Project Week. After reviewing options VR/AR emerged as a common interest
** recent experimental SlicerOpenVR could be demoed
** other devices could be set up for experimentation
* Discussed opportunity for people to bring their own data to get suggestions for segmentations

Project Week 27

2017-11-21T16:12:45Z

Bpaniagua: /* Projects */

{{Clear}}{{TOC right}}
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW27.png|300px]]
 

=Welcome to the web page for the 27th Project Week!=
The 27th NA-MIC Project Week will be held during the week of January 8-12, 2018 at MIT.

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

==Logistics==

*'''Dates:''' January 8-12, 2018.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: R&D)
*'''Transportation:''' Please plan to use public transportation. No parking permits are available by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]

*'''REGISTRATION:''' Coming soon
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), chartered with building a computational infrastructure to support biomedical research, was seeded in 2005 and funded through 2015 by the [http://www.ncbcs.org/ NIH NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

=== Notes ===

Conference call notes are available [[PW27_Hangouts_Notes|here]].

=== Planning Call Calendar ===

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=Conference Calls for Preparation
|view=WEEK
}}

=== Project Week Joining Info ===
To join the preparation hangout, click on the event above, then "more details" and finally click on the video link under "Joining Info".

[[File:2018-winter-projectweek-calendar-joining.png]]

==Calendar==



{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20180108/20180112
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

== How to add a new project ? ==

# Join the weekly [[#Conference_Calls_for_Preparation|preparation call]] to discuss your idea
# Add a new entry in the category below by copying the [[2018_Project_Week_Template | Project Template]]

== Visualization and Interaction ==
#[[Project_Week_27/SlicerVR | SlicerVR Updates]] (JC Fillon-Robin, Beatriz Paniagua, and others)

== Deep Learning. Radiomics and GPUs ==

== Web Technologies ==

== IGT: Navigation, Robotics, Surgical Planning ==

==dMRI==

==Quantitative Imaging Informatics==

== Shape Analysis, Segmentation ==
#[[Project_Week_27/SlicerSALT | SlicerSALT Shape Analysis Toolbox Updates]] (Laura Pascal, JC Fillon-Robin, Beatriz Paniagua, Juan Prieto, Loic Michaud)
#[[Project_Week_27/SegmentationInverseChallenge | Segmentation Inverse Challenge Playoff]] (Tina Kapur, Csaba Pinter, Steve Pieper, Andras Lasso)
#[[Project_Week_27/ShapeVariationAnalyzer | Shape Variation analyzer]] (Juan Prieto, Nina Tubau)
#[[Project_Week_27/SelfLearningApplications | Shape self-learning applications]] (Juan Prieto, Loic Michaud)

== Infrastructure ==
#[[Project_Week_27/Slicer Custom Application | Slicer Custom Application]] (Jc Fillon-Robin, Andras Lasso)
#[[Project_Week_27/Slicer Documentation | Slicer Documentation @ ReadTheDocs]] (Jc Fillon-Robin, Andras Lasso)

==Training and Dissemination==

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration.

Project Week 27

2017-11-21T16:02:26Z

Bpaniagua: /* Shape Analysis, Segmentation */

{{Clear}}{{TOC right}}
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW27.png|300px]]
 

=Welcome to the web page for the 27th Project Week!=
The 27th NA-MIC Project Week will be held during the week of January 8-12, 2018 at MIT.

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

==Logistics==

*'''Dates:''' January 8-12, 2018.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: R&D)
*'''Transportation:''' Please plan to use public transportation. No parking permits are available by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]

*'''REGISTRATION:''' Coming soon
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), chartered with building a computational infrastructure to support biomedical research, was seeded in 2005 and funded through 2015 by the [http://www.ncbcs.org/ NIH NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

=== Notes ===

Conference call notes are available [[PW27_Hangouts_Notes|here]].

=== Planning Call Calendar ===

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=Conference Calls for Preparation
|view=WEEK
}}

=== Project Week Joining Info ===
To join the preparation hangout, click on the event above, then "more details" and finally click on the video link under "Joining Info".

[[File:2018-winter-projectweek-calendar-joining.png]]

==Calendar==



{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20180108/20180112
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

== How to add a new project ? ==

# Join the weekly [[#Conference_Calls_for_Preparation|preparation call]] to discuss your idea
# Add a new entry in the category below by copying the [[2018_Project_Week_Template | Project Template]]

== Visualization and Interaction ==

== Deep Learning. Radiomics and GPUs ==

== Web Technologies ==

== IGT: Navigation, Robotics, Surgical Planning ==

==dMRI==

==Quantitative Imaging Informatics==

== Shape Analysis, Segmentation ==
#[[Project_Week_27/SlicerSALT | SlicerSALT Shape Analysis Toolbox Updates]] (Laura Pascal, JC Fillon-Robin, Beatriz Paniagua, Juan Prieto, Loic Michaud)
#[[Project_Week_27/SegmentationInverseChallenge | Segmentation Inverse Challenge Playoff]] (Tina Kapur, Csaba Pinter, Steve Pieper, Andras Lasso)
#[[Project_Week_27/ShapeVariationAnalyzer | Shape Variation analyzer]] (Juan Prieto, Nina Tubau)
#[[Project_Week_27/SelfLearningApplications | Shape self-learning applications]] (Juan Prieto, Loic Michaud)

== Infrastructure ==
#[[Project_Week_27/Slicer Custom Application | Slicer Custom Application]] (Jc Fillon-Robin, Andras Lasso)
#[[Project_Week_27/Slicer Documentation | Slicer Documentation @ ReadTheDocs]] (Jc Fillon-Robin, Andras Lasso)

==Training and Dissemination==

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration.

Project Week 27

2017-11-21T15:58:58Z

Bpaniagua: /* Shape Analysis, Segmentation */

{{Clear}}{{TOC right}}
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW27.png|300px]]
 

=Welcome to the web page for the 27th Project Week!=
The 27th NA-MIC Project Week will be held during the week of January 8-12, 2018 at MIT.

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

==Logistics==

*'''Dates:''' January 8-12, 2018.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: R&D)
*'''Transportation:''' Please plan to use public transportation. No parking permits are available by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]

*'''REGISTRATION:''' Coming soon
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), chartered with building a computational infrastructure to support biomedical research, was seeded in 2005 and funded through 2015 by the [http://www.ncbcs.org/ NIH NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

=== Notes ===

Conference call notes are available [[PW27_Hangouts_Notes|here]].

=== Planning Call Calendar ===

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=Conference Calls for Preparation
|view=WEEK
}}

=== Project Week Joining Info ===
To join the preparation hangout, click on the event above, then "more details" and finally click on the video link under "Joining Info".

[[File:2018-winter-projectweek-calendar-joining.png]]

==Calendar==



{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20180108/20180112
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

== How to add a new project ? ==

# Join the weekly [[#Conference_Calls_for_Preparation|preparation call]] to discuss your idea
# Add a new entry in the category below by copying the [[2018_Project_Week_Template | Project Template]]

== Visualization and Interaction ==

== Deep Learning. Radiomics and GPUs ==

== Web Technologies ==

== IGT: Navigation, Robotics, Surgical Planning ==

==dMRI==

==Quantitative Imaging Informatics==

== Shape Analysis, Segmentation ==
#[[Project_Week_27/SlicerSALT | SlicerSALT Shape Analysis Toolbox Updates]] (Laura Pascal, JC Fillon-Robin, Beatriz Paniagua, Juan Prieto, Loic Michaud)
#[[Project_Week_27/SegmentationInverseChallenge | Segmentation Inverse Challenge Playoff]] (Tina Kapur, Csaba Pinter, Steve Pieper, Andras Lasso)

== Infrastructure ==
#[[Project_Week_27/Slicer Custom Application | Slicer Custom Application]] (Jc Fillon-Robin, Andras Lasso)
#[[Project_Week_27/Slicer Documentation | Slicer Documentation @ ReadTheDocs]] (Jc Fillon-Robin, Andras Lasso)

==Training and Dissemination==

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration.

Project Week 27

2017-11-21T15:36:32Z

Bpaniagua: /* Shape Analysis, Segmentation */

{{Clear}}{{TOC right}}
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW27.png|300px]]
 

=Welcome to the web page for the 27th Project Week!=
The 27th NA-MIC Project Week will be held during the week of January 8-12, 2018 at MIT.

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

==Logistics==

*'''Dates:''' January 8-12, 2018.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: R&D)
*'''Transportation:''' Please plan to use public transportation. No parking permits are available by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]

*'''REGISTRATION:''' Coming soon
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), chartered with building a computational infrastructure to support biomedical research, was seeded in 2005 and funded through 2015 by the [http://www.ncbcs.org/ NIH NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

=== Notes ===

Conference call notes are available [[PW27_Hangouts_Notes|here]].

=== Planning Call Calendar ===

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=Conference Calls for Preparation
|view=WEEK
}}

=== Project Week Joining Info ===
To join the preparation hangout, click on the event above, then "more details" and finally click on the video link under "Joining Info".

[[File:2018-winter-projectweek-calendar-joining.png]]

==Calendar==



{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20180108/20180112
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

== How to add a new project ? ==

# Join the weekly [[#Conference_Calls_for_Preparation|preparation call]] to discuss your idea
# Add a new entry in the category below by copying the [[2018_Project_Week_Template | Project Template]]

== Visualization and Interaction ==

== Deep Learning. Radiomics and GPUs ==

== Web Technologies ==

== IGT: Navigation, Robotics, Surgical Planning ==

==dMRI==

==Quantitative Imaging Informatics==

== Shape Analysis, Segmentation ==
#[[Project_Week_27/SlicerSALT | SlicerSALT Shape Analysis Toolbox Updates]] (Laura Pascal, JC Fillon-Robin, Beatriz Paniagua)
#[[Project_Week_27/SegmentationInverseChallenge | Segmentation Inverse Challenge Playoff]] (Tina Kapur, Csaba Pinter, Steve Pieper, Andras Lasso)

== Infrastructure ==
#[[Project_Week_27/Slicer Custom Application | Slicer Custom Application]] (Jc Fillon-Robin, Andras Lasso)
#[[Project_Week_27/Slicer Documentation | Slicer Documentation @ ReadTheDocs]] (Jc Fillon-Robin, Andras Lasso)

==Training and Dissemination==

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration.

PW27 Hangouts Notes

2017-11-14T15:41:00Z

Bpaniagua: /* Hangout #2: November 14th, 2017 */

Back to [[Project_Week_27]]

These are the notes from PW#27 Preparation Hangouts

=Hangout #1: November 7th, 2017=

*10.00 AM Boston time
* discussed overall theme of Project Week. After reviewing options VR/AR emerged as a common interest
** recent experimental SlicerOpenVR could be demoed
** other devices could be set up for experimentation

=Hangout #2: November 14th, 2017=

*10.00 AM Boston time
* Topics:
** New topics to be added to the project list
** Analytics of traffic in Slicer.org and Discourse
** Registration page to be done

PW27 Hangouts Notes

2017-11-14T15:31:37Z

Bpaniagua: /* Hangout #2: November 14th, 2017 */

Project Week 27

2017-11-14T15:15:19Z

Bpaniagua: /* Shape Analysis, Segmentation */

{{Clear|right}}{{TOC right}}
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW27.png|300px]]
 

=Welcome to the web page for the 27th Project Week!=
The 27th NA-MIC Project Week will be held during the week of January 8-12, 2018 at MIT.

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

==Logistics==

*'''Dates:''' January 9-13, 2017.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: R&D)
*'''Transportation:''' Public transportation is highly encouraged, as no parking permits will be issued by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]
*'''REGISTRATION:''' Register [https://www.regonline.com/2017projectweek here]. Registration Fee: $330.
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), was founded in 2005 and chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

=== Notes ===

Conference call notes are available [[PW27_Hangouts_Notes|here]].

=== Planning Call Calendar ===

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=Conference Calls for Preparation
|view=WEEK
}}

=== Project Week Joining Info ===
To join the preparation hangout, click on the event above, then "more details" and finally click on the video link under "Joining Info".

[[File:2018-winter-projectweek-calendar-joining.png]]

==Calendar==



{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20180108/20180112
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

*Use this [[2018_Project_Week_Template | Updated Template for project pages]]

== Visualization and Interaction ==

== Deep Learning and GPUs ==

== Web Technologies ==

== IGT: Navigation, Robotics, Surgical Planning ==

==dMRI==

==Quantitative Imaging Informatics==

== Shape Analysis, Segmentation ==
#[[Project_Week_27/SlicerSALT | SlicerSALT Shape Analysis Toolbox Updates]] (Laura Pascal, JC Fillon-Robin, Beatriz Paniagua)

== Infrastructure ==

==Training and Dissemination==

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [https://www.regonline.com/2018projectweek registration site].

Project Week 27

2017-11-14T15:13:09Z

Bpaniagua: /* Shape Analysis, Segmentation */

{{Clear|right}}{{TOC right}}
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW27.png|300px]]
 

=Welcome to the web page for the 27th Project Week!=
The 27th NA-MIC Project Week will be held during the week of January 8-12, 2018 at MIT.

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

==Logistics==

*'''Dates:''' January 9-13, 2017.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: R&D)
*'''Transportation:''' Public transportation is highly encouraged, as no parking permits will be issued by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]
*'''REGISTRATION:''' Register [https://www.regonline.com/2017projectweek here]. Registration Fee: $330.
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), was founded in 2005 and chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

=== Notes ===

Conference call notes are available [[PW27_Hangouts_Notes|here]].

=== Planning Call Calendar ===

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=Conference Calls for Preparation
|view=WEEK
}}

=== Project Week Joining Info ===
To join the preparation hangout, click on the event above, then "more details" and finally click on the video link under "Joining Info".

[[File:2018-winter-projectweek-calendar-joining.png]]

==Calendar==



{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20180108/20180112
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

*Use this [[2018_Project_Week_Template | Updated Template for project pages]]

== Visualization and Interaction ==

== Deep Learning and GPUs ==

== Web Technologies ==

== IGT: Navigation, Robotics, Surgical Planning ==

==dMRI==

==Quantitative Imaging Informatics==

== Shape Analysis, Segmentation ==
#[[Project_Week_27/SlicerSALT | SlicerSALT Shape Analysis Toolbox ]] (Laura Pascal, JC Fillon-Robin, Beatriz Paniagua)

== Infrastructure ==

==Training and Dissemination==

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [https://www.regonline.com/2018projectweek registration site].

PW27 Hangouts Notes

2017-11-14T14:43:39Z

Bpaniagua: Created page with "Back to Project_Week_27#Notes These are the notes from PW#27 Preparation Hangouts =Hangout #1: November 7th, 2017= *10.00 AM Boston time * [Add topics here] =Hangout..."

Back to [[Project_Week_27#Notes]]

These are the notes from PW#27 Preparation Hangouts

=Hangout #1: November 7th, 2017=

*10.00 AM Boston time
* [Add topics here]

=Hangout #2: November 14th, 2017=

*10.00 AM Boston time
* [Add topics here]

2017 Non Profit Summer Camp

2017-06-12T20:24:08Z

Bpaniagua: /* Healthy Girls Save the World Camp */

__NOTOC__
<gallery>
</gallery>

==Healthy Girls Save the World Camp==

Bea will be attending as presenter [http://healthygirlssavetheworld.org/ Healthy Girls Save the World Camp]. This camp helps exposing low-socioeconomic, minority middle school girls in the NC Triangle area to healthful practices. This years theme is Women in STEM in NC, so the plan is to introduce girls to models of women in STEM in order to introduce the girls to future career options. Bea will be leading a short intro to Slicer, open software, and python coding workshop.

==Agenda==

2017 Non Profit Summer Camp

2017-06-12T20:23:38Z

Bpaniagua: Created page with "__NOTOC__ <gallery> </gallery> ==Healthy Girls Save the World Camp== Bea will be attending as presenter [http://healthygirlssavetheworld.org/ Healthy Girls Save the World Ca..."

__NOTOC__
<gallery>
</gallery>

==Healthy Girls Save the World Camp==

Bea will be attending as presenter [http://healthygirlssavetheworld.org/ Healthy Girls Save the World Camp]. This camp helps exposing low-socioeconomic, minority middle school girls in the NC Triangle area to healthful practices. This years theme is Women in STEM in NC, so they plan is to introduce girls models of women in STEM to introduce the girls to future career options. Bea will be leading a short intro to Slicer, open software, and python coding workshop.

==Agenda==

Events

2017-06-12T20:15:16Z

Bpaniagua: /* 2017 */

__NOTOC__
== Introduction ==
NA-MIC organizes a variety of events:
* Workshops address specific research focus areas.
* Training events aim at training NA-MIC participants and outsiders in NA-MIC technologies.
* Project weeks are intended for making progress in a variety of projects.

The majority of NA-MIC events are hands-on and open to collaborators and interested scientists.

== [[TCON:Main|Telephone Conferences]] ==
== Upcoming Events ==
===2017===

*'''June 13:''' [[2017_Non_Profit_Summer_Camp|Healthy Girls Save the World Camp]], UNC-Chapel Hill, North Carolina
*'''June 26-30:''' [[2017_Summer_Project_Week|25th Project Week]], Catanzaro Lido, Calabria, Italy
*'''July 17-21:''' [http://wiki.imaging.robarts.ca/ 26th Project Week], Robarts Research Institute, London, ON, Canada

== Standing Events ==
* [[TCON:Main|A list of all upcoming and past teleconferences]]
* [[Engineering:Programming_Events|Hands on Project Events]]
* [http://www.slicer.org/slicerWiki/index.php/Slicer:Developer_Meetings Slicer developer meetings]
* [[Event:Journal Club at BWH|Journal Club at BWH]]

== Past Events ==
===2017===
*June 6: [[June_2017_BWH_Radiology_Resident_Education| BWH Radiology Resident Research Seminar]], Boston, MA
----
*March 25: [[2017_IADR_Workshop|DCBIA Craniofacial Workshop]], 95th General Session & Exhibition of the IADR, San Francisco
*March 14-15: [http://ncigt.org/igt9 9th NCIGT and NIH Image Guided Therapy Workshop], Bethesda, MD
*March 11-12: [[Hiroshima_2017|Seminar for Young Researchers]], Hiroshima, Japan
----
*February 1: [[2017_Universite_Catholique_Lille| 3D Slicer presentation]], Université Catholique de Lille, France
----
*January 12: [[2017_Tutorial_Contest| 2017 Tutorial Contest]], MIT
*January 10: [[BWH_Radiology_Residents_Workshop|BWH Radiology Residents Workshop]], Boston, MA
*January 9-13: [[2017_Winter_Project_Week|Winter Project Week]], MIT

===2016===
*November 27-December 2: [[RSNA_2016| 102nd Annual Meeting of the Radiological Society of North America, RSNA 2016]], Chicago, IL
*November 17: [[2016_BWH_Radiology_Resident_Education | Radiology Residents 3D Slicer Hands-on workshop]], Boston, MA
----
*October 21: [http://interactivemedical.org/imic2016/ Interactive Medical Image Computing (IMIC) Workshop], Athens, Greece
*October 17-21: [http://miccai.org/ MICCAI 2016], Athens, Greece
*October 7-8: [[media:11thIMRI-Brochure-final.pdf | 11th Interventional MRI Symposium]], Baltimore, MD
**[http://www.hopkinscme.edu/CourseDetail.aspx/80038447 Registration]
**[https://easychair.org/conferences/?conf=imri2016 Abstract Submission]
----
*September 15: [[2016_BWH_Resident_Education | 3D Slicer seminar for BWH Radiology Residents]], Brigham and Women's Hospital, Boston, MA
----
*August 31: [[2016_Beth_Israel_Training_Workshop | 3D Slicer Hands-on Training Workshop]], Beth Israel Deaconess Medical Center, Boston, MA
----
*June 20-25: [[2016_Summer_Project_Week| '''Summer Project Week''']], Heidelberg, Germany
*June 8: [[2016_Beth_Israel_Psychiatry_Seminar | 3D Slicer Seminar, Beth Israel Deaconess Medical Center]], Boston, MA
----
* May 23-27: [https://docs.google.com/document/d/1BIQHLheqYhsfeHhCTVtid5bZMVywlo1UmeK6-ZmHeq8/edit Medical Image Webapp Software Hackfest], Boston, MA
----
*April 27: Andrey Fedorov invited presentation at the [https://cancer.stonybrookmedicine.edu/2016_ResearchSymposium 2016 Gloria and Mark Snyder Symposium for Cancer Medicine], Stony Brook, NY ([https://dx.doi.org/10.6084/m9.figshare.3205939.v1 | slides])
*April 15: [[Mount_Sinai_Hospital_Workshop | 3D Slicer Workshop]], Mount Sinai Hospital, NYC, NY
*April 14: [[StonyBrook_Workshop | 3D Slicer Workshop]], Stony Brook University, Stony Brook, NY
*April 8-9: [[SPL25| SPL 25th Anniversary Celebration]], Harvard Medical School, Boston, MA
*April 5: Greg Sharp lecture ''3D Slicer for Radiotherapy Research'' at [http://dsmf-symposium.dk/program.html Danish Society for Medical Physics Symposium], Copenhagen, Denmark
----
*March 15-16: [http://ncigt.org/8th-ncigt-and-nih-image-guided-therapy-workshop 8th NCIGT and NIH Image Guided Therapy Workshop], Bethesda, MD
*March 13: Ron Kikinis invited presentation at [http://www.ci4cc.org/events/spring2016 Cancer Informatics for Cancer Centers (CI4CC) Spring 2016 Symposium and workshop], Napa, CA (workshop materials: http://qiicr.org/CI4CC-Spring2016-ASW)
----
*February 11: [[FAID_2016|ICM-MIT-Harvard workshop, French American Innovation Day]], MIT
----
*January 26: [http://iactalks.iac.es/talks/view/865 Ron Kikinis' invited presentation at Instituto de Astrofísica de Canarias - IAC, "Tsunami in the Procedure Room, the Growing Challenge of Managing Data in Image Guided Interventions and Surgery"]
*January 14: [[CHB|3D Slicer Workshop at Children's Hospital]], Boston, MA
*January 7: [[Events:TutorialContestJanuary2016 |2016 Tutorial Contest]], MIT
*January 4-8: [[2016_Winter_Project_Week|'''Winter Project Week''']], MIT

===2015===
*December 14-18: [[Montevideo_Uruguay_2015| 3D Slicer and SlicerIGT at Universidad de la República]], Montevideo, Uruguay
----
*November 29-December 4: [[RSNA_2015| 101th Annual Meeting of the Radiological Society of North America, RSNA 2015]], Chicago, IL
*November 26-28: [[SlicerCMFWorkshop_Italy2015 | Cranio Maxillo Facial imaging workshop using SlicerCMF]], Italy
*November 23: [[HST.583_2015_Brain_Mapping_for_Neurosurgery | Harvard-MIT Division of Health Science and Technology HST.583 Lab - Brain Mapping for Neurosurgery]]
*November 19: [[Brown_2015| 3D Slicer Workshop at Brown University]], Providence, RI
*November 16: [[MGH_2015 | 3D Slicer Tutorial]], MGH, Boston, MA
----
*October 19-21: [http://www.ci4cc.org/events/fall2015 Fall 2015 CI4CC Symposium and Workshop]: [https://goo.gl/MDq0u8 Quantitative Image Informatics for Cancer Research (QIICR) presentation by Andrey Fedorov], San Diego, CA
*October 9: [http://interactivemedical.org/imic2015/ MICCAI 2015 - Interactive MIC 2nd edition], Munich, Germany
*October 5: [http://projects.iq.harvard.edu/dtichallenge15/home MICCAI 2015 DTI Challenge Workshop - 5th edition], Munich, Germany
----
*September 14: [[HST.583_2015 | Harvard-MIT Division of Science Health and Technology HST.583 Lab- The Life Cycle of Medical Imaging Data]]
*September 1: [[Events:2015_Ron_visit|SPL Introduction and Slicer Workshop]], Szeged, Hungary
----
*August 29: Ron Kikinis Keynote Lecture "[[media:2015-09-06-Tsunami.pptx |Tsunami in the Procedure Room]]: The Growing Challenge of Managing Data in Image-Guided Interventions and Surgery" at the [http://www.iccas.de/symposium/ ICCAS International Symposium on Computer-Assisted Surgery], Leipzig, Germany (the download is about 49MB)
*August 24-25: [[Brno_visit_2015| dMRI Collaboration with CEITEC]], Brno, Czech Republic
*August 17: Ron Kikinis presented the state of 3D Slicer to BISTI, Natcher Building, NIH, Bethesda, MD ([[media:2015-11-11-Slicer-Status.pptx|download here, ~79MB]]).
*August 7-8: Steve Pieper presented 3D Slicer at [http://www.mbl.edu/imaging/escaping-flatland-workshop-2015/| Escaping Flatland: Imaging biological architecture and events in 3 dimensions], Woods Hole Marine Biology Laboratory. [http://videocenter.mbl.edu/videos/video/1123/ Video of the event] is available. Note that two feeds are available and the user can toggle between the live video and the screen.
*August 6: [[Slicer_WS_Morioka_2015| Slicer Workshop]], Morioka, Iwate, Japan
----
*July 15: [http://aapm.org/meetings/2015AM/PRAbs.asp?mid=99&aid=27746 American Association for Medical Physics: Open Libraries for Research], Anaheim, CA
----
*June 21-24: [[2015_Summer_Project_Week|'''Summer Project Week''']], Barcelona, Spain
*June 11: [[UNC_2015 | 3D Slicer Training Workshop for NeuroImaging]], University of North Carolina at Chapel Hill, NC
*June 8: [[BU_2015 | 3D Slicer Training Workshop for Radiologists]], Boston University School of Medicine, Boston, MA
*June 7: [[Autoseg_2015 | Automatic Segmentation Algorithm Workshop]], Toronto, Canada
*June 7: [[IUPESM_2015| Slicer RT Tutorial, World Congress on Medical Physics and Biomedical Engineering]], Toronto, Canada
----
*May 27: [http://qiicr.org QIICR] presentation and 3D Slicer demo at the annual meeting of the NCI [http://itcr.nci.nih.gov/ Informatics Technology for Cancer Research (ITCR)] project, UCSD, San Diego, CA
----
*April 13-14: demonstration of 3D Slicer at the annual face-to-face meeting of the NCI Quantitative Imaging Network, Rockville, MD
----
*March 30-31: 3D Slicer invited demonstrations at [http://www.ci4cc.org/events/spring2015 Cancer Informatics for Cancer Centers (CI4CC) Spring 2015 Symposium & Genomics Workshop], Bethesda, MD
*March 26: [[Shiga_2015_Workshop | 3D Slicer Workshop]], Shiga, Japan
*March 25-26: [[Shanghai_2015 | 3D Slicer Invited Workshop]], Shanghai, China
*March 24: [[Hangzhou_2015 | 3D Slicer Invited Workshop]], Hangzhou, China
*March 11: [[Construction and Superimposition of 3D Surface Models IADR 2015]], Boston, MA
----
*February 27-28: [[2015_TWMU_Seminar| Medical Device Seminar]], Tokyo Women's Medical University, Tokyo, Japan
*February 19: [[Stanford 2015|3D Slicer invited tutorial]], Stanford University
----
*January 22: [http://acoustic.univ-rennes1.fr/doku.php/mdbs2015 Deep Brain Stimulation Workshop], Rennes, France
*January 5-9: [[2015_Winter_Project_Week| '''Winter Project Week''']], Salt Lake City, UT

===2014===
*December 16-17: [[Moffitt_2014|3D Slicer Invited workshop]], Moffitt Cancer Center, Tampa, FL
----
*November 30-December 5: [[RSNA_2014| 100th Annual Meeting of the Radiological Society of North America, RSNA 2014]], Chicago, IL
*November 18-19: [[Iowa2014| 3D Slicer Workshop]], Iowa City, IA
*November 20: [[CMF_Workshop_Cleveland_2014| 3D Cranio Maxillo Facial workshop]], CWRU, Cleveland, OH
----
*October 27: [[Prof_Sugiyama_and_Dr_Oyama_visit | Prof. Sugiyama and Dr. Oyama visit at BWH]]
*October 18-22: [http://w3.cns.org/meetings/2014/ Annual Meeting of the Congress of Neurological Surgeons], Boston, MA
*October 10-11: [http://radiologie.uniklinikum-leipzig.de/radiologie.site,postext,imri,a_id,700.html 10th Interventional MRI Symposium], Leipzig, Germany
*October 4: [[Pretoria2014| 3D Slicer Workshop]] at the [http://www.pah.org.za/ Steve Biko Academic Hosptial] in Pretoria, South Africa
----
*September 18-19: 7th NCIGT and NIH Image Guided Therapy Workshop, Cambridge, MA
*September 18: [http://www.slicerigt.org/wp/miccai-2014-tutorial/ Building image-guidance systems from open-source components] tutorial at MICCAI'14, Cambridge, MA
*September 15: [[DBS_Meeting_2014 | Deep Brain Stimulation Meeting, MICCAI 2014]], Boston, MA
*September 14: [[DTI_Challenge_2014| DTI Tractography Challenge, MICCAI 2014]], Boston, MA
*September 14: [http://interactivemedical.org/imic2014/index.html IMIC 2014 at MICCAI 2014], Boston, MA
----
*August 26-30: [http://www.slicerigt.org/wp/embc-2014-tutorial/ EMBC'14 Tutorial: Building image-guidance systems from open-source components], Chicago, IL
*August 5: [[AAPM 2014 | 3D Slicer User Group at AAPM 2014]], Austin, TX
----
*July 1: [[2014_Neurotrauma_Symposium| 32nd Annual Neurotrauma Symposium: S08 Breakout Session on Advances in Multimodal Imaging of TBI]] organized by John van Horn with scientific presentations by Guido Gerig and Andrei Irimia (all NA-MIC), San Francisco, CA
----
*June 26: [http://www.na-mic.org/Wiki/index.php/2014_Tutorial_Contest Slicer Tutorial Contest, MIT, Cambridge, MA ]
*June 23-27: [[2014_Summer_Project_Week| '''Summer Project Week at MIT''']]
----
*April 15:[[Brown_University_Workshop | 3D Slicer workshop]], Brown University, Providence, RI
----
*March 28: [http://slicer.kitware.com/midas3/download/item/133719/2014-QIN_F2F-Fedorov-QIICR_Slicer.pdf Slicer/QIICR presentation] Annual Face to face meeting of the Quantitative Imaging Network, NCI, Rockville, MD
*March 19: [[CEA_2014| Follow-up meeting on the use of Slicer]] Prof. Dhenain's team, CEA Paris, France
*March 10-14: [[Pichl_2014| Winter School for Medical Physics]], Pichl-Schladming, Austria
*March 6-10: [[ECR_2014| European Congress of Radiology]], Vienna, Austria
----
*February 18-20: [[Second_Medical_Image_Registration_Retreat,_Puerto_Rico| Second Medical Image Registration Retreat]], San Juan, Puerto Rico
*February 16: [[SPIE_2014 | Grand Challenges Panel]], SPIE 2014, San Diego, CA
*February 14: [http://www.na-mic.org/Wiki/index.php/USC_2014 Slicer Training workshop], Los Angeles, CA
----
*January 27-29: [http://www.na-mic.org/Wiki/index.php/TWMU_Visit_2014 Visit by Tokyo Women's Medical University and Japan National Cancer Center], SNR Lab, BWH, Boston, MA
*January 7: [http://wiki.na-mic.org/Wiki/index.php/2014_SLC_Training_Workshop 3D Slicer Training workshop], Salt Lake City, UT
*January 6-10: [[AHM_2014| '''AHM, EAB''']], [[2014_Winter_Project_Week|'''Winter Project Week''']], Salt Lake City, UT
*January 4: [http://www.sci.utah.edu/cibcwksp2014.html Software Tools for Image Based Modeling, Simulation, and Visualization], Workshop, Salt Lake City, UT

===2013===
*December 17: [http://wiki.na-mic.org/Wiki/index.php/CEA_2013 MIRCEN/CEA Slicer event], Paris, France
*December 1-6: [[RSNA_2013| RSNA 2013]], Chicago, IL
----
*November 20: [[CMF_Workshop_Cleveland_2013| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH
----
*October 27-30:[[TWMU_Visit_2013| Visit by Tokyo Women's Medical University Visit]], SNR Lab, BWH
*October 22-23:[[QIICR_2013| QIICR brainstorming and kickoff meeting]], 1249 Boylston St., Boston
*October 17: [[Brno_2013| 3D Slicer Workshop]], Brno, Czech Republic
----
*September 30: [[Changchun_2013| 3D Slicer invited seminar]], Changchun, China
*September 29: [[Beijing_2013| 3D Slicer invited workshop, PLA Hospital]], Beijing, China
*September 26: [http://www.dkfz.de/en/mbi/ctk-miccai2013/index.html MICCAI 2013 CTK Tutorial], Nagoya, Japan
*September 22: [[MICCAI2013| MICCAI 2013 DTI Tractography Challenge on Peritumoral White Matter Anatomy for Neurosurgical Decision-Making]], Nagoya, Japan
*September 11: [[WFNS2013| Sonia Pujol's invited lectures, 15th WFNS World Congress of Neurosurgery]], Seoul, Korea
----
*August 5: [[AAPM 2013 | 3D Slicer User Group, AAPM 2013]], Indanapolis, IN
*August 1-2: [[BRAINS_CAMP| BRAINSCamp workshop]], Iowa City, IA
----
*July 19: [[Dr.Dhenain's visit to the SPL, Boston, MA |Dr. Dhenain's visit to the SPL]], Boston, MA
----
*June 26-29: [[CARS2013| 3D Slicer hands-on workshop on Image-Guided Therapy and joint Slicer/CTK/MITK workshop]], CARS 2013, Heidelberg, Germany
*June 26: [http://tbi.ci.uchicago.edu/diffusion-mri-tbi-workshop Diffusion MRI in Traumatic Brain Injury 2013; Workshop on Diffusion MRI in Traumatic Brain Injury: Software Tools and International Shared Data Repository], Heidelberg, Germany
*June 17-21: [[2013_Summer_Project_Week|'''Summer Project Week at MIT]]''', [[2013_Tutorial_Contest|Summer 2013 Tutorial Contest]]
*June 14: [[UAEM_Visit|Prof. Avila-Vilchis and Prof. Vilchis-Gonzales visiting the SPL]], Boston, MA
*June 14: [[BWH_2013| 3D Slicer Hands-on Workshop]], Surgical Planning Lab, 1249 Boylston St., Boston, MA
----
*May 31: [[AAPM_New_England_Chapter_Summer_Meeting| Invited Lecture, AAPM Chapter New England Summer Meeting]], Portsmouth, NH
*May 24: [[Kitware_Course| 3D Slicer: Visualize and Analyze your datasets, Kitware Training Course,]] Lyon, France
*May 20-24: [http://www.commontk.org/index.php/CTK-Hackfest-May-2013 CTK Hackfest], Kingston, Ontario, Canada
*May 11: [http://www.youtube.com/watch?v=9t1V-Ro0Cak SlicerIGT hands-on demo], Science Rendezvous, Kingston, Ontario, Canada
----
*April 22: [[2013_ISMRM_CardiacStudyGroup_CARMA|ISMRM 2013 Cardiac Study Group Tutorial]]: Slicer for segmentation and enhancement quantification in cardiac LGE-MRI. Salt Lake City, UT
*April 15: [[2013_Juntendo_University| DTI Challenge Presentation, Jutendo University, Tokyo, Japan]]
*April 10-11: [http://www.na-mic.org/Wiki/index.php/Iwate_2013_Training Slicer Ultrasound Workshop], Iwate, Japan
*April 9: [http://www.na-mic.org/Wiki/index.php/Tokyo_2013_Training Slicer Workshop], Tokyo, Japan
*April 8: [[Imaging_in_Neuroscience| Imaging in Neuroscience Course]], Boston
----
*March 21-23: [http://www.ncigt.org/pages/IGT_Workshop_2013 6th NCIGT and NIH Image Guided Therapy Workshop] in Crystal City, VA
*March 11: [[CIR_visit_Vienna_Medical_Center | Slicer Lecture]], Computational Image Analysis and Radiology Laboratory, Medical University, Vienna, Austria
*March 11: [[SlicerRT_workshop | SlicerRT workshop]], Medical University, Vienna, Austria
*March 8: [http://www.na-mic.org/Wiki/index.php/Autoseg_2013 Automatic Segmentation Algorithm Workshop], Boston, MA
*March 7-11: [http://www.na-mic.org/Wiki/index.php/ECR_2013 European Congress of Radiology], Vienna, Austria
*March 4-5: 3D Slicer is presented at the annual face-to-face meeting of the [http://imaging.cancer.gov/programsandresources/specializedinitiatives/qin NCI Quantitative Imaging Network ] ([[Media:3DSlicer-NCI-QIN-F2F-March2013_poster_Fedorov.ppt|poster]] and [[Media:3DSlicer-NCI-QIN-F2F-March2013_tool_sharing_slides_Fedorov.ppt|slides]])
*March 4: [[2013-03-4- TWMU_Visit| Delegates from Research Administration Office, Tokyo Women's Medical University visits SNR Lab/NCIGT and AMIGO]]
----
*February 28-March 5: [[2013_Dr_Chen_Visit | Visit of Dr. Xiaolei Chen, PLA General Hospital, Beijing]], SPL
*February 22: [[2013-02-22 Dr. Takahashi's Visit to SNR Lab/NCIGT and AMIGO|Dr. Takahashi's Visit to SNR Lab/NCIGT and AMIGO]]
*February 14: [[2013-02-14-Slicer_Demo_at_Memorial_Sloan_Kettering_Cancer_Center | Demo of the Slicer segmentation and registration tools]], Memorial Sloan Kettering Cancer Center
*February 14: [[2013-02-14-Korean_Surgical_Robot_Research_Team_Visit | Surgical Navigation and Robotics Laboratory hosts a robotic surgery research group from Korea]]
*February 9-14: [http://www.na-mic.org/Wiki/index.php/SPIE_2013_DTI_Workshop SPIE 2013 Diffusion Tensor Imaging Course], Orlando, FL
*February 7: [[2013-02-07-MGH_Slicer_user_meeting | Slicer user/developer meeting with the MGH user group]]
----
*January 31: [[GolbyLabMeeting_DTIChallenge | MICCAI DTI Challenge Presentation]], Golby Lab Meeting, Brigham and Women's Hospital, Boston, MA
*January 28: [http://www.assembla.com/wiki/show/slicerrt/20130128_slicer_matlab_personal_cloud_meeting Slicer Matlab personal cloud meeting]
*January 7-11: [[AHM_2013|'''AHM, EAB, Winter Project Week in Salt Lake City]]'''

===2012===
*December 10: [[ PNL_2012 | PNL Slicer4 Training Workshop]]
*December 3: [[HST_2012 | Harvard-MIT Division of Health Science and Technology - Diffusion Tensor Imaging Course]]
----
*November 25-30: [[RSNA_2012 | 98th Annual Meeting of the Radiological Society of North America (RSNA 2012)]], Chicago, IL
*November 14: [[CMF_Workshop_Cleveland_2012| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH
*November 8-9: [http://meetings.nigms.nih.gov/index.cfm?event=general&ID=15208 NCBC showcase event in Washington DC]: [[media:NA-MIC-Overview-2012-11.pdf|PDF of the overview slides]]
----
* October 8: [[Niguarda_Ospedale_Visit| Invited visit to the Epilepsy and Parkinson Surgery Centre "Claudio Munari" Ospedale Niguarda "Ca' Granda"]], Milan, Italy
* October 1: [[DTI_Tractography_Challenge_MICCAI_2012| DTI Tractography Challenge, MICCAI 2012, Nice, France]]
* October 1: [http://www.sci.utah.edu/stia2012-home.html 2nd International MICCAI Workshop on Spatiotemporal Image Analysis for Longitudinal and Time-Series Image Data (STIA'12]), MICCAI 2012, Nice, France
----
* September 25-26: [[Pieper-MeVis-2012-09| Steve Pieper visited MeVis]]
* September 21: [http://www.ncigt.org/pages/IGT_Workshop_2012 5th NCIGT and NIH Image Guided Therapy Workshop], Boston, MA
* September 20: [[DrShekhar_Visit_Sep_2012|Dr. Raj Shekhar's visit to NCIGT]]
* September 12: [[Universidad Autonoma del Estado de Mexico Symposium | 3DSlicer invited lecture]], First Symposium on Medical Bioengineering, Universidad Autónoma del Estado de México, Mexico City, Mexico
* September 10:''' [[HST_583_2012| Harvard-MIT Division of Science Health and Technology HST.583 - Neuroimage Analysis Lab]]
----
* August 29: [[BU_Slicer4_Training_Session| BU Slicer4 Training session]]
* August 20-21: [[Core 1 Retreat 2012|Core 1 Retreat 2012]] Park City, UT
* August 20: [[Slicer4.2Planning|Slicer 4.2 Planning meeting]]
----
* July 30: [[AAPM_2012 | 3D Slicer User Group]] AAPM, Charlotte, NC
* July 9-13: [http://www.commontk.org/index.php/CTK-Hackfest-Jul-2012 CTK Hackfest], Boston, MA
----
* June 30: [[CARS_2012 | NA-MIC IGT Workshop, CARS 2012]]
* June 18-22: [[2012_Summer_Project_Week|'''Summer Project Week at MIT''']]; [[2012_Tutorial_Contest| Summer 2012 Tutorial Contest]]
----
* May 21-22: [[Madrid-May-21-2012-Slicer-Workshop| Slicer workshop]] Madrid, Spain
* May 16: [http://www.ias.uwa.edu.au/lectures/kikinis| Public lecture, UWA], Perth, Australia
* May 14: [http://www.ias.uwa.edu.au/masterclass/kikinis Masterclass, UWA], Perth, Australia
* May 2: [http://www.hisa.org.au/events/event_details.asp?id=224112 Slicer workshop], St. Vincent's Hospital, Fitzroy, Melbourne, Australia
----
* April 30-May 1: [http://www.cs.ucl.ac.uk/opensource_mia_ws_2012/ Slicer presentation], International Symposium on Biomedical Imaging (ISBI 2012)], Barcelona, Spain
* April 26: [http://www.hisa.org.au/events/event_details.asp?id=224111 Slicer workshop], St. Vincent's Hospital, Sydney, Australia
* April 5: [[NEU-Medical-Physics-Seminar| Northeastern University Medical Physics Seminar, Gregory Sharp, Nobuhiko Hata]]
----
* March 20-21: [[Iowa-March-20-2012-Slicer-Workshop| Slicer workshop in Iowa]]
* March 16: [[Particle_UNC_Utah| Particle training seminar, UNC]] Chapel Hill, NC
* March 5-6: Slicer booth presentation at the annual [https://wiki.nci.nih.gov/display/CIP/QIN Quantitative Imaging Network] face-to-face meeting; NCI, Washington DC
----
* February 29: [[Chapel-Hill-February-29-2012-Slicer-Talk| Slicer talk]], UNC
* February 27: [[Slicer-4.1| Plans for Slicer 4.1]]
* February 14: [[TWMU_Medtronics_OpenIGTLink| TWMU Open IGT Link - Stealth station Project, Kick-off]], Tokyo, Japan
* February 5: [[SPIE_2012_DTI_Workshop| SPIE 2012 DTI Course]], San Diego, CA
----
* January 9-13: [[AHM_2012|'''AHM, EAB'']], [[2012_Winter_Project_Week|'''Winter Project Week in Salt Lake City''']]

=== 2011 ===
*November 27-December 2: [[RSNA_2011 | 97th Annual Meeting of the Radiological Society of North America (RSNA 2011)]], Chicago, IL
*November 14-18: [http://www.commontk.org/index.php/CTK-Hackfest-Nov-2011 CTK Hackfest], Sophia Antipolis, France
*November 11: [[SFN2011 Diffusion_Tensor_Imaging_Analysis Workshop |White Matter Exploration with Diffusion Tensor Imaging: Fundamentals and Perspectives - SFN 2011 Workshop]], Washington DC
*November 9: [[CMF_Workshop_Cleveland| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH
*November 3: [[2011_Slicer4-PreRSNAHackFest|Slicer4 PreRSNA Hackfest, Google hangouts]]
*November 2: [[BWH_Resident_Fair| 3DSlicer exhibit]], BWH Resident Fair, Boston, MA
----
*October 20: [[2011_Slicer4-Documentation-Sprint|Slicer4 Documentation Sprint]]
*October 14-15: [[2011_Algorithms_Retreat|Algorithm Core Retreat in New England]]
*October 12-13: [http://www.ncigt.org/pages/IGT_Workshop_2011 NCIGT Workshop], Washington DC
----
*September 28: [http://wiki.na-mic.org/Wiki/index.php/Event:Journal_Club_at_BWH Journal Club talk: Seyed-Ahmad Ahmadi]
*September 26-28: [[Events:2011_Hungary_Slicer_Training|Programming and End-User Training]] Szeged, Hungary
*September 18: [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge_MICCAI_2011 DTI Tractography for Neurosurgical Planning: A Grand Challenge - MICCAI 2011 Workshop], Toronto, Canada'''
----
*August 4: [[Events:UBC_3D_Slicer_workshop_August_2011|UBC 3D Slicer workshop August 2011]]
*August 2: [[Events:2011-08-02-AAPM-Slicer-Users-Group-Meeting|3D Slicer users group meeting]], AAPM annual meeting, Vancouver, BC, Canada]]
----
*July 19-21: [[Events:Slicer4-Review-07-2011 | Slicer 4 Review and Programming Sprint]], 1249 Boylston St., Boston, MA
----
*June 26-30: [[Events:3DSlicer_Booth_OHBM_2011 | 3DSlicer Booth, OHBM 2011]], Quebec City, Canada
*June 20-24: [[2011_Summer_Project_Week|'''Summer Project Week at MIT''']]
*June 15: [[Events:2011-06-15-Robarts-Slicer-Workshop|Slicer Workshop]], Biomedical Imaging Research Centre, University of Western Ontario, Canada
*June 13: [http://www.na-mic.org/Wiki/index.php/Summer_2011_Tutorial_Contest Summer 2011 Tutorial Contest] Submission dead-line.
*June 7: [[Events:2011-06-07-UCSF-Diffusion-Imaging-Workshop|UCSF Diffusion Imaging Workshop]], San Francisco
----
*May 5: [[Events:Computational_Methods_for_Radiation_Oncology|Computational Methods for Radiation Oncology]], Boston, MA
----
*April 27: [[Events:Slicer-Hands-On-Hiroshima-2011|Slicer and OpenIGTLink Hands-on Training]], Hiroshima, Japan
*April 22: [[Event:2011-04-UtahDBP-Training|Slicer Hands-on Training For The Utah Afib Team]]
*April 12: [[Event:2011-04-DiMaioTalk|Talk by Simon DiMaio "da Vinci and Beyond"]]
*April 5: [http://www.na-mic.org/Wiki/index.php/Events:_Johns_Hopkins_University_Seminar_April_2011 Training Workshop], Johns Hopkins University, Baltimore, MD
----
*March 16-18: [http://vizbi.org VIZBI 2011] in Cambridge, MA includes NAMIC-affiliated speakers and VTK tutorials.
*March 15-16: [http://catalyst.harvard.edu/services/ittm/module1.html Harvard Catalyst Biomarkers and Imaging in Drug Development course] includes [[media:Pieper-Image Processing Strategies.pptx|a presentation on image processing approaches]] including NA-MIC and 3D Slicer.
*March 11: [[CTSC:Slicer_handson.021810| 3D Slicer Quantitative Medical Image Data Visualization Hands-On Workshop, Countway Room 403, (12-1pm)]]
*March 4: New [http://www.slicer.org/slicerWiki/index.php/Slicer3:3.6_Final_Issues#DONE:_Issues_fixed_for_inclusion_in_Slicer_3.6.3_--_included_in_release_builds_of_March_4.2C_2011 Slicer3.6.3 Patch Release]
----
*February 19-23: [[Event:2011_Registration_Retreat|Registration Retreat]]
*February 18: [[CTSC:Slicer_handson.021810| 3D Slicer Quantitative Medical Image Data Visualization Hands-On Workshop]], Harvard Countway Library room 403, (12-1pm)
*February 7-11: [http://www.commontk.org/index.php/CTK-Hackfest-Feb-2011 CTK Hackfest], Chapel Hill, NC
*February 4: [[Media:Fedorov-MGH-4Feb2011.pdf|Presentation of 3D Slicer for the MGH tumor measurement group]]
----
*January 10-14: '''[[AHM_2011|AHM, EAB]]''', [[2011_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

=== 2010 ===
*December 8: [[Events:Manchester-Dec-2010|Slicer workshop]], Manchester, UK
*December 6-7: [[Events:Dundee-Dec-2010|Slicer workshop]], Dundee, UK
----
*November 28-December 3: RSNA 2010, The 96th Annual Meeting of the Radiological Society of North America, Chicago IL
**November 29: 2:30 pm-4:00 pm: [[Events:RSNA_2010| 3D Interactive Visualization of DICOM images with Slicer]], Chicago IL
**November 30: 10:30 am-12:00 pm: [[Events:RSNA_2010_CTSA| Quantitative Medical Imaging for Clinical Research and Practice]], Chicago IL
**December 2: 10:30 am-12:00 pm: [[Events:RSNA_2010_didactic| Lifecycle of an imaging biomarker: from validation to dissemination]], Chicago IL
* November 17-18: [[EngineeringRetreat2010|Engineering Core retreat]]
* November 12: [[MGH-NA-MIC-2010-Kickoff|MGH Kick-off meeting with Algorithms and Engineering]]
* November 8-9: [[2010-WestCoastMaster|West Coast Events]]
* November 5-6: [[AlgorithmRetreat2010|Algorithm Core retreat]]
* November 4-6: [[WidgetDesign2010|Widget Design Fiesta]], Kitware, South Carborro, NC
* November 4-5: [[media:HataJJTalkNov2010.pdf |Robotics Presentation by Noby Hata]], Advances in Surgical Technologies Symposium, Celebration, FL
----
* October 25-26: [[Iowa-NA-MIC-2010-Kickoff| Iowa NA-MIC Kickoff meeting (UNC Core 1 visit)]]
* October 18:[[HST_583_2010_DTI_Course| Harvard MIT Division of Health Sciences and Technology - Diffusion Tensor Imaging Lab]]
----
* September 24: [http://lcib.rutgers.edu/miccai2010/ Prostate Cancer Imaging Workshop] MICCAI 2010, Beijing, China
* September 23: [http://www.grand-challenge.org/index.php/MICCAI_2010_Workshop Workshop on Medical Image Analysis for the Clinic - A Grand Challenge]
* September 23: [[Beijing_2010_NA-MIC_Workshop|Slicer Tutorial]], Chinese PLA General Hospital in Beijing, China
* September 20: [[MICCAI_2010| NA-MIC Tutorial]], MICCAI 2010, Beijing, China
* September 13: [[HST_583_2010| Harvard MIT Division of Health Sciences and Technology - Neuroimage Analysis Lab]]
----
* August 12-13: [[QtAugust2010| Review of Qt port]]
* August 11: [[2010-Slicer-UNCDuke|Slicer training event]], UNC and Duke
* August 10: [[2010-Sato-talk|Research retreat of SNR Laboratory, followed by Dr. Yoshinobu Sato's talk]]
* August 5: [http://www.termine-meduniwien.at/mediafiles/38/Vortragsankuendigung_Prof_Ron_KIKINIS_05082010.pdf?sid=4f2a2b592fc7004cea39a34993b1d72d Presentation], AKH, Vienna, Austria
----
* July 1: [[2010-Slicer-StLouis|Slicer training event in St. Louis]]
----
* June 26: [[2010_CARS| NA-MIC Tutorial]], Computer Assisted Radiology and Surgery Conference in Geneva, Switzerland
* June 22" [http://www.na-mic.org/Wiki/index.php/Summer_2010_Tutorial_Contest Slicer Tutorial Contest, MIT, Cambridge, MA]
* June 21-25: '''[[2010_Summer_Project_Week|Summer Project Week at MIT]]'''
* June 18: [[2010_CCA_Retreat|Clinical Computational Anatomy one day retreat]], Boston, MA
----
* May 20-23:[[cscbce_2010 | 5th Canadian Student Conference
on Biomedical Computing and Engineering]]
* May 17-21: [http://www.commontk.org/index.php/CTK-Hackfest-May-2010 CTK Hackfest], Georgetown University
* May 12: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Registration Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA
----
* April 29: [[2010_Slicer36_Module_Cull|Review of modules to keep and cull for the 3.6 release]]
* April 28: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Visualization Hands-On Workshop]], Countway Library, Harvard Medical School, Boston, MA
* April 9-10: [[2010_University.of.Iowa| NA-MIC Training Workshop]], University of Iowa
* April 7: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Registration Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA
----
* March 24: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Visualization Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA
* March 19: [[U-Tokyo-visit-03192010| NCIGT Workshop with delegates from University of Tokyo]], Brigham and Women's Hospital, Boston, MA
* March 16: [[Events:Slicer-Hands-On-Tokyo-2010| Image Guided Therapy research using 3D Slicer - Hands-On Workshop]], Tokyo Women's Medical University, Tokyo, Japan (page in Japanese)
* March 10: [http://summit2010.amia.org/session-details NA-MIC Presentation], AMIA 2010
* March 9: Registration Clinic at [http://www.ncigt.org/pages/IGT_Workshop_2010 IGT Workshop], Arlington, VA
* March 7-10: Several NA-MIC personnel are participating in [[Events:CTK-Pre-Hackfest-2010|The CTK Pre-Hackfest]], Heidelberg, Germany. This meeting is a kick off that is expected to lead to active working meetings similar to the NA-MIC Project Week activities. The meeting is organized by the [http://commontk.org CTK] group.
* March 3: Steve Pieper presents on "Visualizing Anatomy and Function from MRI Data", [http://vizbi.org/2010/ the 2010 EMBO Workshop on Visualizing Biological Data]. NA-MIC Wiki page with [[VIZBI2010|Supplemental information from the VIZBI Conference]]. [http://www.nature.com/nmeth/journal/v7/n3s/index.html A special edition of Nature Methods] contains papers by the presenters.
----
* February 24: [[CTSC:Slicer_handson.022410| 3D Slicer Medical Image Data Visualization Hands-On Workshop]], Countway Library, Harvard Medical School, Boston, MA
* February 14: [[Events:CTK-Workshop-SanDiego-2010| 4th CTK workshop]], SPIE, San Diego, CA
* February 9: [[Hata_BBN_visit|Hata BBN lecture]]
----
* January 4-8: '''[[AHM_2010|AHM, EAB'''], [[2010_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

===2009===
* December 16-17: [[Dec-2009-SlicerAIMBrainstorming|Slicer Annotation and Markup Brainstorming]]
* December 15: [[Dec-2009-SlicerXND-DesignAndEngineering | Slicer/XND Preliminary Design & Engineering Planning Session]], WUSTL]]
* December 1: [[Events:RSNA_CTSA_2009| CTSA]], RSNA, Chicago, IL
----
* November 30: [[Events:RSNA_2009| 3-D Interactive Visualization of DICOM images with Slicer - RSNA 2009]], 95th Annual Meeting of the Radiological Society of North America, Chicago, IL
* November 29: [[Events:CTK-Workshop-Chicago-2009| 3rd CTK workshop]], RSNA, Chicago, IL
* November 23: [[CTSC:Slicer_handson.112309| 3D Slicer Medical Image Data Visualization Hands-On Workshop]], , Countway Library, Harvard Medical School, Boston, MA
----
* October 16: [[SFN2009 Slicer DTI Workshop | Mapping the Brain with Diffusion Tensor Imaging - A Hands-On Workshop]] [http://www.sfn.org/am2009/ Annual Meeting of the Society of Neuroscience], Chicago, IL
* October 9: [[Events:VT-NAMIC-NCBC-Collaboration-meeting-2009| VirginiaTech-NA-MIC collaboration progress update and planning meeting]], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA
----
* September 30: [[CTSC:ACRIN 09/30/09| Quantitative imaging workshop]] ACRIN fall meeting, Arlington, VA. Workshop in collaboration with Duke University and Johns Hopkins.
* September 25: [[Events:CTK-Workshop-September-2009| 2nd CTK workshop]], Oxford UK
* September 24: [http://campwww.informatik.tu-muenchen.de/AMIARCS09/doku.php Augmented Environments for Medical Imaging including Augmented Reality in Computer-Aided Surgery (AMI ARCS)] MICCAI 2009 workshop, London, UK. Demonstration of the [[DBP2:JHU:PerkStation | Perk Station]]. One-on-one tutorial available [mailto:lasso@cs.queensu.ca] on request.
* September 24: [http://smarts.lcsr.jhu.edu/CAI-Workshop-2009 Systems and Architectures for CAI] MICCAI 2009 workshop, London, UK. Presentation of the [[DBP2:JHU:Roadmap | computer assisted intervention plug-in module for 3D Slicer]].
* September 24: [http://www.cs.ucl.ac.uk/miccai/dmfc Diffusion Modelling and the Fibre Cup] MICCAI 2009 workshop, London, UK. Presentation of the DTI tractography validation pilot study.
* September 20-24: [http://wiki.na-mic.org/Wiki/index.php/2009_prostate_segmentation_challenge_MICCAI Prostate MRI Segmentation Challenge"], [http://grand-challenge2009.bigr.nl/index.php MICCAI 3D Segmentation in the clinic: a grand challenge].
* September 20: [http://lmi.bwh.harvard.edu/DMRI09 MICCAI 2009 Tutorial in London: Trends in High Angular Resolution Diffusion Imaging and Brain Tissue Modelling]
* September 20: [http://people.csail.mit.edu/pohl/pmmia09.html MICCAI 2009 Workshop: Probabilistic Models for Medical Image Analysis]
* September 20: MICCAI Workshop on Information theoretic similarity measures for image registration and segmentation
* September 16-17: [[Sept-2009-SlicerWidgetsBrainstorm|Brainstorming Session on next generation widgets for Slicer]]
----
* August 25: [[Events:Slicer_Workshop_August_2009|Slicer Workshop]] at [http://www.ibmisps-worldcongress.org/precongress.asp IBMISPS], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA
* August 21: [[Events:Registration_Summit_August_2009|Registration Meeting]], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA
----
* June 29: [[Events:CTK-Workshop-June-2009|Common Toolkit Workshop]], [http://www.dkfz.de/index.html DKFZ, Heidelberg, Germany, hosted by the [http://www.dkfz-heidelberg.de/en/mbi/index.html MBI].
* June 28: [http://www.biomedicalimaging.org/2009/Tutorial_04.asp Tutorial on Statistical Shape Analysis: Theory, Software, and Applications] at [http://www.biomedicalimaging.org/2009/default.asp ISBI 2009], Boston, MA.
* June 25: [[Events:TutorialContestJune2009 | Summer 2009 Tutorial Contest]]
* June 22-26: '''[[2009_Summer_Project_Week|The FIRST JOINT Summer Project Week at MIT]]'''
* June 17: [[CAOS2009_Slicer Workshop| Hands-On Workshop for Slicer IGT for Computer Aided Orthopeadic Surgery]]
* June 17: [[SlicerKyusyuJune2009Lecture| Lecture and demonstration, Image Guided Therapy of abdominal organs]], Noby Hata, Kysyu University Medical School, Kyusyu, Japan
* June 16: [[SlicerNagoyaJune2009Workshop| Workshop: How to make your custom IGT software using 3D Slicer]], Noby Hata, Nagoya Institute of Technology, Nagoya, Japan
----
* May 11-12: Core 1 PI meeting, Georgia Tech.
* May 8: [http://www.na-mic.org/Wiki/index.php/IMFAR2009 IMFAR 2009] - [http://www.autism-insar.org/index.php?option=com_content&task=view&id=36&Itemid=105 Presentation], 8th Annual International Meeting for Autism Research (IMFAR) in Chicago, IL] entitled Use of the Slicer3 Toolkit to Produce Regional Cortical Thickness Measurement of Pediatric MRI Data".
* May 8: Focus session on [[Volume Rendering and Loadable Modules: (Engineering & Usability Notes)]].
* May 4-5: Core 1 / Core 2 visit at Georgia Tech ([[May 4, 2009 Notes]], [[May 5, 2009 Notes]]).
----
* March 19: [[NCI Slicer Tutorial 03-19-2009|NCI Slicer tutorial, ]] We had to reschedule! New date TBD!
* March 4: [[2009-03-04-Editor-Usability|Interactive Editor usability]] session in Ron's office
----
* February 24: 1249 Boylston: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Using3.4 Afternoon session to walk through common Slicer3.4 usage scenarios]
* February 24: BWH (location: Mellins Library) [[BWH_RadiologyResident_Training2009.1| NA-MIC 3D Slicer 3.2 Hands-On Workshop]]
* February 17-20: [[GWE_MiniRetreat|GWE Mini Retreat]], Boston, MA
----
* January 28-30: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat_January_28-30,2009 Slicer3 MiniRetreat]
* January 7: [[Events:TutorialContestJan2009| Winter 2009 Tutorial Contest]]
* January 5-9: '''[[AHM_2009| AHM,]] [[2009_EAB|EAB,]] [[2009_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

=== 2008 ===
* December 15-16: [[2008_Engineering_review_at_UNC|2008 Engineering review]], UNC, Chapel Hill
* Fall Semester 2008 Ibanez and Schroeder teach [http://public.kitware.com/OpenSourceSoftwarePractice/index.php/Main_Page Open Source Software Course], Rensselaer Polytechnic Institute
* December 8-12: [[2008_IGT_Project_Week|IGT Hands-on Project Week]], Boston
* December 1: [[Events:RSNA2008| Tutorial]], RSNA]], [http://rsna2008.rsna.org/ RSNA conference website]
----
* November 15-19: [[NA-MIC_Lupus_DBP_Worskhop_SFN2008|NA-MIC Lupus DBP White Matter Lesion Tutorial Release at 2008 Society for Neuroscience Annual Meeting]], Washington, DC
* November 18: [[Slicer3_Q&A_2008-11-18|Slicer Q&A Session]], BWH
* November 4: [[NA-MIC_3D_Visualization_Workshop_Massachussetts_General_Hospital|NA-MIC 3D Visualization Workshop]], Massachusetts General Hospital, Boston, MA
----
* October 30 : [[NA-MIC_3D_Visualization_Workshop_Brigham_and_Women's_Hospital| NA-MIC 3D Visualization Workshop]], Brigham and Women's Hospital, Boston, MA
* October 28: [[Harvard_Medical_Education_Day | Harvard Medical Education Day]], Boston, MA
* October 21: Nobuhiko Hata talk, entitled "Role of Image Processing, Navigation and Robots in MRI-guided Intervention", Bioimaging Sciences Division, Department of Radiology, Yale University School of Medicine, New Heaven, CT
* October 17: Nobuhiko Hata talk, entitled "Role of Image Processing, Navigation and Robots in MRI-guided Intervention", Robarts Institute, University of Western Ontario, Ontario, Canada
* October 15-16: [[Robarts_Training_Session | NA-MIC kit training event at The University of Western Ontario]], London, Ontario, Canada
* October 7: [[Stefan_Baumann_visit | Stefan Baumann, Novartis]], 1249 Boylston St., Boston, MA
* October 7: [[Slicer_Day_October_2008|Slicer in the Fall]], 1249 Boylston St., Boston, MA
----
* September 10: [[Miccai_2008_Tutorial| Interfacing third-party software with the NA-MIC Kit]]: Tutorial at MICCAI 2008, New York City
* September 10: [[Miccai_2008_Prostate_Workshop| Prostate image analysis and computer-assisted intervention]]: Workshop at MICCAI 2008, New York City
* September 6: [[Miccai_2008_Systems_and_Architecture_Workshop| Systems & architecture for computer]] Workshop, MICCAI 2008, New York City
* September 6: [[Miccai_2008_Segmentation_Workshop| Segmentation in the Clinic Challenge]]: Workshop at MICCAI 2008, New York City
* September 3: [[Stanford_2008_Slicer_Workshop| Slicer Training]], Stanford University, CA
----
* August 21-22: [[Events:August2008XNATDesktop|Visit by WashU Developers to Boston for Discussions of XND]]
* August 15: [[Events:NCI_Workshop_August_2008|August 15 2008, NA-MIC Workshop]], NCI
* August 13-14: [[Events:August_2008_NCBC_AHM|NCBC all hands meeting]]
* August 1: [[Events:August2008XNATDesktop| Planning TCon for XNAT Desktop Slicer interface]]
----
* July 30-August 1: [[2008_July_RFA_Experiment_Georgetown | RFA Interventional Experiment]], Georgetown University
* July 17: Steve Pieper presented NA-MIC and Slicer Module development at the [http://www.ipam.ucla.edu/programs/mbi2008/ IPAM MBI] Summer School [[Media:Pieper-UCLA-MBI-2008-07-17.ppt|(Slides)]]
* July 10 or 11: [[2008 July Slicer Introduction to Princess Margaret Hospital|Slicer Introduction]], Princess Margaret Hospital
----
* June 30: Steve Pieper presented at the [http://www.nitrc.org NITRC] all hands meeting.
* June 26: [[2008_June_IGT_Tumor_Growth_Model_Demo_SPL|Tumor Growth Model Software Demo]], SPL
* June 23-27: [[2008_Summer_Project_Week|'''Summer Project Week at MIT''']]
* June 23: [[2008_July_Slicer_IGT_VV_Link_Session_II|Slicer IGT Integration with Brainlab via VVLink]]
* June 16-17: [[2008 June Workshop Germany |Training Event]], Germany
* March - June: [[3D_Ultrasound_Module_in_Slicer_3|Slicer IGT training for graduate students at SJTU, Shanghai, China (every Thursday 10 am - noon)]]
----
* May 22-23: [[2008_Core_1_Core_3_mtg|Cores 1-3 Technical Meeting]], Utah
* May 21: [[2008_Core_1_UNC_Utah_DTI| Core 1 UNC & Utah Technical Meeting about DTI tool development]], Utah
* May 21: Kilian Pohl presented on segmentation tools in 3D Slicer at the [http://www.dkfz.de/en/mbi/index.html Division of Medical and Biological Informatics, DKFZ, Germany] ([[media:Pohl_dkfz_08.pdf | Slides]])
* May 12: [[Events:May12_2008_FirstMondaySeminar | First Monday Seminar Talk given by Drs. Ichiro Sakuma and Nassir Navab]], Brigham and Women's Hospital,
* May 8: [[Events:2008_05_08_Collaboration_UWA_Perth|Conference Call to Explore Collaboration with Adam Wittek]], UWA, Perth, Australia
* May 2: [[2008_5_2_Hata_Talk_U_Michigan | Nobuhiko Hata's talk]], Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI
----
* April 14: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Slicer3_Workshop_UNC_Chapel_Hill_2008#Preparation_for_the_Workshop Full day Slicer 3 Users and Plug-in Workshop] hosted by UNC-Chapel Hill faculty
* April 7: [[2008_David_Hawkes|2008 Dr. David Hawkes of UCL's visit to SPL]]
----
* March 31-April 11: [[2008_Platel_visit_from_TUE|2008 Dr. Platel's, IGT grp leader from Technical University Eindhoven, to SPL]]
* March 24-27: [[2008_Engineering_review_at_Utah|2008 Engineering review]], Utah
* March 19: [[Events:HST-563-March2008|Harvard-MIT Division of Health Sciences and Technology (HST), Lecture on Interventional MRI by Hata, Kikinis, HST 563]]
* March 12: Steve Pieper presented on the NA-MIC Kit and 3D Slicer at the [http://www.cisst.org/wiki/Seminar_2008_03_12_3D_Slicer Johns Hopkins CISST] ([[media:Pieper-JHU-seminar-2008-03-12.ppt | Slides]])
* March 10-11: [[IGT:March_2008_IGT_Workshop|IGT Workshop, Rockville, MD]]
* Discussion of NA-MIC Kit for Cardiac EP with [http://www.bidmc.harvard.edu/cmr BIDMC].
----
* February 20: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Spring-2008-User-Training#Preparation_for_the_Workshop Spring 2008 Slicer3 User Training Workshop ] at the SPL 1249 Boylston St, Boston
* February 5-7: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat Slicer3 Mini-Retreat, Boston]
----
* January 7-11: '''[[AHM_2008| AHM,]] [[2008_EAB|EAB,]] [[2008_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

=== 2007 ===
* December 12-14: [[2007_December_Slicer_IGT_Programming|Slicer IGT Programming Event]]
----
* November 2: [http://www.insightsoftwareconsortium.org/wiki/index.php/2007_MICCAI_Open_Workshop Third Annual Open Source Workshop at MICCAI]
----
* October 16-17: [http://nbirn.net/about/current/ahm2007.shtm BIRN AHM] Query Atlas and Qdec interfaces in Slicer 3 presented at the BIRN AHM.
* October 14-20: [[2007_October_Collaboration_Visit_Robert_Israel|Robert Israel Collaboration Visit to the Surgical Planning Laboratory]]
** [http://wiki.na-mic.org/Wiki/index.php/Slicer3:Module:QueryAtlas See this page] for links to QueryAtlas slides, movies and example datasets.
** [http://wiki.na-mic.org/Wiki/index.php/Image:Slicer3QDEC_AHM2007.ppt See this page] for links to Qdec slides.
* October 1-2: [[SanteFe.Tractography.Conference | Contrasting Tractography Methods Conference, Santa Fe]]
----
* September 12: [[Engineering:September 12, 2007 | Engineering End of Summer Meeting]]
* September 11: [[GPU.Enabled.Tools.Meeting | GPU-enabling of NA-MIC Algorithms, Boston]]
----
* August 21: [[DBP2:UNC:Cortical Thickness Roadmap | UNC DBP Roadmap Tcon]]
----
* June 25-29: '''[[2007_Programming/Project_Week_MIT|Summer Project Week at MIT]]'''
* June 9: [[Training:OHBM2007_Training_Workshop|OHBM DTI Training Workshop, Chicago]]
* June 1: [[2007_Pohl_at_CCB|Pohl Talk]], CCB: A Hierarchical Segmentation Algorithm for MR Brain Images
----
* May 29-31: [[2007_Core_1_Meeting|Annual Core 1 Workshop]], Boston
----
* April 24: Steve Pieper presented Slicer3 and the NA-MIC Kit to the [http://gray.mgh.harvard.edu/content/index.php Medical Physics group at MGH] [http://wiki.na-mic.org/Wiki/images/9/9c/Pieper-MGH-medical-physics-2007-04-24.ppt (slides)]
----
* March 29-30: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat_March_29%2C_30%2C_2007 Slicer3 Mini-Retreat], Boston
----
* February 21-22: Vince Calhoun from MIND is visiting at MIT and MGH [http://www.csail.mit.edu/events/eventcalendar/calendar.php?show=event&id=1349 Talk announecement]
* February 3 and 10: [http://mri.radiology.uiowa.edu/mediawiki/index.php/ITK_Programming_Short_Course_-_Feb_2007 Iowa ITK Programming Short Course]
* February 7-8: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat Slicer3 Mini-Retreat], Boston
----
* January 29: [[P41-2007-Joint-Retreat | CFIT NAC P41 2007 Joint Retreat]]
* January 16: [[2007-01-16 Core 5, Core 6 Summit]]
* January 10-12: '''[[AHM_2007|AHM, EAB, Winter Project Half Week in Salt Lake City]]'''

=== 2006 ===
* December 12: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Alpha-release Slicer3 retreat], Kitware, Inc.
----
* November 15: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Usability Usability session with PNL], BWH]
* November 7-8: [[2006_November_Meshing_Project_Visit| Meshing Collaborator Project Visit to BWH]]
* November 1: [[Training:User_Workshop_Fall_HCNR_2006| NA-MIC Training Workshop at the Harvard Center for Neurodegeneration and Repair]], Boston
----
* October 26: [[Oct-26-2006-MIND-visit_Visiting_the_MIND_institute|New DBP MIND Institute Visit]]
* October 23-26: [http://www.nbirn.net/press/current/ahm2006.shtm <nowiki>| BIRN All Hands Meeting</nowiki>]
* October 19-20: [[IGT:October_2006_IGT_Workshop| NCIGT Workshop on Open System Architectures for Image-Guided Therapy]]
* October 17: [[Core1-3-meeting-2006|Coordination meeting]] between Core 1 and Core 3 to plan the specifics for the third and last year of the current DBP's
* October 1: [http://www.insightsoftwareconsortium.org/wiki/index.php/2006_MICCAI_Open_Workshop MICCAI_2006 Open Source Workshop], MICCAI 2006, Copenhagen, Denmark
----
* September 19-20: [[2006_September_Slicer3_Update| Slicer 3 Update Meeting]], Boston, MA
* September 14-15: We have been invited to participate in [http://usms.nist.gov/workshops/bioimaging.htm NIH Workshop on Standards in Change Measurement]. This workshop will potentially set the stage for additional workshops that focus on Image Guided Interventions and Open Source standards.
* September 6: [http://www.ibmisps.org/pdf/InformationparticipantsANGLAIS.pdf 2006 IBMISPS conference:] [[Media:Kikinis-IBMISPS-09-06-2006.ppt|talk]] by [[media:Kikinis-FOSS.ppt|R. Kikinis on FOSS]] ([[2006 FOSS Abstract Kikinis]])
----
* July 19: [[Training:NLM_Workshop_2006| NA-MIC Training Workshop]], NLM
* July 17-19: [[NIH:_2006_All_NCBC_Meeting| All NCBC All Hands Meeting, NLM
* July 13-14: [http://bsp.csie.nctu.edu.tw/lssa06/ 2nd IEEE-NLM International Life Science Systems and Applications Workshop, Lister Hill Auditorium, NIH, chaired by Stephen Wong, co-sponsored by IEEE, NLM, and NAMIC]
* July 2: Ron Kikinis [[Media:NA-MIC-Kit-07-01-2006.ppt| presentation]] (28MB ppt file) at the [http://www.future-cad.org/fcad/Docs/CFP_for_2nd_Int_Sympo_2006_ver3.2.pdf The 2nd International Symposium on Intelligent Assistance in Diagnosis of Multi-Dimensional Medical Images ]
----
* June 26-30: '''[[2006_Programming/Project_Week_MIT|Summer Project Week at MIT]]'''
* June 8-9: [[Georgia_Tech_visit_to_UNC%2C_June_8-9|Georgia Tech visit to UNC: Shape Analysis Discussion]]
* June 5: [http://www.slicer.org/slicerWiki/index.php/Slicer:Slicer3-June-5-2006-Retreat Slicer 3 Retreat]
----
* May 30: [http://www.cimit.org/forum/forum.html CIMIT Forum] with Steve Pieper and Luis Ibanez ([[Media:CIMIT-BIRN-update-2006-05-30.ppt| Steve's Slides]])([[Media:CIMIT-2006-IGSTK-InsightJournal.ppt| Luis' Slides]])
* May 26: [[Training:DTI_Workshop|UNC-Chapel Hill NA-MIC DTI Analysis Training Workshop]]
* May 23-24: [[Algorithms:Core1Visit_May06| NA-MIC Core 1 meeting]], UNC]]
* May 19: [[Slicer:StevePieper_RonKikinis_VisitToDartmouth_051906|Steve Pieper and Ron Kikinis Visit to Dartmouth]]
* May 15: [[DBP:Harvard:Collaboration:GTech#Progress|Delphine Nain]], PNL
----
* April 27: [[Training:NIH_Workshop_2006|NA-MIC Training Workshop]], NIH
* April 24: [http://www.nimh.nih.gov/neuroinformatics/springagenda2006.cfm The Human Brain Project: Linking Within and Beyond] Natcher Conference Center, NIH Campus, Bethesda, Maryland: National Alliance for Medical Image Computing: Science & Technology of One National Center for Biomedical Computing [[Media:NA-MIC_Kit_revised.ppt| (this is a slightly modified version of the presentation)]]
* April 12-13: [[DBP:Harvard:Collaboration:Toronto|James Kennedy and Aristotle Voineskos at the PNL]]
* April 10-11: [[Training:MIND_Institute_Workshop_Spring_2006| NA-MIC Training Workshop]], MIND Institute, NM
* April 10-11: Steve Pieper presented the NA-MIC Kit at [http://www.biomedicalimaging.org ISBI] 2006 on April 7, 2006 ([[Media:NA-MIC-2006-04-07-ISBI.ppt| Slides]], [[Media:Pieper-ISBI-2006-revised.pdf| Paper]]).
* April 3-4: [http://www.slicer.org/slicerWiki/index.php/Slicer3:_Alpha1_Meeting Design Review and Work meeting on Slicer3 (alpha1 release)]
----
* February 22-24: [[Engineering:Slicer3_and_GPU| Meeting at Kitware to discuss Slicer3 (Thursday) and GPU programming (Friday)]]
* February 22: [[DBP:Sylvain_Doug_visit_Dartmouth_Feb_22_2006|Sylvain Bouix to visit Dartmouth]]
* February 20-23: [[IGT:Workshop_Feb_2006|IGT and FUS Workshops]]
----
* January 24: [[Training:User_Workshop_SPL_Winter_HCNR_2005| HCNR User Training Workshop]], Surgical Planning Laboratory, Boston, MA
* January 8-13: '''[[AHM_2006:AHM_2006| AHM, EAB, Winter Project Week in Salt Lake City]]'''

=== 2005 ===
* December 20: [[DBP:Marek_Kubicki_visit_Dartmouth_December_20_2005| Marek Kubicki visit to Dartmouth]]
* December 17: [[Collaboration:GT-UCI| Jim Fallon from UC Irvine visit to Georgia Tech for work on Rule-Based Segmentation]]
* December 14: [[DBP:Andy_Saykin_visit_BWH_December_14_2005|Andy Saykin and Group visit to Brigham and Women's Hospital]]
* December 1: [[DBP:Dartmouth_Harvard_Slicer_Training_12_01_2005| Dartmouth Group Slicer Training Followup at Harvard]], 1249 Boylston St., Boston, MA
----
* November 27-December 2: [http://rsna2005.rsna.org/rsna2005/V2005/index.cvn RSNA 2005, Chicago: Slicer session], Open source imaging tools workshop
* November 18: [[DBP:Harvard:Collaboration:GTech#Progress|Ramsey Al-Hakim at the PNL]]
* November 17-18: [[Collaboration:GT-Kitware|John Melonakos at Kitware -- Bayesian Classification Filter addition to ITK]]
* November 16: [[IGT:2005_Nov_16_IGT_Consortium_Kickoff| IGT Consortium Kickoff]]
* November 16: [[Collaboration:UNC-UCI|Jim Fallon and Martina from UC Irvine visit to UNC on DTI tools and clinical projects]]
* November 15: [[Engineering:Slicer3.0_November_15_2005| Slicer 3.0 Meeting]], Surgical Planning Laboratory, Boston, MA
----
* October 29: [[Dissemination:MICCAI_Workshop_2005|ISC and NA-MIC Workshop on Open Source Toolkits, Applications, and their uses in Medical Image Analysis]], MICCAI 2005, Palm Springs, CA
* October 29: Informal NA-MIC Lunch, MICCAI 2005, Palm Springs, CA
* October 20: [[2005_AHM:_3D_Slicer/Freesurfer_Workshop|Slicer Training Workshop, AHM BIRN]], San Diego, CA
* October 7: [[Collaboration:UNC-PNL|UNC visit at the Psychiatry NeuroImaging Laboratory]]
* October 5-7: [[Dissemination:EPFL_Workshop_2005| Advanced ITK and Slicer Workshop]], Swiss Federal Institute of Technology (EPFL), Lausanne, Switzerland
----
* September 30: [[Training:User_Workshop_SPL_Fall_2005|User Training Workshop]], Surgical Planning Laboratory, Boylston St, Boston, MA
* September 26-28: [[Engineering:Core_3_Programming_Week#1_Feedback|DBP and Engineering Session on Feedback from Programming Week Projects, and Planning the next 6-months]]
* September 16: [[Training:User_Workshop_MGH_Summer_2005| User Training Workshop]], MGH
----
* August 11: [[Dissemination:CSB2005|Invited Lecture about NA-MIC]]
----
* July 20: [[Collaboration:Workshop_July_20_2005|UNC visit of Georgia Tech for collaborative work on shape and DTI algorithms]]
----
* June 27-July 1: [[Engineering:Programmers_Week_Summer_2005| '''Summer Project Week at MIT''']]
* June 22-23: [[Dissemination:NCRR_NIBIB_PI_Meeting_June_22-23_2005|NCRR/NIBIB PI Meeting]]
* June 16-19: [[Collaboration:Workshop_June_16-19_2005|Georgia Tech visit of UC-Irvine for collaborative work on anatomically accurate algorithms.]]
----
* May 26-27: [[Dissemination:Workshop_May_26-27_2005|User Training and Dissemination Workshop]], at Dartmouth
----
* April 21-22: [[DBP:Andy_Saykin_visit_BWH_April_21_2005| Andy Saykin visit to Brigham and Women's Hospital and MIT]]
----
* March 25: University of Utah visit of Harvard VA for collaborative work on DTMRI.
* March 21-23: [[FBIRN:retreat2005|fBIRN Retreat in Irvine with User Tutorials for Slicer, Brains2 Wednesday on March 23]]
----
* February 20-22: [[AHM_2005:Main|'''The First All-Hands-Meeting and Programming Event in Salt Lake City, Utah''']]
* February 17-18: [[Dissemination:Workshop_Feb17-18_2005| Dissemination Workshop]], UCSD]]
----
* January 26: Slicer User Workshop at BWH: [http://www.slicer.org/slicerWiki/index.php/Slicer:User_Workshop_Jan26 Information for Atendees]
* January 24-25: Dissemination Workshop at [[Dissemination:Workshop_Jan24-25_Boston|Agenda]], [[Dissemination:Workshop_Jan2005_Interested_Attendee_List|List of Participants]], [[Talk:Dissemination:Workshop_Jan24-25_Boston_Feedback|Attendee Feedback]]
* January 17-18: [http://www.imaginggenetics.uci.edu First International Imaging Genetics Conference] at the Beckman Center of the National Academy of Sciences in Irvine, CA.

=== 2004 ===

* December 9-10: Dissemination Workshop in the Surgical Planning Laboratory, BWH: [[Dissemination:Workshop_Dec9-10_Boston|Agenda]], [[Dissemination:Workshop_Dec9-10_Boston_Presentations|Presentations]], [[Dissemination:Workshop_Dec9:10_Attendees_List|List of Participants]], [[Dissemination:Workshop_Dec9:10_Summary|Summary]], [[Talk:Dissemination:Workshop_Dec9-10_Boston_Feedback|Attendee Feedback]]
----
* November 16: Dissemination Meeting: [[Dissemination:Kickoff_Agenda|Agenda]], [[Dissemination:Kickoff_Summary|Summary]]
----
* October 15: [[Kickoff:Main| NA-MIC Kickoff Meeting]]

File:Spharm-pdm-icon.png

2017-04-19T19:18:37Z

Bpaniagua: Bpaniagua uploaded a new version of File:Spharm-pdm-icon.png

SPHARM-PDM extension icon

File:Spharm-pdm-icon.png

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Bpaniagua: Bpaniagua uploaded a new version of File:Spharm-pdm-icon.png

SPHARM-PDM extension icon

File:Spharm-pdm-snapshot.png

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Bpaniagua: Bpaniagua uploaded a new version of File:Spharm-pdm-snapshot.png

SPHARM-PDM snapshot

File:Spharm-gui1.png

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Bpaniagua: Snapshot for SPHARM-PDM extension April 2017

Snapshot for SPHARM-PDM extension April 2017

2017 IADR Workshop

2017-03-24T15:54:17Z

Bpaniagua: /* Workshop Agenda */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

[https://docs.google.com/a/umich.edu/viewer?a=v&pid=sites&srcid=dW1pY2guZWR1fGRlbnRpc3RyeS1pbWFnZS1jb21wdXRpbmd8Z3g6M2IyMDkyNmRmMGRhY2ZlYg About DCBIA].

==Date and Location==

==Workshop Agenda==

# 3568 - Image Analysis Overview - Lucia Cevidanes
# 3569 - Open Source Software Development - Beatriz Paniagua
# 3570 - TMJ Analysis - Marilia Yatabe
# 3571 - Quantification of Tooth Movement - Marilia Yatabe

Learning goals

# Demonstrate approaches to 3D imaging registration, display and measurements
# Illustrate in depth quick decision of patient treatment needs with 3D imaging.
# Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==
[https://sites.google.com/a/umich.edu/dentistry-image-computing/Download Slicer CMF]

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:53:08Z

Bpaniagua: /* Workshop Agenda */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

[https://docs.google.com/a/umich.edu/viewer?a=v&pid=sites&srcid=dW1pY2guZWR1fGRlbnRpc3RyeS1pbWFnZS1jb21wdXRpbmd8Z3g6M2IyMDkyNmRmMGRhY2ZlYg About DCBIA].

==Date and Location==

==Workshop Agenda==
# Demonstrate approaches to 3D imaging registration, display and measurements
# Illustrate in depth quick decision of patient treatment needs with 3D imaging.
# Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==
[https://sites.google.com/a/umich.edu/dentistry-image-computing/Download Slicer CMF]

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:51:17Z

Bpaniagua:

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

[https://docs.google.com/a/umich.edu/viewer?a=v&pid=sites&srcid=dW1pY2guZWR1fGRlbnRpc3RyeS1pbWFnZS1jb21wdXRpbmd8Z3g6M2IyMDkyNmRmMGRhY2ZlYg About DCBIA].

==Date and Location==

==Workshop Agenda==
1- Demonstrate approaches to 3D imaging registration, display and measurements
2- Illustrate in depth quick decision of patient treatment needs with 3D imaging.
3- Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==
[https://sites.google.com/a/umich.edu/dentistry-image-computing/Download Slicer CMF]

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:50:53Z

Bpaniagua: /* Software */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

[https://docs.google.com/a/umich.edu/viewer?a=v&pid=sites&srcid=dW1pY2guZWR1fGRlbnRpc3RyeS1pbWFnZS1jb21wdXRpbmd8Z3g6M2IyMDkyNmRmMGRhY2ZlYg About DCBIA].

==Date and Location==

==Workshop Agenda==
1- Demonstrate approaches to 3D imaging registration, display and measurements
2- Illustrate in depth quick decision of patient treatment needs with 3D imaging.
3- Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==
[https://sites.google.com/a/umich.edu/dentistry-image-computing/Download Slicer CMF]

==Data==

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:49:30Z

Bpaniagua: /* Introduction */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

[https://docs.google.com/a/umich.edu/viewer?a=v&pid=sites&srcid=dW1pY2guZWR1fGRlbnRpc3RyeS1pbWFnZS1jb21wdXRpbmd8Z3g6M2IyMDkyNmRmMGRhY2ZlYg About DCBIA].

==Date and Location==

==Workshop Agenda==
1- Demonstrate approaches to 3D imaging registration, display and measurements
2- Illustrate in depth quick decision of patient treatment needs with 3D imaging.
3- Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==

==Data==

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:44:00Z

Bpaniagua: /* Introduction */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

About DCBIA.

==Date and Location==

==Workshop Agenda==
1- Demonstrate approaches to 3D imaging registration, display and measurements
2- Illustrate in depth quick decision of patient treatment needs with 3D imaging.
3- Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==

==Data==

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:35:35Z

Bpaniagua: /* Workshop Agenda */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==
We will present novel quantitative tools based in 3D Shape Analysis to evaluate the Temporomandibular Joints and measure tooth movement. Working under the Dental and Craniofacial Bionetwork for Image Analysis, funded by NIDCR/NIBIB R01 DE024450, we have developed open-source software for diagnosis, treatment planning and assessment of outcomes of orthodontic, orthopedic and surgical treatments. The open source tools allow clinicians and researchers to measure bone and dental changes, after registration relative to anatomical structures of interest. This workshop will focus specifically on procedures for TMJ analysis and for measuring tooth movement. All participants will receive a USB drive for software installation and example files. Participants are required to bring their laptops to take full advantage of the hands-on workshop.

==Date and Location==

==Workshop Agenda==
1- Demonstrate approaches to 3D imaging registration, display and measurements
2- Illustrate in depth quick decision of patient treatment needs with 3D imaging.
3- Distinguish how 3D imaging has changed our treatment planning.

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==

==Data==

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:35:15Z

Bpaniagua: /* Introduction */

2017 IADR Workshop

2017-03-24T15:33:03Z

Bpaniagua: /* Presenters */

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==

==Date and Location==

==Workshop Agenda==

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

* '''Marilia Yatabe''' , ''Ph.D, DDS, University of Michigan''
msyatabe@yahoo.com.br

* '''Beatriz Paniagua''' , ''Ph.D, Kitware, Inc''
beatriz.paniagua@kitware.com

* '''Clement Mirabel''' , ''University of Michigan''
mirclem@umich.edu

* '''Priscille Dumast''' , ''University of Michigan''
prisgdd@umich.edu

==Software==

==Data==

==Other Resources==

==Participant List==

2017 IADR Workshop

2017-03-24T15:23:38Z

Bpaniagua: Created page with "{| class="wikitable" | style="width:25%" |Image:NAMIC.jpg | style="width:25%" |150px | style="width:25%" |Image:UNC_uni.jpg |} == Introduction ==..."

{| class="wikitable"
| style="width:25%" |[[Image:NAMIC.jpg]]
| style="width:25%" |[[Image:MU.jpg|150px]]
| style="width:25%" |[[Image:UNC_uni.jpg]]
|}

== Introduction ==

==Date and Location==

==Workshop Agenda==

==Presenters==

* '''Lucia Cevidanes''' , ''Ph.D, DDS, University of Michigan''
luciacev@umich.edu

==Software==

==Data==

==Other Resources==

==Participant List==

Events

2017-03-24T15:20:55Z

Bpaniagua: /* 2017 */

__TOC__
== Introduction ==
NA-MIC organizes a variety of events:
* Workshops address specific research focus areas.
* Training events aim at training NA-MIC participants and outsiders in NA-MIC technologies.
* Project weeks are intended for making progress in a variety of projects.

The majority of NA-MIC events are hands-on and open to collaborators and interested scientists.

== [[TCON:Main|Telephone Conferences]] ==
== Upcoming Events ==
===2017===
*'''June 26-30:''' [[2017_Summer_Project_Week|Summer Project Week]], Catanzaro Lido, Calabria, Italy
*'''March 25:''' [[2017_IADR_Workshop|DCBIA Craniofacial workshop]], 95th General Session & Exhibition of the IADR, San Francisco

== Standing Events ==
* [[TCON:Main|A list of all upcoming and past teleconferences]]
* [[Engineering:Programming_Events|Hands on Project Events]]
* [http://www.slicer.org/slicerWiki/index.php/Slicer:Developer_Meetings Slicer developer meetings]
* [[Event:Journal Club at BWH|Journal Club at BWH]]

== Past Events ==
===2017===
*March 14-15: [http://ncigt.org/igt9 9th NCIGT and NIH Image Guided Therapy Workshop], Bethesda, MD
*March 11-12: [[Hiroshima_2017|Seminar for Young Researchers]], Hiroshima, Japan
----
*February 1: [[2017_Universite_Catholique_Lille| 3D Slicer presentation]] Université Catholique de Lille, France
----
*January 12: [[2017_Tutorial_Contest| 2017 Tutorial Contest]], MIT
*January 10: [[BWH_Radiology_Residents_Workshop|BWH Radiology Residents Workshop]], Boston, MA
*January 9-13: [[2017_Winter_Project_Week|Winter Project Week]], MIT

===2016===
*November 27-December 2: [[RSNA_2016| 102nd Annual Meeting of the Radiological Society of North America, RSNA 2016]], Chicago, IL
*November 17: [[2016_BWH_Radiology_Resident_Education | 3D Slicer Hands-on workshop for Radiology Residents]]
----
*October 21: [http://interactivemedical.org/imic2016/ Interactive Medical Image Computing (IMIC) Workshop] Athens, Greece
*October 17-21: [http://miccai.org/ MICCAI 2016], Athens, Greece
*October 7-8: [[media:11thIMRI-Brochure-final.pdf | 11th Interventional MRI Symposium]], Baltimore, MD
**[http://www.hopkinscme.edu/CourseDetail.aspx/80038447 Registration]
**[https://easychair.org/conferences/?conf=imri2016 Abstract Submission]
----
*September 15: [[2016_BWH_Resident_Education | 3D Slicer seminar for BWH Radiology Residents]], Brigham and Women's Hospital, Boston, MA
----
*August 31: [[2016_Beth_Israel_Training_Workshop | 3D Slicer Hands-on Training Workshop]], Beth Israel Deaconess Medical Center, Boston, MA
----
*June 20-25: [[2016_Summer_Project_Week| '''Summer Project Week''']], Heidelberg, Germany
*June 8: [[2016_Beth_Israel_Psychiatry_Seminar | 3D Slicer Seminar, Beth Israel Deaconess Medical Center]], Boston, MA
----
* May 23-27: [https://docs.google.com/document/d/1BIQHLheqYhsfeHhCTVtid5bZMVywlo1UmeK6-ZmHeq8/edit Medical Image Webapp Software Hackfest], Boston, MA
----
*April 27: Andrey Fedorov invited presentation at the [https://cancer.stonybrookmedicine.edu/2016_ResearchSymposium 2016 Gloria and Mark Snyder Symposium for Cancer Medicine], Stony Brook, NY ([https://dx.doi.org/10.6084/m9.figshare.3205939.v1 | slides])
*April 15: [[Mount_Sinai_Hospital_Workshop | 3D Slicer Workshop]], Mount Sinai Hospital, NYC, NY
*April 14: [[StonyBrook_Workshop | 3D Slicer Workshop]], Stony Brook University, Stony Brook, NY
*April 8-9: [[SPL25| SPL 25th Anniversary Celebration]], Harvard Medical School, Boston, MA
*April 5: Greg Sharp lecture ''3D Slicer for Radiotherapy Research'' at [http://dsmf-symposium.dk/program.html Danish Society for Medical Physics Symposium], Copenhagen, Denmark
----
*March 15-16: [http://ncigt.org/8th-ncigt-and-nih-image-guided-therapy-workshop 8th NCIGT and NIH Image Guided Therapy Workshop], Bethesda, MD
*March 13: Ron Kikinis invited presentation at [http://www.ci4cc.org/events/spring2016 Cancer Informatics for Cancer Centers (CI4CC) Spring 2016 Symposium and workshop], Napa, CA (workshop materials: http://qiicr.org/CI4CC-Spring2016-ASW)
----
*February 11: [[FAID_2016|ICM-MIT-Harvard workshop, French American Innovation Day]], MIT
----
*January 26: [http://iactalks.iac.es/talks/view/865 Ron Kikinis' invited presentation at Instituto de Astrofísica de Canarias - IAC, "Tsunami in the Procedure Room, the Growing Challenge of Managing Data in Image Guided Interventions and Surgery"]
*January 14: [[CHB|3D Slicer Workshop at Children's Hospital]], Boston, MA
*January 7: [[Events:TutorialContestJanuary2016 |2016 Tutorial Contest]], MIT
*January 4-8: [[2016_Winter_Project_Week|'''Winter Project Week''']], MIT

===2015===
*December 14-18: [[Montevideo_Uruguay_2015| 3D Slicer and SlicerIGT at Universidad de la República]], Montevideo, Uruguay
----
*November 29-December 4: [[RSNA_2015| 101th Annual Meeting of the Radiological Society of North America, RSNA 2015]], Chicago, IL
*November 26-28: [[SlicerCMFWorkshop_Italy2015 | Cranio Maxillo Facial imaging workshop using SlicerCMF]], Italy
*November 23: [[HST.583_2015_Brain_Mapping_for_Neurosurgery | Harvard-MIT Division of Health Science and Technology HST.583 Lab - Brain Mapping for Neurosurgery]]
*November 19: [[Brown_2015| 3D Slicer Workshop at Brown University]], Providence, RI
*November 16: [[MGH_2015 | 3D Slicer Tutorial]], MGH, Boston, MA
----
*October 19-21: [http://www.ci4cc.org/events/fall2015 Fall 2015 CI4CC Symposium and Workshop]: [https://goo.gl/MDq0u8 Quantitative Image Informatics for Cancer Research (QIICR) presentation by Andrey Fedorov], San Diego, CA
*October 9: [http://interactivemedical.org/imic2015/ MICCAI 2015 - Interactive MIC 2nd edition], Munich, Germany
*October 5: [http://projects.iq.harvard.edu/dtichallenge15/home MICCAI 2015 DTI Challenge Workshop - 5th edition], Munich, Germany
----
*September 14: [[HST.583_2015 | Harvard-MIT Division of Science Health and Technology HST.583 Lab- The Life Cycle of Medical Imaging Data]]
*September 1: [[Events:2015_Ron_visit|SPL Introduction and Slicer Workshop]], Szeged, Hungary
----
*August 29: Ron Kikinis Keynote Lecture "[[media:2015-09-06-Tsunami.pptx |Tsunami in the Procedure Room]]: The Growing Challenge of Managing Data in Image-Guided Interventions and Surgery" at the [http://www.iccas.de/symposium/ ICCAS International Symposium on Computer-Assisted Surgery], Leipzig, Germany (the download is about 49MB)
*August 24-25: [[Brno_visit_2015| dMRI Collaboration with CEITEC]], Brno, Czech Republic
*August 17: Ron Kikinis presented the state of 3D Slicer to BISTI, Natcher Building, NIH, Bethesda, MD ([[media:2015-11-11-Slicer-Status.pptx|download here, ~79MB]]).
*August 7-8: Steve Pieper presented 3D Slicer at [http://www.mbl.edu/imaging/escaping-flatland-workshop-2015/| Escaping Flatland: Imaging biological architecture and events in 3 dimensions], Woods Hole Marine Biology Laboratory. [http://videocenter.mbl.edu/videos/video/1123/ Video of the event] is available. Note that two feeds are available and the user can toggle between the live video and the screen.
*August 6: [[Slicer_WS_Morioka_2015| Slicer Workshop]], Morioka, Iwate, Japan
----
*July 15: [http://aapm.org/meetings/2015AM/PRAbs.asp?mid=99&aid=27746 American Association for Medical Physics: Open Libraries for Research], Anaheim, CA
----
*June 21-24: [[2015_Summer_Project_Week|'''Summer Project Week''']], Barcelona, Spain
*June 11: [[UNC_2015 | 3D Slicer Training Workshop for NeuroImaging]], University of North Carolina at Chapel Hill, NC
*June 8: [[BU_2015 | 3D Slicer Training Workshop for Radiologists]], Boston University School of Medicine, Boston, MA
*June 7: [[Autoseg_2015 | Automatic Segmentation Algorithm Workshop]], Toronto, Canada
*June 7: [[IUPESM_2015| Slicer RT Tutorial, World Congress on Medical Physics and Biomedical Engineering]], Toronto, Canada
----
*May 27: [http://qiicr.org QIICR] presentation and 3D Slicer demo at the annual meeting of the NCI [http://itcr.nci.nih.gov/ Informatics Technology for Cancer Research (ITCR)] project, UCSD, San Diego, CA
----
*April 13-14: demonstration of 3D Slicer at the annual face-to-face meeting of the NCI Quantitative Imaging Network, Rockville, MD
----
*March 30-31: 3D Slicer invited demonstrations at [http://www.ci4cc.org/events/spring2015 Cancer Informatics for Cancer Centers (CI4CC) Spring 2015 Symposium & Genomics Workshop], Bethesda, MD
*March 26: [[Shiga_2015_Workshop | 3D Slicer Workshop]], Shiga, Japan
*March 25-26: [[Shanghai_2015 | 3D Slicer Invited Workshop]], Shanghai, China
*March 24: [[Hangzhou_2015 | 3D Slicer Invited Workshop]], Hangzhou, China
*March 11: [[Construction and Superimposition of 3D Surface Models IADR 2015]], Boston, MA
----
*February 27-28: [[2015_TWMU_Seminar| Medical Device Seminar]], Tokyo Women's Medical University, Tokyo, Japan
*February 19: [[Stanford 2015|3D Slicer invited tutorial]], Stanford University
----
*January 22: [http://acoustic.univ-rennes1.fr/doku.php/mdbs2015 Deep Brain Stimulation Workshop], Rennes, France
*January 5-9: [[2015_Winter_Project_Week| '''Winter Project Week''']], Salt Lake City, UT

===2014===
*December 16-17: [[Moffitt_2014|3D Slicer Invited workshop]], Moffitt Cancer Center, Tampa, FL
----
*November 30-December 5: [[RSNA_2014| 100th Annual Meeting of the Radiological Society of North America, RSNA 2014]], Chicago, IL
*November 18-19: [[Iowa2014| 3D Slicer Workshop]], Iowa City, IA
*November 20: [[CMF_Workshop_Cleveland_2014| 3D Cranio Maxillo Facial workshop]], CWRU, Cleveland, OH
----
*October 27: [[Prof_Sugiyama_and_Dr_Oyama_visit | Prof. Sugiyama and Dr. Oyama visit at BWH]]
*October 18-22: [http://w3.cns.org/meetings/2014/ Annual Meeting of the Congress of Neurological Surgeons], Boston, MA
*October 10-11: [http://radiologie.uniklinikum-leipzig.de/radiologie.site,postext,imri,a_id,700.html 10th Interventional MRI Symposium], Leipzig, Germany
*October 4: [[Pretoria2014| 3D Slicer Workshop]] at the [http://www.pah.org.za/ Steve Biko Academic Hosptial] in Pretoria, South Africa
----
*September 18-19: 7th NCIGT and NIH Image Guided Therapy Workshop, Cambridge, MA
*September 18: [http://www.slicerigt.org/wp/miccai-2014-tutorial/ Building image-guidance systems from open-source components] tutorial at MICCAI'14, Cambridge, MA
*September 15: [[DBS_Meeting_2014 | Deep Brain Stimulation Meeting, MICCAI 2014]], Boston, MA
*September 14: [[DTI_Challenge_2014| DTI Tractography Challenge, MICCAI 2014]], Boston, MA
*September 14: [http://interactivemedical.org/imic2014/index.html IMIC 2014 at MICCAI 2014], Boston, MA
----
*August 26-30: [http://www.slicerigt.org/wp/embc-2014-tutorial/ EMBC'14 Tutorial: Building image-guidance systems from open-source components], Chicago, IL
*August 5: [[AAPM 2014 | 3D Slicer User Group at AAPM 2014]], Austin, TX
----
*July 1: [[2014_Neurotrauma_Symposium| 32nd Annual Neurotrauma Symposium: S08 Breakout Session on Advances in Multimodal Imaging of TBI]] organized by John van Horn with scientific presentations by Guido Gerig and Andrei Irimia (all NA-MIC), San Francisco, CA
----
*June 26: [http://www.na-mic.org/Wiki/index.php/2014_Tutorial_Contest Slicer Tutorial Contest, MIT, Cambridge, MA ]
*June 23-27: [[2014_Summer_Project_Week| '''Summer Project Week at MIT''']]
----
*April 15:[[Brown_University_Workshop | 3D Slicer workshop]], Brown University, Providence, RI
----
*March 28: [http://slicer.kitware.com/midas3/download/item/133719/2014-QIN_F2F-Fedorov-QIICR_Slicer.pdf Slicer/QIICR presentation] Annual Face to face meeting of the Quantitative Imaging Network, NCI, Rockville, MD
*March 19: [[CEA_2014| Follow-up meeting on the use of Slicer]] Prof. Dhenain's team, CEA Paris, France
*March 10-14: [[Pichl_2014| Winter School for Medical Physics]], Pichl-Schladming, Austria
*March 6-10: [[ECR_2014| European Congress of Radiology]], Vienna, Austria
----
*February 18-20: [[Second_Medical_Image_Registration_Retreat,_Puerto_Rico| Second Medical Image Registration Retreat]], San Juan, Puerto Rico
*February 16: [[SPIE_2014 | Grand Challenges Panel]], SPIE 2014, San Diego, CA
*February 14: [http://www.na-mic.org/Wiki/index.php/USC_2014 Slicer Training workshop], Los Angeles, CA
----
*January 27-29: [http://www.na-mic.org/Wiki/index.php/TWMU_Visit_2014 Visit by Tokyo Women's Medical University and Japan National Cancer Center], SNR Lab, BWH, Boston, MA
*January 7: [http://wiki.na-mic.org/Wiki/index.php/2014_SLC_Training_Workshop 3D Slicer Training workshop], Salt Lake City, UT
*January 6-10: [[AHM_2014| '''AHM, EAB''']], [[2014_Winter_Project_Week|'''Winter Project Week''']], Salt Lake City, UT
*January 4: [http://www.sci.utah.edu/cibcwksp2014.html Software Tools for Image Based Modeling, Simulation, and Visualization], Workshop, Salt Lake City, UT

===2013===
*December 17: [http://wiki.na-mic.org/Wiki/index.php/CEA_2013 MIRCEN/CEA Slicer event], Paris, France
*December 1-6: [[RSNA_2013| RSNA 2013]], Chicago, IL
----
*November 20: [[CMF_Workshop_Cleveland_2013| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH
----
*October 27-30:[[TWMU_Visit_2013| Visit by Tokyo Women's Medical University Visit]], SNR Lab, BWH
*October 22-23:[[QIICR_2013| QIICR brainstorming and kickoff meeting]], 1249 Boylston St., Boston
*October 17: [[Brno_2013| 3D Slicer Workshop]], Brno, Czech Republic
----
*September 30: [[Changchun_2013| 3D Slicer invited seminar]], Changchun, China
*September 29: [[Beijing_2013| 3D Slicer invited workshop, PLA Hospital]], Beijing, China
*September 26: [http://www.dkfz.de/en/mbi/ctk-miccai2013/index.html MICCAI 2013 CTK Tutorial], Nagoya, Japan
*September 22: [[MICCAI2013| MICCAI 2013 DTI Tractography Challenge on Peritumoral White Matter Anatomy for Neurosurgical Decision-Making]], Nagoya, Japan
*September 11: [[WFNS2013| Sonia Pujol's invited lectures, 15th WFNS World Congress of Neurosurgery]], Seoul, Korea
----
*August 5: [[AAPM 2013 | 3D Slicer User Group, AAPM 2013]], Indanapolis, IN
*August 1-2: [[BRAINS_CAMP| BRAINSCamp workshop]], Iowa City, IA
----
*July 19: [[Dr.Dhenain's visit to the SPL, Boston, MA |Dr. Dhenain's visit to the SPL]], Boston, MA
----
*June 26-29: [[CARS2013| 3D Slicer hands-on workshop on Image-Guided Therapy and joint Slicer/CTK/MITK workshop]], CARS 2013, Heidelberg, Germany
*June 26: [http://tbi.ci.uchicago.edu/diffusion-mri-tbi-workshop Diffusion MRI in Traumatic Brain Injury 2013; Workshop on Diffusion MRI in Traumatic Brain Injury: Software Tools and International Shared Data Repository], Heidelberg, Germany
*June 17-21: [[2013_Summer_Project_Week|'''Summer Project Week at MIT]]''', [[2013_Tutorial_Contest|Summer 2013 Tutorial Contest]]
*June 14: [[UAEM_Visit|Prof. Avila-Vilchis and Prof. Vilchis-Gonzales visiting the SPL]], Boston, MA
*June 14: [[BWH_2013| 3D Slicer Hands-on Workshop]], Surgical Planning Lab, 1249 Boylston St., Boston, MA
----
*May 31: [[AAPM_New_England_Chapter_Summer_Meeting| Invited Lecture, AAPM Chapter New England Summer Meeting]], Portsmouth, NH
*May 24: [[Kitware_Course| 3D Slicer: Visualize and Analyze your datasets, Kitware Training Course,]] Lyon, France
*May 20-24: [http://www.commontk.org/index.php/CTK-Hackfest-May-2013 CTK Hackfest], Kingston, Ontario, Canada
*May 11: [http://www.youtube.com/watch?v=9t1V-Ro0Cak SlicerIGT hands-on demo], Science Rendezvous, Kingston, Ontario, Canada
----
*April 22: [[2013_ISMRM_CardiacStudyGroup_CARMA|ISMRM 2013 Cardiac Study Group Tutorial]]: Slicer for segmentation and enhancement quantification in cardiac LGE-MRI. Salt Lake City, UT
*April 15: [[2013_Juntendo_University| DTI Challenge Presentation, Jutendo University, Tokyo, Japan]]
*April 10-11: [http://www.na-mic.org/Wiki/index.php/Iwate_2013_Training Slicer Ultrasound Workshop], Iwate, Japan
*April 9: [http://www.na-mic.org/Wiki/index.php/Tokyo_2013_Training Slicer Workshop], Tokyo, Japan
*April 8: [[Imaging_in_Neuroscience| Imaging in Neuroscience Course]], Boston
----
*March 21-23: [http://www.ncigt.org/pages/IGT_Workshop_2013 6th NCIGT and NIH Image Guided Therapy Workshop] in Crystal City, VA
*March 11: [[CIR_visit_Vienna_Medical_Center | Slicer Lecture]], Computational Image Analysis and Radiology Laboratory, Medical University, Vienna, Austria
*March 11: [[SlicerRT_workshop | SlicerRT workshop]], Medical University, Vienna, Austria
*March 8: [http://www.na-mic.org/Wiki/index.php/Autoseg_2013 Automatic Segmentation Algorithm Workshop], Boston, MA
*March 7-11: [http://www.na-mic.org/Wiki/index.php/ECR_2013 European Congress of Radiology], Vienna, Austria
*March 4-5: 3D Slicer is presented at the annual face-to-face meeting of the [http://imaging.cancer.gov/programsandresources/specializedinitiatives/qin NCI Quantitative Imaging Network ] ([[Media:3DSlicer-NCI-QIN-F2F-March2013_poster_Fedorov.ppt|poster]] and [[Media:3DSlicer-NCI-QIN-F2F-March2013_tool_sharing_slides_Fedorov.ppt|slides]])
*March 4: [[2013-03-4- TWMU_Visit| Delegates from Research Administration Office, Tokyo Women's Medical University visits SNR Lab/NCIGT and AMIGO]]
----
*February 28-March 5: [[2013_Dr_Chen_Visit | Visit of Dr. Xiaolei Chen, PLA General Hospital, Beijing]], SPL
*February 22: [[2013-02-22 Dr. Takahashi's Visit to SNR Lab/NCIGT and AMIGO|Dr. Takahashi's Visit to SNR Lab/NCIGT and AMIGO]]
*February 14: [[2013-02-14-Slicer_Demo_at_Memorial_Sloan_Kettering_Cancer_Center | Demo of the Slicer segmentation and registration tools]], Memorial Sloan Kettering Cancer Center
*February 14: [[2013-02-14-Korean_Surgical_Robot_Research_Team_Visit | Surgical Navigation and Robotics Laboratory hosts a robotic surgery research group from Korea]]
*February 9-14: [http://www.na-mic.org/Wiki/index.php/SPIE_2013_DTI_Workshop SPIE 2013 Diffusion Tensor Imaging Course], Orlando, FL
*February 7: [[2013-02-07-MGH_Slicer_user_meeting | Slicer user/developer meeting with the MGH user group]]
----
*January 31: [[GolbyLabMeeting_DTIChallenge | MICCAI DTI Challenge Presentation]], Golby Lab Meeting, Brigham and Women's Hospital, Boston, MA
*January 28: [http://www.assembla.com/wiki/show/slicerrt/20130128_slicer_matlab_personal_cloud_meeting Slicer Matlab personal cloud meeting]
*January 7-11: [[AHM_2013|'''AHM, EAB, Winter Project Week in Salt Lake City]]'''

===2012===
*December 10: [[ PNL_2012 | PNL Slicer4 Training Workshop]]
*December 3: [[HST_2012 | Harvard-MIT Division of Health Science and Technology - Diffusion Tensor Imaging Course]]
----
*November 25-30: [[RSNA_2012 | 98th Annual Meeting of the Radiological Society of North America (RSNA 2012)]], Chicago, IL
*November 14: [[CMF_Workshop_Cleveland_2012| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH
*November 8-9: [http://meetings.nigms.nih.gov/index.cfm?event=general&ID=15208 NCBC showcase event in Washington DC]: [[media:NA-MIC-Overview-2012-11.pdf|PDF of the overview slides]]
----
* October 8: [[Niguarda_Ospedale_Visit| Invited visit to the Epilepsy and Parkinson Surgery Centre "Claudio Munari" Ospedale Niguarda "Ca' Granda"]], Milan, Italy
* October 1: [[DTI_Tractography_Challenge_MICCAI_2012| DTI Tractography Challenge, MICCAI 2012, Nice, France]]
* October 1: [http://www.sci.utah.edu/stia2012-home.html 2nd International MICCAI Workshop on Spatiotemporal Image Analysis for Longitudinal and Time-Series Image Data (STIA'12]), MICCAI 2012, Nice, France
----
* September 25-26: [[Pieper-MeVis-2012-09| Steve Pieper visited MeVis]]
* September 21: [http://www.ncigt.org/pages/IGT_Workshop_2012 5th NCIGT and NIH Image Guided Therapy Workshop], Boston, MA
* September 20: [[DrShekhar_Visit_Sep_2012|Dr. Raj Shekhar's visit to NCIGT]]
* September 12: [[Universidad Autonoma del Estado de Mexico Symposium | 3DSlicer invited lecture]], First Symposium on Medical Bioengineering, Universidad Autónoma del Estado de México, Mexico City, Mexico
* September 10:''' [[HST_583_2012| Harvard-MIT Division of Science Health and Technology HST.583 - Neuroimage Analysis Lab]]
----
* August 29: [[BU_Slicer4_Training_Session| BU Slicer4 Training session]]
* August 20-21: [[Core 1 Retreat 2012|Core 1 Retreat 2012]] Park City, UT
* August 20: [[Slicer4.2Planning|Slicer 4.2 Planning meeting]]
----
* July 30: [[AAPM_2012 | 3D Slicer User Group]] AAPM, Charlotte, NC
* July 9-13: [http://www.commontk.org/index.php/CTK-Hackfest-Jul-2012 CTK Hackfest], Boston, MA
----
* June 30: [[CARS_2012 | NA-MIC IGT Workshop, CARS 2012]]
* June 18-22: [[2012_Summer_Project_Week|'''Summer Project Week at MIT''']]; [[2012_Tutorial_Contest| Summer 2012 Tutorial Contest]]
----
* May 21-22: [[Madrid-May-21-2012-Slicer-Workshop| Slicer workshop]] Madrid, Spain
* May 16: [http://www.ias.uwa.edu.au/lectures/kikinis| Public lecture, UWA], Perth, Australia
* May 14: [http://www.ias.uwa.edu.au/masterclass/kikinis Masterclass, UWA], Perth, Australia
* May 2: [http://www.hisa.org.au/events/event_details.asp?id=224112 Slicer workshop], St. Vincent's Hospital, Fitzroy, Melbourne, Australia
----
* April 30-May 1: [http://www.cs.ucl.ac.uk/opensource_mia_ws_2012/ Slicer presentation], International Symposium on Biomedical Imaging (ISBI 2012)], Barcelona, Spain
* April 26: [http://www.hisa.org.au/events/event_details.asp?id=224111 Slicer workshop], St. Vincent's Hospital, Sydney, Australia
* April 5: [[NEU-Medical-Physics-Seminar| Northeastern University Medical Physics Seminar, Gregory Sharp, Nobuhiko Hata]]
----
* March 20-21: [[Iowa-March-20-2012-Slicer-Workshop| Slicer workshop in Iowa]]
* March 16: [[Particle_UNC_Utah| Particle training seminar, UNC]] Chapel Hill, NC
* March 5-6: Slicer booth presentation at the annual [https://wiki.nci.nih.gov/display/CIP/QIN Quantitative Imaging Network] face-to-face meeting; NCI, Washington DC
----
* February 29: [[Chapel-Hill-February-29-2012-Slicer-Talk| Slicer talk]], UNC
* February 27: [[Slicer-4.1| Plans for Slicer 4.1]]
* February 14: [[TWMU_Medtronics_OpenIGTLink| TWMU Open IGT Link - Stealth station Project, Kick-off]], Tokyo, Japan
* February 5: [[SPIE_2012_DTI_Workshop| SPIE 2012 DTI Course]], San Diego, CA
----
* January 9-13: [[AHM_2012|'''AHM, EAB'']], [[2012_Winter_Project_Week|'''Winter Project Week in Salt Lake City''']]

=== 2011 ===
*November 27-December 2: [[RSNA_2011 | 97th Annual Meeting of the Radiological Society of North America (RSNA 2011)]], Chicago, IL
*November 14-18: [http://www.commontk.org/index.php/CTK-Hackfest-Nov-2011 CTK Hackfest], Sophia Antipolis, France
*November 11: [[SFN2011 Diffusion_Tensor_Imaging_Analysis Workshop |White Matter Exploration with Diffusion Tensor Imaging: Fundamentals and Perspectives - SFN 2011 Workshop]], Washington DC
*November 9: [[CMF_Workshop_Cleveland| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH
*November 3: [[2011_Slicer4-PreRSNAHackFest|Slicer4 PreRSNA Hackfest, Google hangouts]]
*November 2: [[BWH_Resident_Fair| 3DSlicer exhibit]], BWH Resident Fair, Boston, MA
----
*October 20: [[2011_Slicer4-Documentation-Sprint|Slicer4 Documentation Sprint]]
*October 14-15: [[2011_Algorithms_Retreat|Algorithm Core Retreat in New England]]
*October 12-13: [http://www.ncigt.org/pages/IGT_Workshop_2011 NCIGT Workshop], Washington DC
----
*September 28: [http://wiki.na-mic.org/Wiki/index.php/Event:Journal_Club_at_BWH Journal Club talk: Seyed-Ahmad Ahmadi]
*September 26-28: [[Events:2011_Hungary_Slicer_Training|Programming and End-User Training]] Szeged, Hungary
*September 18: [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge_MICCAI_2011 DTI Tractography for Neurosurgical Planning: A Grand Challenge - MICCAI 2011 Workshop], Toronto, Canada'''
----
*August 4: [[Events:UBC_3D_Slicer_workshop_August_2011|UBC 3D Slicer workshop August 2011]]
*August 2: [[Events:2011-08-02-AAPM-Slicer-Users-Group-Meeting|3D Slicer users group meeting]], AAPM annual meeting, Vancouver, BC, Canada]]
----
*July 19-21: [[Events:Slicer4-Review-07-2011 | Slicer 4 Review and Programming Sprint]], 1249 Boylston St., Boston, MA
----
*June 26-30: [[Events:3DSlicer_Booth_OHBM_2011 | 3DSlicer Booth, OHBM 2011]], Quebec City, Canada
*June 20-24: [[2011_Summer_Project_Week|'''Summer Project Week at MIT''']]
*June 15: [[Events:2011-06-15-Robarts-Slicer-Workshop|Slicer Workshop]], Biomedical Imaging Research Centre, University of Western Ontario, Canada
*June 13: [http://www.na-mic.org/Wiki/index.php/Summer_2011_Tutorial_Contest Summer 2011 Tutorial Contest] Submission dead-line.
*June 7: [[Events:2011-06-07-UCSF-Diffusion-Imaging-Workshop|UCSF Diffusion Imaging Workshop]], San Francisco
----
*May 5: [[Events:Computational_Methods_for_Radiation_Oncology|Computational Methods for Radiation Oncology]], Boston, MA
----
*April 27: [[Events:Slicer-Hands-On-Hiroshima-2011|Slicer and OpenIGTLink Hands-on Training]], Hiroshima, Japan
*April 22: [[Event:2011-04-UtahDBP-Training|Slicer Hands-on Training For The Utah Afib Team]]
*April 12: [[Event:2011-04-DiMaioTalk|Talk by Simon DiMaio "da Vinci and Beyond"]]
*April 5: [http://www.na-mic.org/Wiki/index.php/Events:_Johns_Hopkins_University_Seminar_April_2011 Training Workshop], Johns Hopkins University, Baltimore, MD
----
*March 16-18: [http://vizbi.org VIZBI 2011] in Cambridge, MA includes NAMIC-affiliated speakers and VTK tutorials.
*March 15-16: [http://catalyst.harvard.edu/services/ittm/module1.html Harvard Catalyst Biomarkers and Imaging in Drug Development course] includes [[media:Pieper-Image Processing Strategies.pptx|a presentation on image processing approaches]] including NA-MIC and 3D Slicer.
*March 11: [[CTSC:Slicer_handson.021810| 3D Slicer Quantitative Medical Image Data Visualization Hands-On Workshop, Countway Room 403, (12-1pm)]]
*March 4: New [http://www.slicer.org/slicerWiki/index.php/Slicer3:3.6_Final_Issues#DONE:_Issues_fixed_for_inclusion_in_Slicer_3.6.3_--_included_in_release_builds_of_March_4.2C_2011 Slicer3.6.3 Patch Release]
----
*February 19-23: [[Event:2011_Registration_Retreat|Registration Retreat]]
*February 18: [[CTSC:Slicer_handson.021810| 3D Slicer Quantitative Medical Image Data Visualization Hands-On Workshop]], Harvard Countway Library room 403, (12-1pm)
*February 7-11: [http://www.commontk.org/index.php/CTK-Hackfest-Feb-2011 CTK Hackfest], Chapel Hill, NC
*February 4: [[Media:Fedorov-MGH-4Feb2011.pdf|Presentation of 3D Slicer for the MGH tumor measurement group]]
----
*January 10-14: '''[[AHM_2011|AHM, EAB]]''', [[2011_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

=== 2010 ===
*December 8: [[Events:Manchester-Dec-2010|Slicer workshop]], Manchester, UK
*December 6-7: [[Events:Dundee-Dec-2010|Slicer workshop]], Dundee, UK
----
*November 28-December 3: RSNA 2010, The 96th Annual Meeting of the Radiological Society of North America, Chicago IL
**November 29: 2:30 pm-4:00 pm: [[Events:RSNA_2010| 3D Interactive Visualization of DICOM images with Slicer]], Chicago IL
**November 30: 10:30 am-12:00 pm: [[Events:RSNA_2010_CTSA| Quantitative Medical Imaging for Clinical Research and Practice]], Chicago IL
**December 2: 10:30 am-12:00 pm: [[Events:RSNA_2010_didactic| Lifecycle of an imaging biomarker: from validation to dissemination]], Chicago IL
* November 17-18: [[EngineeringRetreat2010|Engineering Core retreat]]
* November 12: [[MGH-NA-MIC-2010-Kickoff|MGH Kick-off meeting with Algorithms and Engineering]]
* November 8-9: [[2010-WestCoastMaster|West Coast Events]]
* November 5-6: [[AlgorithmRetreat2010|Algorithm Core retreat]]
* November 4-6: [[WidgetDesign2010|Widget Design Fiesta]], Kitware, South Carborro, NC
* November 4-5: [[media:HataJJTalkNov2010.pdf |Robotics Presentation by Noby Hata]], Advances in Surgical Technologies Symposium, Celebration, FL
----
* October 25-26: [[Iowa-NA-MIC-2010-Kickoff| Iowa NA-MIC Kickoff meeting (UNC Core 1 visit)]]
* October 18:[[HST_583_2010_DTI_Course| Harvard MIT Division of Health Sciences and Technology - Diffusion Tensor Imaging Lab]]
----
* September 24: [http://lcib.rutgers.edu/miccai2010/ Prostate Cancer Imaging Workshop] MICCAI 2010, Beijing, China
* September 23: [http://www.grand-challenge.org/index.php/MICCAI_2010_Workshop Workshop on Medical Image Analysis for the Clinic - A Grand Challenge]
* September 23: [[Beijing_2010_NA-MIC_Workshop|Slicer Tutorial]], Chinese PLA General Hospital in Beijing, China
* September 20: [[MICCAI_2010| NA-MIC Tutorial]], MICCAI 2010, Beijing, China
* September 13: [[HST_583_2010| Harvard MIT Division of Health Sciences and Technology - Neuroimage Analysis Lab]]
----
* August 12-13: [[QtAugust2010| Review of Qt port]]
* August 11: [[2010-Slicer-UNCDuke|Slicer training event]], UNC and Duke
* August 10: [[2010-Sato-talk|Research retreat of SNR Laboratory, followed by Dr. Yoshinobu Sato's talk]]
* August 5: [http://www.termine-meduniwien.at/mediafiles/38/Vortragsankuendigung_Prof_Ron_KIKINIS_05082010.pdf?sid=4f2a2b592fc7004cea39a34993b1d72d Presentation], AKH, Vienna, Austria
----
* July 1: [[2010-Slicer-StLouis|Slicer training event in St. Louis]]
----
* June 26: [[2010_CARS| NA-MIC Tutorial]], Computer Assisted Radiology and Surgery Conference in Geneva, Switzerland
* June 22" [http://www.na-mic.org/Wiki/index.php/Summer_2010_Tutorial_Contest Slicer Tutorial Contest, MIT, Cambridge, MA]
* June 21-25: '''[[2010_Summer_Project_Week|Summer Project Week at MIT]]'''
* June 18: [[2010_CCA_Retreat|Clinical Computational Anatomy one day retreat]], Boston, MA
----
* May 20-23:[[cscbce_2010 | 5th Canadian Student Conference
on Biomedical Computing and Engineering]]
* May 17-21: [http://www.commontk.org/index.php/CTK-Hackfest-May-2010 CTK Hackfest], Georgetown University
* May 12: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Registration Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA
----
* April 29: [[2010_Slicer36_Module_Cull|Review of modules to keep and cull for the 3.6 release]]
* April 28: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Visualization Hands-On Workshop]], Countway Library, Harvard Medical School, Boston, MA
* April 9-10: [[2010_University.of.Iowa| NA-MIC Training Workshop]], University of Iowa
* April 7: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Registration Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA
----
* March 24: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Visualization Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA
* March 19: [[U-Tokyo-visit-03192010| NCIGT Workshop with delegates from University of Tokyo]], Brigham and Women's Hospital, Boston, MA
* March 16: [[Events:Slicer-Hands-On-Tokyo-2010| Image Guided Therapy research using 3D Slicer - Hands-On Workshop]], Tokyo Women's Medical University, Tokyo, Japan (page in Japanese)
* March 10: [http://summit2010.amia.org/session-details NA-MIC Presentation], AMIA 2010
* March 9: Registration Clinic at [http://www.ncigt.org/pages/IGT_Workshop_2010 IGT Workshop], Arlington, VA
* March 7-10: Several NA-MIC personnel are participating in [[Events:CTK-Pre-Hackfest-2010|The CTK Pre-Hackfest]], Heidelberg, Germany. This meeting is a kick off that is expected to lead to active working meetings similar to the NA-MIC Project Week activities. The meeting is organized by the [http://commontk.org CTK] group.
* March 3: Steve Pieper presents on "Visualizing Anatomy and Function from MRI Data", [http://vizbi.org/2010/ the 2010 EMBO Workshop on Visualizing Biological Data]. NA-MIC Wiki page with [[VIZBI2010|Supplemental information from the VIZBI Conference]]. [http://www.nature.com/nmeth/journal/v7/n3s/index.html A special edition of Nature Methods] contains papers by the presenters.
----
* February 24: [[CTSC:Slicer_handson.022410| 3D Slicer Medical Image Data Visualization Hands-On Workshop]], Countway Library, Harvard Medical School, Boston, MA
* February 14: [[Events:CTK-Workshop-SanDiego-2010| 4th CTK workshop]], SPIE, San Diego, CA
* February 9: [[Hata_BBN_visit|Hata BBN lecture]]
----
* January 4-8: '''[[AHM_2010|AHM, EAB'''], [[2010_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

===2009===
* December 16-17: [[Dec-2009-SlicerAIMBrainstorming|Slicer Annotation and Markup Brainstorming]]
* December 15: [[Dec-2009-SlicerXND-DesignAndEngineering | Slicer/XND Preliminary Design & Engineering Planning Session]], WUSTL]]
* December 1: [[Events:RSNA_CTSA_2009| CTSA]], RSNA, Chicago, IL
----
* November 30: [[Events:RSNA_2009| 3-D Interactive Visualization of DICOM images with Slicer - RSNA 2009]], 95th Annual Meeting of the Radiological Society of North America, Chicago, IL
* November 29: [[Events:CTK-Workshop-Chicago-2009| 3rd CTK workshop]], RSNA, Chicago, IL
* November 23: [[CTSC:Slicer_handson.112309| 3D Slicer Medical Image Data Visualization Hands-On Workshop]], , Countway Library, Harvard Medical School, Boston, MA
----
* October 16: [[SFN2009 Slicer DTI Workshop | Mapping the Brain with Diffusion Tensor Imaging - A Hands-On Workshop]] [http://www.sfn.org/am2009/ Annual Meeting of the Society of Neuroscience], Chicago, IL
* October 9: [[Events:VT-NAMIC-NCBC-Collaboration-meeting-2009| VirginiaTech-NA-MIC collaboration progress update and planning meeting]], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA
----
* September 30: [[CTSC:ACRIN 09/30/09| Quantitative imaging workshop]] ACRIN fall meeting, Arlington, VA. Workshop in collaboration with Duke University and Johns Hopkins.
* September 25: [[Events:CTK-Workshop-September-2009| 2nd CTK workshop]], Oxford UK
* September 24: [http://campwww.informatik.tu-muenchen.de/AMIARCS09/doku.php Augmented Environments for Medical Imaging including Augmented Reality in Computer-Aided Surgery (AMI ARCS)] MICCAI 2009 workshop, London, UK. Demonstration of the [[DBP2:JHU:PerkStation | Perk Station]]. One-on-one tutorial available [mailto:lasso@cs.queensu.ca] on request.
* September 24: [http://smarts.lcsr.jhu.edu/CAI-Workshop-2009 Systems and Architectures for CAI] MICCAI 2009 workshop, London, UK. Presentation of the [[DBP2:JHU:Roadmap | computer assisted intervention plug-in module for 3D Slicer]].
* September 24: [http://www.cs.ucl.ac.uk/miccai/dmfc Diffusion Modelling and the Fibre Cup] MICCAI 2009 workshop, London, UK. Presentation of the DTI tractography validation pilot study.
* September 20-24: [http://wiki.na-mic.org/Wiki/index.php/2009_prostate_segmentation_challenge_MICCAI Prostate MRI Segmentation Challenge"], [http://grand-challenge2009.bigr.nl/index.php MICCAI 3D Segmentation in the clinic: a grand challenge].
* September 20: [http://lmi.bwh.harvard.edu/DMRI09 MICCAI 2009 Tutorial in London: Trends in High Angular Resolution Diffusion Imaging and Brain Tissue Modelling]
* September 20: [http://people.csail.mit.edu/pohl/pmmia09.html MICCAI 2009 Workshop: Probabilistic Models for Medical Image Analysis]
* September 20: MICCAI Workshop on Information theoretic similarity measures for image registration and segmentation
* September 16-17: [[Sept-2009-SlicerWidgetsBrainstorm|Brainstorming Session on next generation widgets for Slicer]]
----
* August 25: [[Events:Slicer_Workshop_August_2009|Slicer Workshop]] at [http://www.ibmisps-worldcongress.org/precongress.asp IBMISPS], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA
* August 21: [[Events:Registration_Summit_August_2009|Registration Meeting]], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA
----
* June 29: [[Events:CTK-Workshop-June-2009|Common Toolkit Workshop]], [http://www.dkfz.de/index.html DKFZ, Heidelberg, Germany, hosted by the [http://www.dkfz-heidelberg.de/en/mbi/index.html MBI].
* June 28: [http://www.biomedicalimaging.org/2009/Tutorial_04.asp Tutorial on Statistical Shape Analysis: Theory, Software, and Applications] at [http://www.biomedicalimaging.org/2009/default.asp ISBI 2009], Boston, MA.
* June 25: [[Events:TutorialContestJune2009 | Summer 2009 Tutorial Contest]]
* June 22-26: '''[[2009_Summer_Project_Week|The FIRST JOINT Summer Project Week at MIT]]'''
* June 17: [[CAOS2009_Slicer Workshop| Hands-On Workshop for Slicer IGT for Computer Aided Orthopeadic Surgery]]
* June 17: [[SlicerKyusyuJune2009Lecture| Lecture and demonstration, Image Guided Therapy of abdominal organs]], Noby Hata, Kysyu University Medical School, Kyusyu, Japan
* June 16: [[SlicerNagoyaJune2009Workshop| Workshop: How to make your custom IGT software using 3D Slicer]], Noby Hata, Nagoya Institute of Technology, Nagoya, Japan
----
* May 11-12: Core 1 PI meeting, Georgia Tech.
* May 8: [http://www.na-mic.org/Wiki/index.php/IMFAR2009 IMFAR 2009] - [http://www.autism-insar.org/index.php?option=com_content&task=view&id=36&Itemid=105 Presentation], 8th Annual International Meeting for Autism Research (IMFAR) in Chicago, IL] entitled Use of the Slicer3 Toolkit to Produce Regional Cortical Thickness Measurement of Pediatric MRI Data".
* May 8: Focus session on [[Volume Rendering and Loadable Modules: (Engineering & Usability Notes)]].
* May 4-5: Core 1 / Core 2 visit at Georgia Tech ([[May 4, 2009 Notes]], [[May 5, 2009 Notes]]).
----
* March 19: [[NCI Slicer Tutorial 03-19-2009|NCI Slicer tutorial, ]] We had to reschedule! New date TBD!
* March 4: [[2009-03-04-Editor-Usability|Interactive Editor usability]] session in Ron's office
----
* February 24: 1249 Boylston: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Using3.4 Afternoon session to walk through common Slicer3.4 usage scenarios]
* February 24: BWH (location: Mellins Library) [[BWH_RadiologyResident_Training2009.1| NA-MIC 3D Slicer 3.2 Hands-On Workshop]]
* February 17-20: [[GWE_MiniRetreat|GWE Mini Retreat]], Boston, MA
----
* January 28-30: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat_January_28-30,2009 Slicer3 MiniRetreat]
* January 7: [[Events:TutorialContestJan2009| Winter 2009 Tutorial Contest]]
* January 5-9: '''[[AHM_2009| AHM,]] [[2009_EAB|EAB,]] [[2009_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

=== 2008 ===
* December 15-16: [[2008_Engineering_review_at_UNC|2008 Engineering review]], UNC, Chapel Hill
* Fall Semester 2008 Ibanez and Schroeder teach [http://public.kitware.com/OpenSourceSoftwarePractice/index.php/Main_Page Open Source Software Course], Rensselaer Polytechnic Institute
* December 8-12: [[2008_IGT_Project_Week|IGT Hands-on Project Week]], Boston
* December 1: [[Events:RSNA2008| Tutorial]], RSNA]], [http://rsna2008.rsna.org/ RSNA conference website]
----
* November 15-19: [[NA-MIC_Lupus_DBP_Worskhop_SFN2008|NA-MIC Lupus DBP White Matter Lesion Tutorial Release at 2008 Society for Neuroscience Annual Meeting]], Washington, DC
* November 18: [[Slicer3_Q&A_2008-11-18|Slicer Q&A Session]], BWH
* November 4: [[NA-MIC_3D_Visualization_Workshop_Massachussetts_General_Hospital|NA-MIC 3D Visualization Workshop]], Massachusetts General Hospital, Boston, MA
----
* October 30 : [[NA-MIC_3D_Visualization_Workshop_Brigham_and_Women's_Hospital| NA-MIC 3D Visualization Workshop]], Brigham and Women's Hospital, Boston, MA
* October 28: [[Harvard_Medical_Education_Day | Harvard Medical Education Day]], Boston, MA
* October 21: Nobuhiko Hata talk, entitled "Role of Image Processing, Navigation and Robots in MRI-guided Intervention", Bioimaging Sciences Division, Department of Radiology, Yale University School of Medicine, New Heaven, CT
* October 17: Nobuhiko Hata talk, entitled "Role of Image Processing, Navigation and Robots in MRI-guided Intervention", Robarts Institute, University of Western Ontario, Ontario, Canada
* October 15-16: [[Robarts_Training_Session | NA-MIC kit training event at The University of Western Ontario]], London, Ontario, Canada
* October 7: [[Stefan_Baumann_visit | Stefan Baumann, Novartis]], 1249 Boylston St., Boston, MA
* October 7: [[Slicer_Day_October_2008|Slicer in the Fall]], 1249 Boylston St., Boston, MA
----
* September 10: [[Miccai_2008_Tutorial| Interfacing third-party software with the NA-MIC Kit]]: Tutorial at MICCAI 2008, New York City
* September 10: [[Miccai_2008_Prostate_Workshop| Prostate image analysis and computer-assisted intervention]]: Workshop at MICCAI 2008, New York City
* September 6: [[Miccai_2008_Systems_and_Architecture_Workshop| Systems & architecture for computer]] Workshop, MICCAI 2008, New York City
* September 6: [[Miccai_2008_Segmentation_Workshop| Segmentation in the Clinic Challenge]]: Workshop at MICCAI 2008, New York City
* September 3: [[Stanford_2008_Slicer_Workshop| Slicer Training]], Stanford University, CA
----
* August 21-22: [[Events:August2008XNATDesktop|Visit by WashU Developers to Boston for Discussions of XND]]
* August 15: [[Events:NCI_Workshop_August_2008|August 15 2008, NA-MIC Workshop]], NCI
* August 13-14: [[Events:August_2008_NCBC_AHM|NCBC all hands meeting]]
* August 1: [[Events:August2008XNATDesktop| Planning TCon for XNAT Desktop Slicer interface]]
----
* July 30-August 1: [[2008_July_RFA_Experiment_Georgetown | RFA Interventional Experiment]], Georgetown University
* July 17: Steve Pieper presented NA-MIC and Slicer Module development at the [http://www.ipam.ucla.edu/programs/mbi2008/ IPAM MBI] Summer School [[Media:Pieper-UCLA-MBI-2008-07-17.ppt|(Slides)]]
* July 10 or 11: [[2008 July Slicer Introduction to Princess Margaret Hospital|Slicer Introduction]], Princess Margaret Hospital
----
* June 30: Steve Pieper presented at the [http://www.nitrc.org NITRC] all hands meeting.
* June 26: [[2008_June_IGT_Tumor_Growth_Model_Demo_SPL|Tumor Growth Model Software Demo]], SPL
* June 23-27: [[2008_Summer_Project_Week|'''Summer Project Week at MIT''']]
* June 23: [[2008_July_Slicer_IGT_VV_Link_Session_II|Slicer IGT Integration with Brainlab via VVLink]]
* June 16-17: [[2008 June Workshop Germany |Training Event]], Germany
* March - June: [[3D_Ultrasound_Module_in_Slicer_3|Slicer IGT training for graduate students at SJTU, Shanghai, China (every Thursday 10 am - noon)]]
----
* May 22-23: [[2008_Core_1_Core_3_mtg|Cores 1-3 Technical Meeting]], Utah
* May 21: [[2008_Core_1_UNC_Utah_DTI| Core 1 UNC & Utah Technical Meeting about DTI tool development]], Utah
* May 21: Kilian Pohl presented on segmentation tools in 3D Slicer at the [http://www.dkfz.de/en/mbi/index.html Division of Medical and Biological Informatics, DKFZ, Germany] ([[media:Pohl_dkfz_08.pdf | Slides]])
* May 12: [[Events:May12_2008_FirstMondaySeminar | First Monday Seminar Talk given by Drs. Ichiro Sakuma and Nassir Navab]], Brigham and Women's Hospital,
* May 8: [[Events:2008_05_08_Collaboration_UWA_Perth|Conference Call to Explore Collaboration with Adam Wittek]], UWA, Perth, Australia
* May 2: [[2008_5_2_Hata_Talk_U_Michigan | Nobuhiko Hata's talk]], Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI
----
* April 14: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Slicer3_Workshop_UNC_Chapel_Hill_2008#Preparation_for_the_Workshop Full day Slicer 3 Users and Plug-in Workshop] hosted by UNC-Chapel Hill faculty
* April 7: [[2008_David_Hawkes|2008 Dr. David Hawkes of UCL's visit to SPL]]
----
* March 31-April 11: [[2008_Platel_visit_from_TUE|2008 Dr. Platel's, IGT grp leader from Technical University Eindhoven, to SPL]]
* March 24-27: [[2008_Engineering_review_at_Utah|2008 Engineering review]], Utah
* March 19: [[Events:HST-563-March2008|Harvard-MIT Division of Health Sciences and Technology (HST), Lecture on Interventional MRI by Hata, Kikinis, HST 563]]
* March 12: Steve Pieper presented on the NA-MIC Kit and 3D Slicer at the [http://www.cisst.org/wiki/Seminar_2008_03_12_3D_Slicer Johns Hopkins CISST] ([[media:Pieper-JHU-seminar-2008-03-12.ppt | Slides]])
* March 10-11: [[IGT:March_2008_IGT_Workshop|IGT Workshop, Rockville, MD]]
* Discussion of NA-MIC Kit for Cardiac EP with [http://www.bidmc.harvard.edu/cmr BIDMC].
----
* February 20: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Spring-2008-User-Training#Preparation_for_the_Workshop Spring 2008 Slicer3 User Training Workshop ] at the SPL 1249 Boylston St, Boston
* February 5-7: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat Slicer3 Mini-Retreat, Boston]
----
* January 7-11: '''[[AHM_2008| AHM,]] [[2008_EAB|EAB,]] [[2008_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''

=== 2007 ===
* December 12-14: [[2007_December_Slicer_IGT_Programming|Slicer IGT Programming Event]]
----
* November 2: [http://www.insightsoftwareconsortium.org/wiki/index.php/2007_MICCAI_Open_Workshop Third Annual Open Source Workshop at MICCAI]
----
* October 16-17: [http://nbirn.net/about/current/ahm2007.shtm BIRN AHM] Query Atlas and Qdec interfaces in Slicer 3 presented at the BIRN AHM.
* October 14-20: [[2007_October_Collaboration_Visit_Robert_Israel|Robert Israel Collaboration Visit to the Surgical Planning Laboratory]]
** [http://wiki.na-mic.org/Wiki/index.php/Slicer3:Module:QueryAtlas See this page] for links to QueryAtlas slides, movies and example datasets.
** [http://wiki.na-mic.org/Wiki/index.php/Image:Slicer3QDEC_AHM2007.ppt See this page] for links to Qdec slides.
* October 1-2: [[SanteFe.Tractography.Conference | Contrasting Tractography Methods Conference, Santa Fe]]
----
* September 12: [[Engineering:September 12, 2007 | Engineering End of Summer Meeting]]
* September 11: [[GPU.Enabled.Tools.Meeting | GPU-enabling of NA-MIC Algorithms, Boston]]
----
* August 21: [[DBP2:UNC:Cortical Thickness Roadmap | UNC DBP Roadmap Tcon]]
----
* June 25-29: '''[[2007_Programming/Project_Week_MIT|Summer Project Week at MIT]]'''
* June 9: [[Training:OHBM2007_Training_Workshop|OHBM DTI Training Workshop, Chicago]]
* June 1: [[2007_Pohl_at_CCB|Pohl Talk]], CCB: A Hierarchical Segmentation Algorithm for MR Brain Images
----
* May 29-31: [[2007_Core_1_Meeting|Annual Core 1 Workshop]], Boston
----
* April 24: Steve Pieper presented Slicer3 and the NA-MIC Kit to the [http://gray.mgh.harvard.edu/content/index.php Medical Physics group at MGH] [http://wiki.na-mic.org/Wiki/images/9/9c/Pieper-MGH-medical-physics-2007-04-24.ppt (slides)]
----
* March 29-30: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat_March_29%2C_30%2C_2007 Slicer3 Mini-Retreat], Boston
----
* February 21-22: Vince Calhoun from MIND is visiting at MIT and MGH [http://www.csail.mit.edu/events/eventcalendar/calendar.php?show=event&id=1349 Talk announecement]
* February 3 and 10: [http://mri.radiology.uiowa.edu/mediawiki/index.php/ITK_Programming_Short_Course_-_Feb_2007 Iowa ITK Programming Short Course]
* February 7-8: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat Slicer3 Mini-Retreat], Boston
----
* January 29: [[P41-2007-Joint-Retreat | CFIT NAC P41 2007 Joint Retreat]]
* January 16: [[2007-01-16 Core 5, Core 6 Summit]]
* January 10-12: '''[[AHM_2007|AHM, EAB, Winter Project Half Week in Salt Lake City]]'''

=== 2006 ===
* December 12: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Alpha-release Slicer3 retreat], Kitware, Inc.
----
* November 15: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Usability Usability session with PNL], BWH]
* November 7-8: [[2006_November_Meshing_Project_Visit| Meshing Collaborator Project Visit to BWH]]
* November 1: [[Training:User_Workshop_Fall_HCNR_2006| NA-MIC Training Workshop at the Harvard Center for Neurodegeneration and Repair]], Boston
----
* October 26: [[Oct-26-2006-MIND-visit_Visiting_the_MIND_institute|New DBP MIND Institute Visit]]
* October 23-26: [http://www.nbirn.net/press/current/ahm2006.shtm <nowiki>| BIRN All Hands Meeting</nowiki>]
* October 19-20: [[IGT:October_2006_IGT_Workshop| NCIGT Workshop on Open System Architectures for Image-Guided Therapy]]
* October 17: [[Core1-3-meeting-2006|Coordination meeting]] between Core 1 and Core 3 to plan the specifics for the third and last year of the current DBP's
* October 1: [http://www.insightsoftwareconsortium.org/wiki/index.php/2006_MICCAI_Open_Workshop MICCAI_2006 Open Source Workshop], MICCAI 2006, Copenhagen, Denmark
----
* September 19-20: [[2006_September_Slicer3_Update| Slicer 3 Update Meeting]], Boston, MA
* September 14-15: We have been invited to participate in [http://usms.nist.gov/workshops/bioimaging.htm NIH Workshop on Standards in Change Measurement]. This workshop will potentially set the stage for additional workshops that focus on Image Guided Interventions and Open Source standards.
* September 6: [http://www.ibmisps.org/pdf/InformationparticipantsANGLAIS.pdf 2006 IBMISPS conference:] [[Media:Kikinis-IBMISPS-09-06-2006.ppt|talk]] by [[media:Kikinis-FOSS.ppt|R. Kikinis on FOSS]] ([[2006 FOSS Abstract Kikinis]])
----
* July 19: [[Training:NLM_Workshop_2006| NA-MIC Training Workshop]], NLM
* July 17-19: [[NIH:_2006_All_NCBC_Meeting| All NCBC All Hands Meeting, NLM
* July 13-14: [http://bsp.csie.nctu.edu.tw/lssa06/ 2nd IEEE-NLM International Life Science Systems and Applications Workshop, Lister Hill Auditorium, NIH, chaired by Stephen Wong, co-sponsored by IEEE, NLM, and NAMIC]
* July 2: Ron Kikinis [[Media:NA-MIC-Kit-07-01-2006.ppt| presentation]] (28MB ppt file) at the [http://www.future-cad.org/fcad/Docs/CFP_for_2nd_Int_Sympo_2006_ver3.2.pdf The 2nd International Symposium on Intelligent Assistance in Diagnosis of Multi-Dimensional Medical Images ]
----
* June 26-30: '''[[2006_Programming/Project_Week_MIT|Summer Project Week at MIT]]'''
* June 8-9: [[Georgia_Tech_visit_to_UNC%2C_June_8-9|Georgia Tech visit to UNC: Shape Analysis Discussion]]
* June 5: [http://www.slicer.org/slicerWiki/index.php/Slicer:Slicer3-June-5-2006-Retreat Slicer 3 Retreat]
----
* May 30: [http://www.cimit.org/forum/forum.html CIMIT Forum] with Steve Pieper and Luis Ibanez ([[Media:CIMIT-BIRN-update-2006-05-30.ppt| Steve's Slides]])([[Media:CIMIT-2006-IGSTK-InsightJournal.ppt| Luis' Slides]])
* May 26: [[Training:DTI_Workshop|UNC-Chapel Hill NA-MIC DTI Analysis Training Workshop]]
* May 23-24: [[Algorithms:Core1Visit_May06| NA-MIC Core 1 meeting]], UNC]]
* May 19: [[Slicer:StevePieper_RonKikinis_VisitToDartmouth_051906|Steve Pieper and Ron Kikinis Visit to Dartmouth]]
* May 15: [[DBP:Harvard:Collaboration:GTech#Progress|Delphine Nain]], PNL
----
* April 27: [[Training:NIH_Workshop_2006|NA-MIC Training Workshop]], NIH
* April 24: [http://www.nimh.nih.gov/neuroinformatics/springagenda2006.cfm The Human Brain Project: Linking Within and Beyond] Natcher Conference Center, NIH Campus, Bethesda, Maryland: National Alliance for Medical Image Computing: Science & Technology of One National Center for Biomedical Computing [[Media:NA-MIC_Kit_revised.ppt| (this is a slightly modified version of the presentation)]]
* April 12-13: [[DBP:Harvard:Collaboration:Toronto|James Kennedy and Aristotle Voineskos at the PNL]]
* April 10-11: [[Training:MIND_Institute_Workshop_Spring_2006| NA-MIC Training Workshop]], MIND Institute, NM
* April 10-11: Steve Pieper presented the NA-MIC Kit at [http://www.biomedicalimaging.org ISBI] 2006 on April 7, 2006 ([[Media:NA-MIC-2006-04-07-ISBI.ppt| Slides]], [[Media:Pieper-ISBI-2006-revised.pdf| Paper]]).
* April 3-4: [http://www.slicer.org/slicerWiki/index.php/Slicer3:_Alpha1_Meeting Design Review and Work meeting on Slicer3 (alpha1 release)]
----
* February 22-24: [[Engineering:Slicer3_and_GPU| Meeting at Kitware to discuss Slicer3 (Thursday) and GPU programming (Friday)]]
* February 22: [[DBP:Sylvain_Doug_visit_Dartmouth_Feb_22_2006|Sylvain Bouix to visit Dartmouth]]
* February 20-23: [[IGT:Workshop_Feb_2006|IGT and FUS Workshops]]
----
* January 24: [[Training:User_Workshop_SPL_Winter_HCNR_2005| HCNR User Training Workshop]], Surgical Planning Laboratory, Boston, MA
* January 8-13: '''[[AHM_2006:AHM_2006| AHM, EAB, Winter Project Week in Salt Lake City]]'''

=== 2005 ===
* December 20: [[DBP:Marek_Kubicki_visit_Dartmouth_December_20_2005| Marek Kubicki visit to Dartmouth]]
* December 17: [[Collaboration:GT-UCI| Jim Fallon from UC Irvine visit to Georgia Tech for work on Rule-Based Segmentation]]
* December 14: [[DBP:Andy_Saykin_visit_BWH_December_14_2005|Andy Saykin and Group visit to Brigham and Women's Hospital]]
* December 1: [[DBP:Dartmouth_Harvard_Slicer_Training_12_01_2005| Dartmouth Group Slicer Training Followup at Harvard]], 1249 Boylston St., Boston, MA
----
* November 27-December 2: [http://rsna2005.rsna.org/rsna2005/V2005/index.cvn RSNA 2005, Chicago: Slicer session], Open source imaging tools workshop
* November 18: [[DBP:Harvard:Collaboration:GTech#Progress|Ramsey Al-Hakim at the PNL]]
* November 17-18: [[Collaboration:GT-Kitware|John Melonakos at Kitware -- Bayesian Classification Filter addition to ITK]]
* November 16: [[IGT:2005_Nov_16_IGT_Consortium_Kickoff| IGT Consortium Kickoff]]
* November 16: [[Collaboration:UNC-UCI|Jim Fallon and Martina from UC Irvine visit to UNC on DTI tools and clinical projects]]
* November 15: [[Engineering:Slicer3.0_November_15_2005| Slicer 3.0 Meeting]], Surgical Planning Laboratory, Boston, MA
----
* October 29: [[Dissemination:MICCAI_Workshop_2005|ISC and NA-MIC Workshop on Open Source Toolkits, Applications, and their uses in Medical Image Analysis]], MICCAI 2005, Palm Springs, CA
* October 29: Informal NA-MIC Lunch, MICCAI 2005, Palm Springs, CA
* October 20: [[2005_AHM:_3D_Slicer/Freesurfer_Workshop|Slicer Training Workshop, AHM BIRN]], San Diego, CA
* October 7: [[Collaboration:UNC-PNL|UNC visit at the Psychiatry NeuroImaging Laboratory]]
* October 5-7: [[Dissemination:EPFL_Workshop_2005| Advanced ITK and Slicer Workshop]], Swiss Federal Institute of Technology (EPFL), Lausanne, Switzerland
----
* September 30: [[Training:User_Workshop_SPL_Fall_2005|User Training Workshop]], Surgical Planning Laboratory, Boylston St, Boston, MA
* September 26-28: [[Engineering:Core_3_Programming_Week#1_Feedback|DBP and Engineering Session on Feedback from Programming Week Projects, and Planning the next 6-months]]
* September 16: [[Training:User_Workshop_MGH_Summer_2005| User Training Workshop]], MGH
----
* August 11: [[Dissemination:CSB2005|Invited Lecture about NA-MIC]]
----
* July 20: [[Collaboration:Workshop_July_20_2005|UNC visit of Georgia Tech for collaborative work on shape and DTI algorithms]]
----
* June 27-July 1: [[Engineering:Programmers_Week_Summer_2005| '''Summer Project Week at MIT''']]
* June 22-23: [[Dissemination:NCRR_NIBIB_PI_Meeting_June_22-23_2005|NCRR/NIBIB PI Meeting]]
* June 16-19: [[Collaboration:Workshop_June_16-19_2005|Georgia Tech visit of UC-Irvine for collaborative work on anatomically accurate algorithms.]]
----
* May 26-27: [[Dissemination:Workshop_May_26-27_2005|User Training and Dissemination Workshop]], at Dartmouth
----
* April 21-22: [[DBP:Andy_Saykin_visit_BWH_April_21_2005| Andy Saykin visit to Brigham and Women's Hospital and MIT]]
----
* March 25: University of Utah visit of Harvard VA for collaborative work on DTMRI.
* March 21-23: [[FBIRN:retreat2005|fBIRN Retreat in Irvine with User Tutorials for Slicer, Brains2 Wednesday on March 23]]
----
* February 20-22: [[AHM_2005:Main|'''The First All-Hands-Meeting and Programming Event in Salt Lake City, Utah''']]
* February 17-18: [[Dissemination:Workshop_Feb17-18_2005| Dissemination Workshop]], UCSD]]
----
* January 26: Slicer User Workshop at BWH: [http://www.slicer.org/slicerWiki/index.php/Slicer:User_Workshop_Jan26 Information for Atendees]
* January 24-25: Dissemination Workshop at [[Dissemination:Workshop_Jan24-25_Boston|Agenda]], [[Dissemination:Workshop_Jan2005_Interested_Attendee_List|List of Participants]], [[Talk:Dissemination:Workshop_Jan24-25_Boston_Feedback|Attendee Feedback]]
* January 17-18: [http://www.imaginggenetics.uci.edu First International Imaging Genetics Conference] at the Beckman Center of the National Academy of Sciences in Irvine, CA.

=== 2004 ===

* December 9-10: Dissemination Workshop in the Surgical Planning Laboratory, BWH: [[Dissemination:Workshop_Dec9-10_Boston|Agenda]], [[Dissemination:Workshop_Dec9-10_Boston_Presentations|Presentations]], [[Dissemination:Workshop_Dec9:10_Attendees_List|List of Participants]], [[Dissemination:Workshop_Dec9:10_Summary|Summary]], [[Talk:Dissemination:Workshop_Dec9-10_Boston_Feedback|Attendee Feedback]]
----
* November 16: Dissemination Meeting: [[Dissemination:Kickoff_Agenda|Agenda]], [[Dissemination:Kickoff_Summary|Summary]]
----
* October 15: [[Kickoff:Main| NA-MIC Kickoff Meeting]]

2017 Winter Project Week/SlicerShape

2017-01-21T19:08:00Z

Bpaniagua: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
File:SALT_SoftwareWorkflow_Paniagua2017.jpg
File:SALT_DataImporter_Paniagua2017.jpg
File:SlicerSALT_Dashboards.png
File:Shape_regression_slicer.png
File:GroupsExtensionGUI.png

</gallery>

==Key Investigators==

* Beatriz Paniagua (Kitware, Inc.)
* Johan Andruejol (Kitware, Inc.)
* JC Fillon-Robin (Kitware, Inc.)
* James Fishbaugh (NYU)
* Priscille de Dumast (UofM)
* UNC, NYU, MDAnderson

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* SALT Shape AnaLysis Toolbox, will be a comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. SALT will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
* SALT will be a packaged as a customized version of Slicer, but all different functional units of SALT will be disseminated as extensions as well and will contribute back to the platform.
* The main objective of this project will be touching base with the Slicer community and making sure our efforts are synergetic for other Slicer researchers.
|

* We will have a breakout session 9am on Wednesday to talk about the different shape functionalities of Slicer, and how Slicer can help SALT and how SALT can help the platform. Come join us!!
* I would like to continue some discussions on how the customized versions of Slicer and Slicer co-exist. During Project Week 2016, there were discussions on how the new website was going to be and how the different Slicer eco-systems were going to be acknowledged, I wonder what happened with that. I would like to identify some key players and make a decision.
* I will get started developing the dissemination infrastructure and dashboards during the week
* I will get started developing a customized version of Slicer for SALT.
|

* Got started with setting up the testing infrastructure
** Dashboard created.
** [https://github.com/Kitware/slicerSALT Repository created]
* Important design decisions were made thanks to the breakout session
** Batch processing approaches
** Slicer interaction
* Some modules have started to make progress and have working prototypes
** James
** Priscille
* Future steps
** Continue setting software infrastructure
** Start methodology implementation
**
|}

==Breakout session notes==
[https://docs.google.com/presentation/d/1CbddFklbMS-96CF0XJMZCA9o0MwXh2neo6fc-C6Ia7E/edit?usp=sharing Slides]

* Slicer.org bridging with all Slicer customizations available
** We will need to change infrastructure of slicer.org to acknowledge all the different customized versions of the program. Bea will give this a go.
** Tutorials, forums, mailing lists should be included there.

* Architectural design decisions
** Improving support for vtkMRMLModelNode.
*** Visualization - Color maps, Surface pre-processing algorithms
*** Support for 4D support - Sequences
** New vtkMRML*Node classes
** S-reps

* Improving user experience
** Providing a lot of feedback to the user
*** Quality of inputs and outputs
*** Speed, computation time
**** Obtain some sort of benchmarks of computational performance based on the OS requirements. kwsyslibrary can provide information of the program running. Another idea is to run a small subset of the batch processing and provide some information of how much did it take and how much the rest of the computation is going to take.
**** The user's frustration comes from the unexpected time delay when you run a method (expecting 1 min, waiting 1 h) Slicer has progress bars (Andras Lasso) is saying progress bar have phases and we should use it. They have a preview for parameter tuning and then they run the long method (preview on small data)
**** Running in separate process is good because you can kill the process anytime

* Thinking about the specific needs of the user base of slicerSALT
** These methods take a lot of time to compute and usually involve a batch process
*** Greg Sharp SlicerRT has a stand-alone tool that submits and logs jobs into Slicer
*** Ron Kikinis' input is that Slicer is not really designed for not interactive things, but you can have non-interactive mode and run things
*** Girder has ways to submit jobs and save outputs into it (Breakout session tomorrow)

==Shape Regression==

A prototype extension for shape regression is working in Slicer (see screenshot at the top of the page). We learned about the sequences extension which can play back sequences of various data types, including surfaces. It already has a lot of the functionality we will need for visualizing 4D shape models, allowing for more rapid prototyping and development in general. Plotting features such as volume will also be straightforward.

Shape regression can take several minutes to several hours, so the user needs some useful feedback. One idea that the community seems to favor is a dashboard application which can launch and monitor the progress of jobs. For processes that can take hours, this seems to be a better idea than a progress bar.

==Background and References==

2017 Winter Project Week

2017-01-13T16:03:33Z

Bpaniagua: /* Shape Analysis, Segmentation */

__NOTOC__
[[image:PW-Winter2017.png|300px]]

=Welcome to the web page for the 24th Project Week!=

The 24th NA-MIC Project Week open source hackathon is being held during the week of January 9-13, 2017 at MIT. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].

==Logistics==

*'''Dates:''' January 9-13, 2017.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: [[MIT_Project_Week_Rooms#Kiva|Kiva]], R&D)
*'''Transportation:''' Public transportation is highly encouraged, as no parking permits will be issued by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]
*'''REGISTRATION:''' Register [https://www.regonline.com/2017projectweek here]. Registration Fee: $330.
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.
*'''Next Project Week:''' [http://wiki.na-mic.org/Wiki/index.php/2017_Summer_Project_Week June 26-30, 2017, Catanzaro, Italy]

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), was founded in 2005 and chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

A summary of all previous Project Events is available [[Project_Events#Past_Project_Weeks|here]].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

Conference call phone number and notes are available [[TCONS:2017_Winter_Project_Week|here]].

==Calendar==

'''''The events are listed in the calendar below. Note that due to a current known limitation of our infrastructure, you will need to manually navigate to the week of January 8, 2017 to see the relevant events.''''' 

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20170108/20170114
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

*Use this [[2017_Project_Week_Template | Updated Template for project pages]]

== Deep Learning and GPUs ==
#[[2017 Winter Project Week/Deep Learning for Medical Image Computation| Deep Learning for Medical Image Computing]] (Tina Kapur)
#[[2017 Winter Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Paolo Zaffino, Ziyang Wang, Guillaume Pernelle, Tina Kapur)
#[[2017 Winter Project Week/DeepInfer| DeepInfer: Open-source Deep Learning Deployment Toolkit]] (Alireza Mehrtash, Mehran Pesteie, Yang (Silvia) Yixin, Tina Kapur, Sandy Wells, Purang Abolmaesumi, Andriy Fedorov)
#[[2017 Winter Project Week/Diffusely abnormal white matter segmentation with 3d U-net| Diffusely abnormal white matter segmentation with 3d U-net]] (Mohsen Ghafoorrian, Bram Platel, Sandy Wells, Tina Kapur, Charles Guttmann)
# [[2017 Winter Project Week/OCM-MRI | Deep Learning for Synthetic MRI]] (Frank Preiswerk, Yaofei "Ada" Wang)
#[[2017 Winter Project Week/An open-source tool to classify TMJ OA condyles | An open-source tool to classify TMJ OA condyles]] (Priscille de Dumast, Juan Carlos Prieto, Beatriz Paniagua)
#[[2017 Winter Project Week/Evaluate Deep Learning for binary cancer legion classification | Evaluate Deep Learning for binary cancer lesion classification]] (Curt Lisle)
#[[2017 Winter Project Week/Population Based Image Imputation | Population Based Image Imputation]] (Adrian Dalca, Katie Bouman, Mert Sabuncu, Polina Golland)
#[[2017 Winter Project Week/Knee Cartilage Segmentation | Knee Cartilage Segmentation]] (Hans Meine)

== Web Technologies ==
#[[2017_Winter_Project_Week/WebTechnologyAndSlicer| Web Technology and Slicer]] (Steve Pieper, Erik Zeigler, Curt Lisle, Satra Ghosh, Hans Meine)
#[[2017 Winter Project Week/Slicer Qt5 and Python3 | Slicer Qt5 and Python3]] (Steve Pieper, Jean-Christophe Fillion-Robin, Andras Lasso, Andrey Fedorov)
#[[2017 Winter Project Week/IPFS_NoSQL_Combination | IPFS and NoSQL for cloud databases]] (Hans Meine, Steve Pieper, Satra Ghosh)
#[[Explore integration of Web-based imaging workflows with Slicer | Explore integration of Web-based imaging workflows with Slicer ]] (Curt Lisle, Satra Gosh, Steve Peiper)
#[[2017 Winter Project Week/Web-based system to federate biological, clinical and morphological data | Web-based system to federate biological, clinical and morphological data]] (Juan Carlos Prieto, Clément Mirabel)
#[[2017_Winter_Project_Week/OAuth2SlicerPathology | OAuth2.0 authentication in SlicerPathology]] (Erich Bremer, Steve Pieper)
#[[2017 Winter Project Week/Electron App to add, navigate and visualize DICOM images | Electron App to add, navigate and visualize DICOM images]] (Smruti Padhy, Satrajit Ghosh, Mathias Goncalves)
#[[2017 Winter Project Week/AMI: A 3D Medical Imaging Javascript Library | AMI: A 3D Medical Imaging Javascript Library]] (Rudolph Pienaar, Jorge Luis Bernal Rusiel, Nicolas Rannou, Teodora Szasz)

== IGT: Navigation, Robotics, Surgical Planning ==
#[[2017 Winter Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization III: The Refining]] (Andras Lasso, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Janne Beate Bakeng)
#[[2017 Winter Project Week/ROS Surface Scan | ROS Surface Scan]] (Tobias Frank, Junichi Tokuda, Longquan Chen)
#[[2017 Winter Project Week/Open_Source_Electromagnetic_Trackers | Open Source Electromagnetic Trackers]] (Peter Traneus Anderson)
#[[2017 Winter Project Week/LiverResectionPlanning | Liver resection planning extension]] (Louise Oram, Andrey Fedorov, Christian Herz, Andras Lasso)
#[[2017 Winter Project Week/3DSurgicalPlanningBreastReconstruction| 3D surgical planning solution for autologous breast reconstruction]] (Michael Chae, Andras Lasso, David Garcia, Julian Smith, Warren Rozen, David Hunter-Smith)
#[[2017 Winter Project Week/Intraoperative_Functional_Visualization | Visualization Concept for Intraoperative Use of Functional Mapping Data ]] (Anna Roethe, Rebekka Lauer, Prashin Unadkat, Sarah Frisken)
#[[2017 Winter Project Week/Integrative_Intraoperative_Interface | Integrative Interface for Intraoperative Software Applications ]] (Anna Roethe, Rebekka Lauer, Prashin Unadkat, Sarah Frisken)

==dMRI==
#[[2017 Winter Project Week/WhiteMatterAnalysis | Fiber endpoint analysis for neurosurgical planning]] (Fan Zhang, Shun Gong, Isaiah Norton, Ye Wu, Lauren J. O'Donnell)
#[[2017 Winter Project Week/LORDWI | Density-based DMRI registration ]] (Henrik Groenholt Jensen, Lauren J. O'Donnell, Tina Kapur, Fan Zhang, Carl-Fredrik Westin)
#[[2017 Winter Project Week/SlicerDMRIDocumentationAndTesting | SlicerDMRI Testing and Documentation]] (Shun Gong, Ye Wu, Isaiah Norton, Fan Zhang, Lauren J. O'Donnell)
#[[2017 Winter Project Week/DiPy_in_Slicer | WMA & DiPy integration in Slicer]] (Isaiah Norton, Lauren J. O'Donnell)
#[[2017 Winter Project Week/DWI_Similarity_Metrics | Identification of information-rich patches in Diffusion-Weighted Images]] (Laurent Chauvin, Fan Zhang, Lauren J. O'Donnell, Matthew Toews)

==Quantitative Imaging Informatics==
#[[2017 Winter Project Week/dcmqi | dcmqi library]] (Andrey Fedorov, Christian Herz, JC, Steve Pieper)
#[[2017 Winter Project Week/QuantitativeReporting | DICOM QuantitativeReporting]] (Christian Herz, Andrey Fedorov, Andras Lasso, Csaba Pinter)
#[[2017 Winter Project Week/PyRadiomics | PyRadiomics library ]] (Joost van Griethuysen, Hugo Aerts, Andrey Fedorov, Steve Pieper, Jean-Christophe Fillion-Robin)
#[[2017 Winter Project Week/PkModeling | PkModeling - DCE Modeling Accuracy and UI/UX Update]] (Andrew Beers)
#[[2017 Winter Project Week/SegWithSubtractionAndModel| Manual Segmentation Module w/ Subtraction Maps + Delaunay Models]] (Andrew Beers)

== Shape Analysis, Segmentation ==
#[[2017 Winter Project Week/SlicerShape | Slicer for Shape Analysis ]] (Beatriz Paniagua, Johan Andruejol, JC Fillon-Robin, James Fishbaugh, Priscille de Dumast)
#[[2017 Winter Project Week/MandibularRegression | Mandibular and maxillary Shape Regression ]] (Beatriz Paniagua, Clement Mirabel, Priscille de Dumast, James Fishbaugh, Lucia Cevidanes, Daniella Garib)
#[[2017 Winter Project Week/Slicer_VR | Slicer + VR = <3]] (Adam Rankin, Andras Lasso, Ryan D'Souza (NDI), Matthew Jolley (Children's Hospital of Philadelphia), Kitware+Slicer dev (JC,JFinet,etc...)
#[[2017 Winter Project Week/HyperspectralOpht | Slicer for Hyperspectral Ophthalmology Analysis ]] (Sungmin Hong)
#[[2017 Winter Project Week/ProstateSectorSegmentation | Prostate Gland Sector Segmentation]] (Anneke Meyer, Andrey Fedorov, Alireza Mehrtash, Christian Hansen, Teodora Szasz)
#[[2017 Winter Project Week/Multi-ModalitySegmentationOfUSandMRImagesForGliomaSurgery | Multi-Modality Segmentation of US- and MR-Images for Glioma Surgery]] (Jennifer Nitsch)
#[[2017 Winter Project Week/MeningiomaSegmentation | Segmentation of meningiomas in structural MR images]] (Jakub Kaczmarzyk, Satrajit Ghosh, Omar Arnaout)
#[[2017 Winter Project Week/CoronarySegmentationTool| Automatic and Manual Segmentation Tool of Coronary Artery from CTA imaging]] (Haoyin Zhou, Jayender Jagadeesan)

== Infrastructure ==
#[[2017 Winter Project Week/SubjectHierarchyRefactoring | Subject hierarchy single-node refactoring]] (Csaba Pinter)
#[[2017 Winter Project Week/ImprovementsToSegmentEditor | Improvements to Segment Editor]] (Csaba Pinter, Andras Lasso)
#[[2017 Winter Project Week/Plastimatch19 | Plastimatch multi-planar and multi-metric registration ]] (Greg Sharp)
#[[2017 Winter Project Week/UpdatingCommunityForums | Updating Slicer Community Infrastructure (Discourse, GitHub, Gitter, ???)]] (Andrey Fedorov, Andras Lasso, Steve Pieper, Mike Halle, Isaiah Norton, and The Community)
#[[2017 Winter Project Week/SlicerGeometryModifier | Slicer support for interactive modification of 3D models ]] (Johan Andruejol, Beatriz Paniagua, Andras Lasso)
#[[2017 Winter Project Week/Support_for_volumetric_meshes | Support for volumetric meshes ]] (Alexis Girault, Curtis Lisle, Steve Pieper)
#[[2017 Winter Project Week/Improve_Matlab_integration | Improve Matlab integration ]] (Alexis Girault)
#[[2017 Winter Project Week/Organizations | Slicer* Community Topics, Projects, Flavors: The SLICERVERSE ]] (Beatriz Paniagua, Lauren O'Donnell, Isaiah Norton, Gregory Sharp, Louise Oram)

==Training and Dissemination==
#[[2017 Winter Project Week/2017TutorialContest| Tutorial contest]] (Sonia Pujol)
#[[2017 Winter Project Week/2017 NVIDIA Demo Contest|NVIDIA Demo Contest]] (Abdul Halabi, Abel Brown)
#[[2017 Winter Project Week/2017 Winter Project Week Surgery|Project Week Survey]] (Krisztina Fischer, Tina Kapur)
#[[2017 Winter Project Week/Next project week| Next project week: PW#25]] (Paolo Zaffino, Maria Francesca Spadea, Tina Kapur)

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [https://www.regonline.com/2017projectweek registration site].

# Aman Shboul, Zaina :: Old Dominion University
# Aerts, Hugo :: DFCI-Harvard
# Alam, Mahbubul :: Old Dominion University
# Anderson, Peter :: Retired
# Andruejol, Johan :: Kitware, Inc.
# Bakeng, Janne Beate :: SINTEF
# Beers, Andrew :: Massachusetts General Hospital
# Bernal Rusiel, Jorge Luis :: Boston Children's Hospital
# Bremer, Erich :: Stony Brook University
# Burke, Brice :: American University of Antigua College of Medicine
# Cetin Karayumak, Suheyla :: Brigham and Women's Hospital
# Chae, Michael :: Monash University
# Chauvin, Laurent :: ETS
# Chen, Longquan :: Surgical Planning Lab
# Dalca, Adrian :: Massachusetts Institute of Technology
# DiPrima, Tammy :: Stony Brook University
# Drouin, Simon :: Montreal Neurological Institute
# Fan, Zhipeng :: Brigham and Women's Hospital
# Fedorov, Andriy :: Brigham and Women's Hospital
# Fillion-Robin, Jean-Christophe :: Kitware, Inc.
# Fishbaugh, James :: New York University
# Frank, Tobias :: Leibniz Universität Hannover
# Frisken, Sarah :: Brigham and Women's Hospital
# García Mato, David :: Queen´s University / Universidad Carlos III de Madrid
# Ghafoorian, Mohsen :: Brigham and Women's Hospital
# Ghosh, Satrajit :: Massachusetts Institute of Technology
# Girault, Alexis :: Kitware, Inc.
# Golland, Polina :: Massachusetts Institute of Technology
# Gollub, Randy :: Massachusetts General Hospital
# Goncalves, Mathias :: Massachusetts Institute of Technology
# Gong, Shun :: Brigham and Women's Hospital
# Guerrier de Dumast, Priscille :: University of Michigan
# Halle, Michael :: Brigham and Women's Hospital
# Harris, Gordon :: Massachusetts General Hospital
# Helba, Brian :: Kitware, Inc.
# Herz, Christian :: Brigham and Women's Hospital
# Hong, Sungmin :: New York University
# Hosny, Ahmed :: Dana-Farber
# Jagadeesan, Jayender :: Brigham and Women's Hospital
# Jarecka, Dorota :: Massachusetts Institute of Technology
# Jensen, Henrik G. :: University of Copenhagen
# Kaczmarzyk, Jakub :: Massachusetts Institute of Technology
# Kapur, Tina :: Brigham and Women's Hospital
# Kennedy, David :: UMass Medical School
# Kikinis, Ron :: Brigham and Women's Hospital
# Lasso, Andras :: PerkLab, Queen's University
# Lauer, Rebekka :: Humboldt University Berlin
# Lisle, Curtis :: KnowledgeVis, LLC
# Mastrogiacomo, Katie :: Brigham and Women's Hospital
# Mateus, D. :: TUM
# Mehrtash, Alireza :: Brigham and Women's Hospital
# Meine, Hans :: University of Bremen
# Meyer, Anneke :: University of Magdeburg
# Miller, James :: GE Research
# Mirabel, Clement :: University of Michigan
# Mousavi, Parvin :: Brigham and Women's Hospital
# Nitsch, Jennifer :: University of Bremen
# Norton, Isaiah :: Brigham and Women's Hospital
# O'Donnell, Lauren :: Brigham and Women's Hospital
# Onieva, Jorge :: Brigham and Women's Hospital
# Oram, Louise :: The Intervention Centre-Oslo University Hospital
# Padhy, Smruti :: Massachusetts Institute of Technology
# Paniagua, Beatriz :: Kitware, Inc.
# Parmar, Chintan :: DFCI-Harvard Medical School
# Peled, Sharon :: Brigham and Women's Hospital
# Pienaar, Rudolph :: Boston Children's Hospital
# Pieper, Steve :: Isomics, Inc.
# Pinter, Csaba :: Queen's University
# Preiswerk, Frank :: Brigham and Women's Hospital/Harvard Medical School
# Prieto, Juan :: NIRAL
# Pujol, Sonia :: Brigham and Women's Hospital/Harvard Medical School
# Rankin, Adam :: Robarts Research Institute
# Rheault, Francois :: Université de Sherbrooke
# Roethe, Anna :: Humboldt University / Charité University Hospital Berlin
# Ross, James :: Brigham and Women's Hospital
# Szczepankiewicz, Filip :: Lund University
# Sharp, Gregory :: Massachusetts General Hospital
# Sridharan, Patmaa :: University of Pennsylvania-CBICA
# Szasz, Teodora :: University of Chicago
# Tokuda, Junichi :: Brigham and Women's Hospital
# Unadkat, Prashin :: Brigham and Women's Hospital
# Van Griethuysen , Joost :: Netherlands Cancer Institute
# Vidyaratne, Lasitha :: Old Dominion University
# Wang, Yaofei :: Brigham and Women's Hospital
# Wang, Ziyang :: Brigham and Women's Hospital
# Wei, Dawei :: Brigham and Women's Hospital
# Westin, Carl-Fredrik :: Brigham and Women's Hospital, Harvard Medical School
# Woo, Jonghye :: Massachusetts General Hospital
# Xu, Wanxin :: Brigham and Women's Hospital
# Yang, Yixin :: Brigham and Women's Hospital
# Ye, Wu :: Brigham and Women's Hospital
# Zaffino, Paolo :: Magna Graecia University of Catanzaro, Italy
# Zeleznik, Roman :: DFCI
# Zhang, Fan :: Brigham and Women's Hospital
# Zhang, Hongtao :: Hebei General Hospital
# Zhang, Miaomiao :: Massachusetts Institute of Technology
# Zhang, Yuqian :: Brigham and Women's Hospital
# Zhou, Haoyin :: Brigham and Women's Hospital
# Ziegler, Erik :: Open Health Imaging Foundation/Mass General Hospital

2017 Winter Project Week/MandibularRegression

2017-01-13T16:02:10Z

Bpaniagua:

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
Image:Growingmaxilla.gif

</gallery>

==Key Investigators==
* James Fishbaugh NYU
* Beatriz Paniagua Kitware Inc
* Lucia Cevidanes UofM
* Guido Gerig NYU
* Tung Nguyen UNC
* Clement Mirabel UofM
* Priscille de Dumast UofM
* Daniella Garib Bauru University

==Background and References==
Running shape regression on maxillary casts and mandibular shapes.

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Continue the work from [https://www.na-mic.org/Wiki/index.php/2014_Winter_Project_Week:4DShape_Analysis_of_mandibular_changes Winter Project Week 2014]
* Add some more subjects to the study
* Prepare publication in IADR 2017
|

* Meet with James about this project and its context within Slicer
** Visualization of 4D results in Slicer
|

* New data has been processed
** Maxillary shapes
** Mandibular shapes are optimizing, will compute over the weekend
|}

==Background and References==

File:Growingmaxilla.gif

2017-01-13T16:01:20Z

Bpaniagua:

2017 Winter Project Week/MandibularRegression

2017-01-13T15:57:39Z

Bpaniagua: /* Project Description */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]

</gallery>

==Key Investigators==
* James Fishbaugh NYU
* Beatriz Paniagua Kitware Inc
* Lucia Cevidanes UofM
* Guido Gerig NYU
* Tung Nguyen UNC
* Clement Mirabel UofM
* Priscille de Dumast UofM
* Daniella Garib Bauru University

==Background and References==
Running shape regression on maxillary casts and mandibular shapes.

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Continue the work from [https://www.na-mic.org/Wiki/index.php/2014_Winter_Project_Week:4DShape_Analysis_of_mandibular_changes Winter Project Week 2014]
* Add some more subjects to the study
* Prepare publication in IADR 2017
|

* Meet with James about this project and its context within Slicer
** Visualization of 4D results in Slicer
|

* New data has been processed
** [https://drive.google.com/file/d/0B_-M3LPWEF4zT1Y0VGlaQXRudXdWcGtkZF9VcFJrcnhQbmFz/view?usp=sharing Maxillary shapes]
** Mandibular shapes are optimizing, will compute over the weekend
|}

==Background and References==

2017 Winter Project Week/MandibularRegression

2017-01-13T14:00:19Z

Bpaniagua: /* Project Description */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]

</gallery>

==Key Investigators==
* James Fishbaugh NYU
* Beatriz Paniagua Kitware Inc
* Lucia Cevidanes UofM
* Guido Gerig NYU
* Tung Nguyen UNC
* Clement Mirabel UofM
* Priscille de Dumast UofM
* Daniella Garib Bauru University

==Background and References==
Running shape regression on maxillary casts and mandibular shapes.

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Continue the work from [https://www.na-mic.org/Wiki/index.php/2014_Winter_Project_Week:4DShape_Analysis_of_mandibular_changes Winter Project Week 2014]
* Add some more subjects to the study
* Prepare publication in IADR 2017
|

* Meet with James about this project and its context within Slicer
** Visualization of 4D results in Slicer
|

* New data has been processed
** Maxillary shapes
** Mandibular shapes are optimizing, will compute over the weekend
|}

==Background and References==

2017 Winter Project Week/SlicerShape

2017-01-13T13:59:00Z

Bpaniagua: /* Project Description */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
File:SALT_SoftwareWorkflow_Paniagua2017.jpg
File:SALT_DataImporter_Paniagua2017.jpg
File:SlicerSALT_Dashboards.png
File:Shape_regression_slicer.png

</gallery>

==Key Investigators==

* Beatriz Paniagua (Kitware, Inc.)
* Johan Andruejol (Kitware, Inc.)
* JC Fillon-Robin (Kitware, Inc.)
* James Fishbaugh (NYU)
* Priscille de Dumast (UofM)

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* SALT Shape AnaLysis Toolbox, will be a comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. SALT will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
* SALT will be a packaged as a customized version of Slicer, but all different functional units of SALT will be disseminated as extensions as well and will contribute back to the platform.
* The main objective of this project will be touching base with the Slicer community and making sure our efforts are synergetic for other Slicer researchers.
|

* We will have a breakout session 9am on Wednesday to talk about the different shape functionalities of Slicer, and how Slicer can help SALT and how SALT can help the platform. Come join us!!
* I would like to continue some discussions on how the customized versions of Slicer and Slicer co-exist. During Project Week 2016, there were discussions on how the new website was going to be and how the different Slicer eco-systems were going to be acknowledged, I wonder what happened with that. I would like to identify some key players and make a decision.
* I will get started developing the dissemination infrastructure and dashboards during the week
* I will get started developing a customized version of Slicer for SALT.
|

* Got started with setting up the testing infrastructure
** Dashboard created.
** [https://github.com/Kitware/slicerSALT Repository created]
* Important design decisions were made thanks to the breakout session
** Batch processing approaches
** Slicer interaction
* Some modules have started to make progress and have working prototypes
** James
** Priscille
* Future steps
** Continue setting software infrastructure
** Start methodology implementation
**
|}

==Breakout session notes==
[https://docs.google.com/presentation/d/1CbddFklbMS-96CF0XJMZCA9o0MwXh2neo6fc-C6Ia7E/edit?usp=sharing Slides]

* Slicer.org bridging with all Slicer customizations available
** We will need to change infrastructure of slicer.org to acknowledge all the different customized versions of the program. Bea will give this a go.
** Tutorials, forums, mailing lists should be included there.

* Architectural design decisions
** Improving support for vtkMRMLModelNode.
*** Visualization - Color maps, Surface pre-processing algorithms
*** Support for 4D support - Sequences
** New vtkMRML*Node classes
** S-reps

* Improving user experience
** Providing a lot of feedback to the user
*** Quality of inputs and outputs
*** Speed, computation time
**** Obtain some sort of benchmarks of computational performance based on the OS requirements. kwsyslibrary can provide information of the program running. Another idea is to run a small subset of the batch processing and provide some information of how much did it take and how much the rest of the computation is going to take.
**** The user's frustration comes from the unexpected time delay when you run a method (expecting 1 min, waiting 1 h) Slicer has progress bars (Andras Lasso) is saying progress bar have phases and we should use it. They have a preview for parameter tuning and then they run the long method (preview on small data)
**** Running in separate process is good because you can kill the process anytime

* Thinking about the specific needs of the user base of slicerSALT
** These methods take a lot of time to compute and usually involve a batch process
*** Greg Sharp SlicerRT has a stand-alone tool that submits and logs jobs into Slicer
*** Ron Kikinis' input is that Slicer is not really designed for not interactive things, but you can have non-interactive mode and run things
*** Girder has ways to submit jobs and save outputs into it (Breakout session tomorrow)

==Background and References==

2017 Winter Project Week/SlicerShape

2017-01-13T13:56:47Z

Bpaniagua:

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
File:SALT_SoftwareWorkflow_Paniagua2017.jpg
File:SALT_DataImporter_Paniagua2017.jpg
File:SlicerSALT_Dashboards.png
File:Shape_regression_slicer.png

</gallery>

==Key Investigators==

* Beatriz Paniagua (Kitware, Inc.)
* Johan Andruejol (Kitware, Inc.)
* JC Fillon-Robin (Kitware, Inc.)
* James Fishbaugh (NYU)
* Priscille de Dumast (UofM)

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* SALT Shape AnaLysis Toolbox, will be a comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. SALT will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
* SALT will be a packaged as a customized version of Slicer, but all different functional units of SALT will be disseminated as extensions as well and will contribute back to the platform.
* The main objective of this project will be touching base with the Slicer community and making sure our efforts are synergetic for other Slicer researchers.
|

* We will have a breakout session 9am on Wednesday to talk about the different shape functionalities of Slicer, and how Slicer can help SALT and how SALT can help the platform. Come join us!!
* I would like to continue some discussions on how the customized versions of Slicer and Slicer co-exist. During Project Week 2016, there were discussions on how the new website was going to be and how the different Slicer eco-systems were going to be acknowledged, I wonder what happened with that. I would like to identify some key players and make a decision.
* I will get started developing the dissemination infrastructure and dashboards during the week
* I will get started developing a customized version of Slicer for SALT.
|

* Got started with setting up the testing infrastructure
** Dashboard created.
** [https://github.com/Kitware/slicerSALT Repository created]
* Important design decisions were made thanks to the breakout session
** Batch processing approaches
** Slicer interaction
* Some modules have started to make progress and have working prototypes
** James
** Priscille
|}

==Breakout session notes==
[https://docs.google.com/presentation/d/1CbddFklbMS-96CF0XJMZCA9o0MwXh2neo6fc-C6Ia7E/edit?usp=sharing Slides]

* Slicer.org bridging with all Slicer customizations available
** We will need to change infrastructure of slicer.org to acknowledge all the different customized versions of the program. Bea will give this a go.
** Tutorials, forums, mailing lists should be included there.

* Architectural design decisions
** Improving support for vtkMRMLModelNode.
*** Visualization - Color maps, Surface pre-processing algorithms
*** Support for 4D support - Sequences
** New vtkMRML*Node classes
** S-reps

* Improving user experience
** Providing a lot of feedback to the user
*** Quality of inputs and outputs
*** Speed, computation time
**** Obtain some sort of benchmarks of computational performance based on the OS requirements. kwsyslibrary can provide information of the program running. Another idea is to run a small subset of the batch processing and provide some information of how much did it take and how much the rest of the computation is going to take.
**** The user's frustration comes from the unexpected time delay when you run a method (expecting 1 min, waiting 1 h) Slicer has progress bars (Andras Lasso) is saying progress bar have phases and we should use it. They have a preview for parameter tuning and then they run the long method (preview on small data)
**** Running in separate process is good because you can kill the process anytime

* Thinking about the specific needs of the user base of slicerSALT
** These methods take a lot of time to compute and usually involve a batch process
*** Greg Sharp SlicerRT has a stand-alone tool that submits and logs jobs into Slicer
*** Ron Kikinis' input is that Slicer is not really designed for not interactive things, but you can have non-interactive mode and run things
*** Girder has ways to submit jobs and save outputs into it (Breakout session tomorrow)

==Background and References==

2017 Winter Project Week

2017-01-12T20:38:15Z

Bpaniagua:

__NOTOC__
[[image:PW-Winter2017.png|300px]]

=Welcome to the web page for the 24th Project Week!=

The 24th NA-MIC Project Week open source hackathon is being held during the week of January 9-13, 2017 at MIT. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].

==Logistics==

*'''Dates:''' January 9-13, 2017.
*'''Location:''' [https://www.google.com/maps/place/MIT:+Computer+Science+and+Artificial+Intelligence+Laboratory/@42.361864,-71.090563,16z/data=!4m2!3m1!1s0x0:0x303ada1e9664dfed?hl=en MIT CSAIL], Cambridge, MA. (Rooms: [[MIT_Project_Week_Rooms#Kiva|Kiva]], R&D)
*'''Transportation:''' Public transportation is highly encouraged, as no parking permits will be issued by MIT. For a list of local garages, please see [http://web.mit.edu/facilities/transportation/parking/visitors/public_parking.html here]
*'''REGISTRATION:''' Register [https://www.regonline.com/2017projectweek here]. Registration Fee: $330.
*'''Hotel:''' Similar to previous years, no rooms have been blocked in a particular hotel.
*'''Next Project Week:''' [http://wiki.na-mic.org/Wiki/index.php/2017_Summer_Project_Week June 26-30, 2017, Catanzaro, Italy]

== Introduction ==
The National Alliance for Medical Image Computing (NAMIC), was founded in 2005 and chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], enhancements to the underlying building blocks [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

[[Engineering:Programming_Events|Project Week]] is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a [http://www.miccai.org/organization MICCAI] endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO].

A summary of all previous Project Events is available [[Project_Events#Past_Project_Weeks|here]].

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list]

==Conference Calls for Preparation==

Conference call phone number and notes are available [[TCONS:2017_Winter_Project_Week|here]].

==Calendar==

'''''The events are listed in the calendar below. Note that due to a current known limitation of our infrastructure, you will need to manually navigate to the week of January 8, 2017 to see the relevant events.''''' 

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NAMIC Winter Project Week
|view=WEEK
|dates=20170108/20170114
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

='''Projects'''=

*Use this [[2017_Project_Week_Template | Updated Template for project pages]]

== Deep Learning and GPUs ==
#[[2017 Winter Project Week/Deep Learning for Medical Image Computation| Deep Learning for Medical Image Computing]] (Tina Kapur)
#[[2017 Winter Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Tina Kapur, Ziyang Wang, Guillaume Pernelle, Paolo Zaffino)
#[[2017 Winter Project Week/DeepInfer| DeepInfer: Open-source Deep Learning Deployment Toolkit]] (Alireza Mehrtash, Mehran Pesteie, Yang (Silvia) Yixin, Tina Kapur, Sandy Wells, Purang Abolmaesumi, Andriy Fedorov)
#[[2017 Winter Project Week/Diffusely abnormal white matter segmentation with 3d U-net| Diffusely abnormal white matter segmentation with 3d U-net]] (Mohsen Ghafoorrian, Bram Platel, Sandy Wells, Tina Kapur, Charles Guttmann)
# [[2017 Winter Project Week/OCM-MRI | Deep Learning for Synthetic MRI]] (Frank Preiswerk, Yaofei "Ada" Wang)
#[[2017 Winter Project Week/An open-source tool to classify TMJ OA condyles | An open-source tool to classify TMJ OA condyles]] (Priscille de Dumast, Juan Carlos Prieto, Beatriz Paniagua)
#[[2017 Winter Project Week/Evaluate Deep Learning for binary cancer legion classification | Evaluate Deep Learning for binary cancer lesion classification]] (Curt Lisle)
#[[2017 Winter Project Week/Convolutional neural nets for lung cancer survival prediction | Convolutional neural nets for lung cancer survival prediction]] (Ahmed Hosny, Chintan Parmar, Roman Zeleznik, Hugo Aerts)
#[[2017 Winter Project Week/Population Based Image Imputation | Population Based Image Imputation]] (Adrian Dalca, Katie Bouman, Mert Sabuncu, Polina Golland)

== Web Technologies ==
#[[2017_Winter_Project_Week/WebTechnologyAndSlicer| Web Technology and Slicer]] (Steve Pieper, Erik Zeigler, Curt Lisle, Satra Ghosh, Hans Meine)
#[[2017 Winter Project Week/Slicer Qt5 and Python3 | Slicer Qt5 and Python3]] (Steve Pieper, Jean-Christophe Fillion-Robin, Andras Lasso, Andrey Fedorov)
#[[2017 Winter Project Week/IPFS_NoSQL_Combination | IPFS and NoSQL for cloud databases]] (Hans Meine, Steve Pieper)
#[[Explore integration of Web-based imaging workflows with Slicer | Explore integration of Web-based imaging workflows with Slicer ]] (Curt Lisle, Satra Gosh, Steve Peiper)
#[[2017 Winter Project Week/Web-based system to federate biological, clinical and morphological data | Web-based system to federate biological, clinical and morphological data]] (Juan Carlos Prieto, Clément Mirabel)
#[[2017_Winter_Project_Week/OAuth2SlicerPathology | OAuth2.0 authentication in SlicerPathology]] (Erich Bremer, Steve Pieper)
#[[2017 Winter Project Week/Electron App to add, navigate and visualize DICOM images | Electron App to add, navigate and visualize DICOM images]] (Smruti Padhy, Satrajit Ghosh, Mathias Goncalves)
#[[2017 Winter Project Week/AMI: A 3D Medical Imaging Javascript Library | AMI: A 3D Medical Imaging Javascript Library]] (Rudolph Pienaar, Jorge Luis Bernal Rusiel, Nicolas Rannou, Teodora Szasz)
#[[2017_Winter_Project_Week/MedicalVisualizerUsingParaViewWeb | Medical Visualizer using ParaViewWeb]] (Teodora Szasz)

== IGT: Navigation, Robotics, Surgical Planning ==
#[[2017 Winter Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization III: The Refining]] (Andras Lasso, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Janne Beate Bakeng)
#[[2017 Winter Project Week/ROS Surface Scan | ROS Surface Scan]] (Tobias Frank, Junichi Tokuda, Longquan Chen)
#[[2017 Winter Project Week/Open_Source_Electromagnetic_Trackers | Open Source Electromagnetic Trackers]] (Peter Traneus Anderson)
#[[2017 Winter Project Week/LiverResectionPlanning | Liver resection planning extension]] (Louise Oram, Andrey Fedorov, Christian Herz, Andras Lasso)
#[[2017 Winter Project Week/3DSurgicalPlanningBreastReconstruction| 3D surgical planning solution for autologous breast reconstruction]] (Michael Chae, Andras Lasso, David Garcia, Julian Smith, Warren Rozen, David Hunter-Smith)
#[[2017 Winter Project Week/Intraoperative_Functional_Visualization | Visualization Concept for Intraoperative Use of Functional Mapping Data ]] (Anna Roethe, Rebekka Lauer, Prashin Unadkat, Sarah Frisken)

==dMRI==
#[[2017 Winter Project Week/WhiteMatterAnalysis | Fiber endpoint analysis for neurosurgical planning]] (Fan Zhang, Shun Gong, Isaiah Norton, Ye Wu, Lauren J. O'Donnell)
#[[2017 Winter Project Week/LORDWI | Density-based DMRI registration ]] (Henrik Groenholt Jensen, Lauren J. O'Donnell, Tina Kapur, Fan Zhang, Carl-Fredrik Westin)
#[[2017 Winter Project Week/SlicerDMRIDocumentationAndTesting | SlicerDMRI Testing and Documentation]] (Shun Gong, Ye Wu, Isaiah Norton, Fan Zhang, Lauren J. O'Donnell)
#[[2017 Winter Project Week/DiPy_in_Slicer | WMA & DiPy integration in Slicer]] (Isaiah Norton, Lauren J. O'Donnell)
#[[2017 Winter Project Week/DWI_Similarity_Metrics | Identification of information-rich patches in Diffusion-Weighted Images]] (Laurent Chauvin, Fan Zhang, Lauren J. O'Donnell, Matthew Toews)

==Quantitative Imaging Informatics==
#[[2017 Winter Project Week/dcmqi | dcmqi library]] (Andrey Fedorov, Christian Herz, JC, Steve Pieper, Teodora Szasz)
#[[2017 Winter Project Week/QuantitativeReporting | DICOM QuantitativeReporting]] (Christian Herz, Andrey Fedorov, Andras Lasso, Csaba Pinter)
#[[2017 Winter Project Week/PyRadiomics | PyRadiomics library ]] (Joost van Griethuysen, Hugo Aerts, Andrey Fedorov, Steve Pieper, Jean-Christophe Fillion-Robin)
#[[2017 Winter Project Week/PkModeling | PkModeling - DCE Modeling Accuracy and UI/UX Update]] (Andrew Beers)
#[[2017 Winter Project Week/SegWithSubtractionAndModel| Manual Segmentation Module w/ Subtraction Maps + Delaunay Models]] (Andrew Beers)

== Shape Analysis, Segmentation ==
#[[2017 Winter Project Week/SlicerShape | Slicer for Shape Analysis ]] (Beatriz Paniagua)
#[[2017 Winter Project Week/MandibularRegression | Mandibular and maxillary Shape Regression ]] (Beatriz Paniagua, Clement Mirabel, Priscille de Dumast, James Fishbaugh, Lucia Cevidanes, Daniella Garib)
#[[2017 Winter Project Week/Slicer_VR | Slicer + VR = <3]] (Adam Rankin, Andras Lasso, Ryan D'Souza (NDI), Matthew Jolley (Children's Hospital of Philadelphia), Kitware+Slicer dev (JC,JFinet,etc...)
#[[2017 Winter Project Week/HyperspectralOpht | Slicer for Hyperspectral Ophthalmology Analysis ]] (Sungmin Hong)
#[[2017 Winter Project Week/GeodesicSegmentationandLungtumorAnalysis| Geodesic Segmentation and Lung tumor Analysis]] (Patmaa S,)
#[[2017 Winter Project Week/ProstateSectorSegmentation | Prostate Gland Sector Segmentation]] (Anneke Meyer, Andrey Fedorov, Alireza Mehrtash, Christian Hansen, Teodora Szasz)
#[[2017 Winter Project Week/Multi-ModalitySegmentationOfUSandMRImagesForGliomaSurgery | Multi-Modality Segmentation of US- and MR-Images for Glioma Surgery]] (Jennifer Nitsch)
#[[2017 Winter Project Week/MeningiomaSegmentation | Segmentation of meningiomas in structural MR images]] (Satrajit Ghosh, Omar Arnaout)
#[[2017 Winter Project Week/CoronarySegmentationTool| Automatic and Manual Segmentation Tool of Coronary Artery from CTA imaging]] (Haoyin Zhou, Jayender Jagadeesan)

== Infrastructure ==
#[[2017 Winter Project Week/SubjectHierarchyRefactoring | Subject hierarchy single-node refactoring]] (Csaba Pinter)
#[[2017 Winter Project Week/ImprovementsToSegmentEditor | Improvements to Segment Editor]] (Csaba Pinter, Andras Lasso)
#[[2017 Winter Project Week/Plastimatch19 | Upgrade Plastimatch extension ]] (Greg Sharp)
#[[2017 Winter Project Week/UpdatingCommunityForums | Updating Slicer Community Infrastructure (Discourse, GitHub, Gitter, ???)]] (Andrey Fedorov, Andras Lasso, Steve Pieper, Mike Halle, Isaiah Norton, and The Community)
#[[2017 Winter Project Week/SlicerGeometryModifier | Slicer support for interactive modification of 3D models ]] (Johan Andruejol, Beatriz Paniagua, Andras Lasso)
#[[2017 Winter Project Week/Support_for_volumetric_meshes | Support for volumetric meshes ]] (Alexis Girault, Curtis Lisle, Steve Pieper)
#[[2017 Winter Project Week/Improve_Matlab_integration | Improve Matlab integration ]] (Alexis Girault)
#[[2017 Winter Project Week/Integrative_Intraoperative_Interface | Integrative Interface for Intraoperative Software Applications ]] (Anna Roethe, Rebekka Lauer, Prashin Unadkat, Sarah Frisken)

==Training and Dissemination==
#[[2017 Winter Project Week/2017TutorialContest| Tutorial contest]] (Sonia Pujol)
#[[2017 Winter Project Week/2017 NVIDIA Demo Contest|NVIDIA Demo Contest]] (Abdul Halabi, Abel Brown)
#[[2017 Winter Project Week/2017 Winter Project Week Surgery|Project Week Survey]] (Krisztina Fischer, Tina Kapur)

==Background and References==


==Next project week==
#[[2017 Winter Project Week/Next project week| Next project week]] (Paolo Zaffino, Maria Francesca Spadea, Tina Kapur)

= '''Registrants''' =

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [https://www.regonline.com/2017projectweek registration site].

# Aman Shboul, Zaina :: Old Dominion University
# Aerts, Hugo :: DFCI-Harvard
# Alam, Mahbubul :: Old Dominion University
# Anderson, Peter :: Retired
# Andruejol, Johan :: Kitware, Inc.
# Bakeng, Janne Beate :: SINTEF
# Beers, Andrew :: Massachusetts General Hospital
# Bernal Rusiel, Jorge Luis :: Boston Children's Hospital
# Bremer, Erich :: Stony Brook University
# Burke, Brice :: American University of Antigua College of Medicine
# Cetin Karayumak, Suheyla :: Brigham and Women's Hospital
# Chae, Michael :: Monash University
# Chauvin, Laurent :: ETS
# Chen, Longquan :: Surgical Planning Lab
# Dalca, Adrian :: Massachusetts Institute of Technology
# DiPrima, Tammy :: Stony Brook University
# Drouin, Simon :: Montreal Neurological Institute
# Fan, Zhipeng :: Brigham and Women's Hospital
# Fedorov, Andriy :: Brigham and Women's Hospital
# Fillion-Robin, Jean-Christophe :: Kitware, Inc.
# Fishbaugh, James :: New York University
# Frank, Tobias :: Leibniz Universität Hannover
# Frisken, Sarah :: Brigham and Women's Hospital
# García Mato, David :: Queen´s University / Universidad Carlos III de Madrid
# Ghafoorian, Mohsen :: Brigham and Women's Hospital
# Ghosh, Satrajit :: Massachusetts Institute of Technology
# Girault, Alexis :: Kitware, Inc.
# Golland, Polina :: Massachusetts Institute of Technology
# Gollub, Randy :: Massachusetts General Hospital
# Goncalves, Mathias :: Massachusetts Institute of Technology
# Gong, Shun :: Brigham and Women's Hospital
# Guerrier de Dumast, Priscille :: University of Michigan
# Halle, Michael :: Brigham and Women's Hospital
# Harris, Gordon :: Massachusetts General Hospital
# Helba, Brian :: Kitware, Inc.
# Herz, Christian :: Brigham and Women's Hospital
# Hong, Sungmin :: New York University
# Hosny, Ahmed :: Dana-Farber
# Jagadeesan, Jayender :: Brigham and Women's Hospital
# Jarecka, Dorota :: Massachusetts Institute of Technology
# Jensen, Henrik G. :: University of Copenhagen
# Kaczmarzyk, Jakub :: Massachusetts Institute of Technology
# Kapur, Tina :: Brigham and Women's Hospital
# Kennedy, David :: UMass Medical School
# Kikinis, Ron :: Brigham and Women's Hospital
# Lasso, Andras :: PerkLab, Queen's University
# Lauer, Rebekka :: Humboldt University Berlin
# Lisle, Curtis :: KnowledgeVis, LLC
# Mastrogiacomo, Katie :: Brigham and Women's Hospital
# Mateus, D. :: TUM
# Mehrtash, Alireza :: Brigham and Women's Hospital
# Meine, Hans :: University of Bremen
# Meyer, Anneke :: University of Magdeburg
# Miller, James :: GE Research
# Mirabel, Clement :: University of Michigan
# Mousavi, Parvin :: Brigham and Women's Hospital
# Nitsch, Jennifer :: University of Bremen
# Norton, Isaiah :: Brigham and Women's Hospital
# O'Donnell, Lauren :: Brigham and Women's Hospital
# Onieva, Jorge :: Brigham and Women's Hospital
# Oram, Louise :: The Intervention Centre-Oslo University Hospital
# Padhy, Smruti :: Massachusetts Institute of Technology
# Paniagua, Beatriz :: Kitware, Inc.
# Parmar, Chintan :: DFCI-Harvard Medical School
# Peled, Sharon :: Brigham and Women's Hospital
# Pienaar, Rudolph :: Boston Children's Hospital
# Pieper, Steve :: Isomics, Inc.
# Pinter, Csaba :: Queen's University
# Preiswerk, Frank :: Brigham and Women's Hospital/Harvard Medical School
# Prieto, Juan :: NIRAL
# Pujol, Sonia :: Brigham and Women's Hospital/Harvard Medical School
# Rankin, Adam :: Robarts Research Institute
# Rheault, Francois :: Université de Sherbrooke
# Roethe, Anna :: Humboldt University / Charité University Hospital Berlin
# Ross, James :: Brigham and Women's Hospital
# Szczepankiewicz, Filip :: Lund University
# Sharp, Gregory :: Massachusetts General Hospital
# Sridharan, Patmaa :: University of Pennsylvania-CBICA
# Szasz, Teodora :: University of Chicago
# Tokuda, Junichi :: Brigham and Women's Hospital
# Unadkat, Prashin :: Brigham and Women's Hospital
# Van Griethuysen , Joost :: Netherlands Cancer Institute
# Vidyaratne, Lasitha :: Old Dominion University
# Wang, Yaofei :: Brigham and Women's Hospital
# Wang, Ziyang :: Brigham and Women's Hospital
# Wei, Dawei :: Brigham and Women's Hospital
# Westin, Carl-Fredrik :: Brigham and Women's Hospital, Harvard Medical School
# Woo, Jonghye :: Massachusetts General Hospital
# Xu, Wanxin :: Brigham and Women's Hospital
# Yang, Yixin :: Brigham and Women's Hospital
# Ye, Wu :: Brigham and Women's Hospital
# Zaffino, Paolo :: Magna Graecia University of Catanzaro, Italy
# Zeleznik, Roman :: DFCI
# Zhang, Fan :: Brigham and Women's Hospital
# Zhang, Hongtao :: Hebei General Hospital
# Zhang, Miaomiao :: Massachusetts Institute of Technology
# Zhang, Yuqian :: Brigham and Women's Hospital
# Zhou, Haoyin :: Brigham and Women's Hospital
# Ziegler, Erik :: Open Health Imaging Foundation/Mass General Hospital

2017 Tutorial Contest

2017-01-12T17:23:48Z

Bpaniagua: /* Tutorials */

[[2017_Winter_Project_Week#Agenda|Back to Winter project week Agenda]]
==Introduction==
[http://www.slicer.org Slicer4.6] is used to perform meaningful research tasks. As part of the 3D Slicer Training activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Winter 2017 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer. The contest provides members of the medical image computing and radiology research community a methodology and a framework for developing step-by-step tutorials on advanced image analysis methods. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform, and to enhance training of Slicer4 functionality for their own laboratory groups.

==Organizer==
Sonia Pujol, Ph.D., Director of Training, Neuroimage Analysis Center, Brigham and Women's Hospital, Harvard Medical School

==Categories==
*Category 1 (*new*): '''DEMONSTRATION'''. This category allows new comers to the Slicer community to provide short demos based on slides and/or videos of their application.
*Category 2: '''ALGORITHM TUTORIAL'''. In this category the tutorial will teach a user how to make an algorithm work on their data.
*Category 3: '''EXTENSION TUTORIAL'''. In this category, the tutorial will teach a user how to use an Extension of Slicer.
*Category 4: '''END TO END SOLUTION TUTORIAL'''. In this category, the tutorial will teach a user how to solve a particular clinical problem using a workflow implemented in Slicer.
*Category 5: '''TUTORIAL UPGRADE/UPDATE"'. This category allows teams who participated in the past tutorial contest editions to submit an update/upgrade of their previous submission.

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sample dataset

=Rules=
The evaluation criteria for the 2017 tutorial contest are below:
*Tutorial must be based on the Slicer 4.6 release version of the software.
*To enter the contest, you must provide 'a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2016.ppt‎ | Winter 2017 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules 

=Submission Process=
''' Submission dead-line: Wednesday January 11, 2017'''
* To enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides/demos and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestWinter2017.pdf' and 'TutorialData_TutorialContestWinter2017.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Winter_2017_Contest_Table Winter 2017 test table ] on your tutorial page, and document the status of your cross-platform testing (Mac, Windows, Linux).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

=Tutorials=
*Simple Python Tool for Quality Control of DWI data (Laurent Chauvin)
*[https://www.nitrc.org/docman/view.php/308/1982/SPHARM-PDM_Tutorial_July2015.pdf SPHARM-PDM (Beatriz Paniagua)]
*Segmentation Module (Csaba Pinter)
*[[Media:ROSIGTLTutorial_Tokuda_Jan2017.pptx| Integration of Robot Operating System (ROS) and 3D Slicer using OpenIGTLink (Junichi Tokuda)]]
*Slicer Pathology (Erich Bremer)
*[[Media:Fiber_Bundle_Volume_Measurement.pptx|Fiber Bundle Volume Measurement]], [[Media:FiberVolume_data.zip| tutorial data]] (Shun Gong)

= Review Session=
The review session of the 2017 Tutorial Contest will take place on Thursday January 12 at the Massachusetts Institute of Technology, Cambrigde, MA as part of the Winter 2017 Slicer Project Week.
All contestants will be invited to present brief highlights of their tutorials. Each presentation should be 5-minute summary of the submission.
*Judges:
**Rebekka Lauer, Humboldt-University, Berlin
**Parvin Mousavi, Brigham and Women's Hospital
**Peter Anderson

=Results=
The winner of the 2017 tutorial contest will be announced on Friday January 13 during the closing session of the Slicer Project Week.

2017 Winter Project Week/SlicerShape

2017-01-12T17:23:31Z

Bpaniagua:

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
File:SALT_SoftwareWorkflow_Paniagua2017.jpg
File:SALT_DataImporter_Paniagua2017.jpg
File:SlicerSALT_Dashboards.png

</gallery>

==Key Investigators==

* Beatriz Paniagua (Kitware, Inc.)
* Johan Andruejol (Kitware, Inc.)
* JC Fillon-Robin (Kitware, Inc.)
* James Fishbaugh (NYU)
* Priscille de Dumast (UofM)

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* SALT Shape AnaLysis Toolbox, will be a comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. SALT will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
* SALT will be a packaged as a customized version of Slicer, but all different functional units of SALT will be disseminated as extensions as well and will contribute back to the platform.
* The main objective of this project will be touching base with the Slicer community and making sure our efforts are synergetic for other Slicer researchers.
|

* We will have a breakout session 9am on Wednesday to talk about the different shape functionalities of Slicer, and how Slicer can help SALT and how SALT can help the platform. Come join us!!
* I would like to continue some discussions on how the customized versions of Slicer and Slicer co-exist. During Project Week 2016, there were discussions on how the new website was going to be and how the different Slicer eco-systems were going to be acknowledged, I wonder what happened with that. I would like to identify some key players and make a decision.
* I will get started developing the dissemination infrastructure and dashboards during the week
* I will get started developing a customized version of Slicer for SALT.
|

* Dashboard created.
|}

==Background and References==


==Breakout session notes==
[https://docs.google.com/presentation/d/1CbddFklbMS-96CF0XJMZCA9o0MwXh2neo6fc-C6Ia7E/edit?usp=sharing Slides]

* Slicer.org bridging with all Slicer customizations available
** We will need to change infrastructure of slicer.org to acknowledge all the different customized versions of the program. Bea will give this a go.
** Tutorials, forums, mailinlists should be included there.

* Architectural design decisions
** Improving support for vtkMRMLModelNode.
*** Visualization - Color maps, Surface pre-processing algorithms
*** Support for 4D support - Sequences
** New vtkMRML*Node classes
** S-reps

* Improving user experience
** Providing a lot of feedback to the user
*** Quality of inputs and outputs
*** Speed, computation time
**** Obtain some sort of benchmarks of computational performance based on the OS requirements. kwsyslibrary can provide information of the program running. Another idea is to run a small subset of the batch processing and provide some information of how much did it take and how much the rest of the computation is going to take.
**** The user's frustration comes from the unexpected time delay when you run a method (expecting 1 min, waiting 1 h) Slicer has progress bars (Andras Lasso) is saying progress bar have phases and we should use it. They have a preview for parameter tuning and then they run the long method (preview on small data)
**** Running in separate process is good because you can kill the process anytime

* Thinking about the specific needs of the user base of slicerSALT
** These methods take a lot of time to compute and usually involve a batch process
*** Greg Sharp SlicerRT has a stand-alone tool that submits and logs jobs into Slicer
*** Ron Kikinis' input is that Slicer is not really designed for not interactive things, but you can have non-interactive mode and run things
*** Girder has ways to submit jobs and save outputs into it (Breakout session tomorrow)

2017 Winter Project Week/SlicerShape

2017-01-11T16:57:23Z

Bpaniagua: /* Breakout session notes */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]
File:SALT_SoftwareWorkflow_Paniagua2017.jpg
File:SALT_DataImporter_Paniagua2017.jpg
File:SlicerSALT_Dashboards.png

</gallery>

==Key Investigators==

* Beatriz Paniagua (Kitware, Inc.)
* Johan Andruejol (Kitware, Inc.)
* JC Fillon-Robin (Kitware, Inc.)
* James Fishbaugh (NYU)
* Priscille de Dumast (UofM)

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* SALT Shape AnaLysis Toolbox, will be a comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. SALT will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
* SALT will be a packaged as a customized version of Slicer, but all different functional units of SALT will be disseminated as extensions as well and will contribute back to the platform.
* The main objective of this project will be touching base with the Slicer community and making sure our efforts are synergetic for other Slicer researchers.
|

* We will have a breakout session 9am on Wednesday to talk about the different shape functionalities of Slicer, and how Slicer can help SALT and how SALT can help the platform. Come join us!!
* I would like to continue some discussions on how the customized versions of Slicer and Slicer co-exist. During Project Week 2016, there were discussions on how the new website was going to be and how the different Slicer eco-systems were going to be acknowledged, I wonder what happened with that. I would like to identify some key players and make a decision.
* I will get started developing the dissemination infrastructure and dashboards during the week
* I will get started developing a customized version of Slicer for SALT.
|

* Dashboard created.
|}

==Background and References==


==Breakout session notes==
[https://docs.google.com/presentation/d/1CbddFklbMS-96CF0XJMZCA9o0MwXh2neo6fc-C6Ia7E/edit?usp=sharing Slides]

==Breakout session notes==
[https://docs.google.com/presentation/d/1CbddFklbMS-96CF0XJMZCA9o0MwXh2neo6fc-C6Ia7E/edit?usp=sharing Slides]

* Slicer.org bridging with all Slicer customizations available
** We will need to change infrastructure of slicer.org to acknowledge all the different customized versions of the program. Bea will give this a go.
** Tutorials, forums, mailinlists should be included there.

* Architectural design decisions
** Improving support for vtkMRMLModelNode.
*** Visualization - Color maps, Surface pre-processing algorithms
*** Support for 4D support - Sequences
** New vtkMRML*Node classes
** S-reps

* Improving user experience
** Providing a lot of feedback to the user
*** Quality of inputs and outputs
*** Speed, computation time
**** Obtain some sort of benchmarks of computational performance based on the OS requirements. kwsyslibrary can provide information of the program running. Another idea is to run a small subset of the batch processing and provide some information of how much did it take and how much the rest of the computation is going to take.
**** The user's frustration comes from the unexpected time delay when you run a method (expecting 1 min, waiting 1 h) Slicer has progress bars (Andras Lasso) is saying progress bar have phases and we should use it. They have a preview for parameter tuning and then they run the long method (preview on small data)
**** Running in separate process is good because you can kill the process anytime

* Thinking about the specific needs of the user base of slicerSALT
** These methods take a lot of time to compute and usually involve a batch process
*** Greg Sharp SlicerRT has a stand-alone tool that submits and logs jobs into Slicer
*** Ron Kikinis' input is that Slicer is not really designed for not interactive things, but you can have non-interactive mode and run things
*** Girder has ways to submit jobs and save outputs into it (Breakout session tomorrow)

2017 Winter Project Week/SlicerShape

2017-01-11T02:59:44Z

Bpaniagua:

2017 Winter Project Week/SlicerShape

2017-01-11T02:56:31Z

Bpaniagua: /* Key Investigators */

2017 Winter Project Week/MandibularRegression

2017-01-10T21:10:46Z

Bpaniagua:

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]

</gallery>

==Key Investigators==
* James Fishbaugh NYU
* Beatriz Paniagua Kitware Inc
* Lucia Cevidanes UofM
* Guido Gerig NYU
* Tung Nguyen UNC
* Clement Mirabel UofM
* Priscille de Dumast UofM
* Daniella Garib Bauru University

==Background and References==
Running shape regression on maxillary casts and mandibular shapes.

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Continue the work from [https://www.na-mic.org/Wiki/index.php/2014_Winter_Project_Week:4DShape_Analysis_of_mandibular_changes Winter Project Week 2014]
* Add some more subjects to the study
* Prepare publication in IADR 2017
|

* Meet with James about this project and its context within Slicer
** Visualization of 4D results in Slicer
|

*
|}

==Background and References==

2017 Winter Project Week/MandibularRegression

2017-01-10T21:07:29Z

Bpaniagua: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]

</gallery>

==Key Investigators==
* James Fishbaugh NYU
* Beatriz Paniagua Kitware Inc
* Lucia Cevidanes UofM
* Guido Gerig NYU
* Tung Nguyen UNC
* Clement Mirabel UofM
* Priscille de Dumast UofM

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Continue the work from [https://www.na-mic.org/Wiki/index.php/2014_Winter_Project_Week:4DShape_Analysis_of_mandibular_changes Winter Project Week 2014]
* Add some more subjects to the study
* Prepare publication in IADR 2017
|

* Meet with James about this project and its context within Slicer
** Visualization of 4D results in Slicer
|

*
|}

==Background and References==

2017 Winter Project Week/SlicerShape

2017-01-10T18:42:47Z

Bpaniagua: /* Project Description */

2017 Winter Project Week/SlicerShape

2017-01-10T18:42:21Z

Bpaniagua:

File:SlicerSALT Dashboards.png

2017-01-10T18:41:26Z

Bpaniagua:

2017 Winter Project Week/SegWithSubtractionAndModel

2017-01-09T21:36:31Z

Bpaniagua: /* Background and References */

__NOTOC__
<gallery>
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|
Image:ModelScreenshot.PNG|[[2017_Winter_Project_Week#Projects|Projects List]]

[[File:ModelScreenshot.PNG]]
</gallery>

==Key Investigators==
* Andrew Beers, MGH
* Jayashree Kalpathy-Cramer, MGH
*Alexis G (Kitware)
*Csaba Pinter

==Project Description==
{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* In spite of recent advances in automatic segmentation technologies, manual segmentation is still often needed to either correct errors in the automatic segmentation or to achieve higher standard of segmentation accuracy. However, manual segmentation will become increasingly difficult as scan resolution and thus the number of slices to annotate increases. We are developing a module that takes advantage of subtraction maps and automatically-formed 3D ROIs to make accurate and efficient annotations in high resolution spaces.
|

* Confer with others to create convenient 3D visualizations of user-created ROIs, fix UI/UX bugs, integrate with the existing Editor and Segmentations Editor, and package and release as a functioning module.
|

*
|}

==Background and References==

https://www.researchgate.net/publication/307942551_nD_morphological_contour_interpolation (just in case that helps - Bea)

2017 Winter Project Week/Dinner

2017-01-06T18:24:10Z

Bpaniagua: /* RSVPs */

==Dinner Specs==

*Date and Time: Thursday, January 12, 6pm
*Location: Desi Dhaba, 401 Massachusetts Ave, Cambridge (about 10 minute walk from MIT)
*Food: Indian. (Veg and non-veg options, naan, rice)
*Cost: (TBD, last year was $25) - CASH ONLY! To be given to Katie Mastrogiacomo (kmast@bwh) during the week. She will provide receipts.
*Drinks: tap water is included in this price. Beyond that each person pays individually for their drinks.

==RSVPs==

#Curt Lisle
#Tina Kapur
# Andrey Fedorov
# Csaba Pinter
# Simon Drouin
# Alireza Mehrtash
# Henrik G. Jensen
# Beatriz Paniagua
# Beatriz Paniagua's +1

2017 Winter Project Week/Dinner

2017-01-06T18:23:54Z

Bpaniagua: /* RSVPs */