https://www.na-mic.org/w/api.php?action=feedcontributions&feedformat=atom&user=KikinisNAMIC Wiki - User contributions [en]2026-04-04T09:39:18ZUser contributionsMediaWiki 1.33.0https://www.na-mic.org/w/index.php?title=Project_Week_30&diff=98339Project Week 302018-08-29T12:55:36Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
Back to [[Events]]<br />
<br />
A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].<br />
<br />
[[image:PW30.png|300px]]<br />
<br />
=Welcome to the web page for the 30th Project Week!=<br />
<br />
<br />
It is a pleasure to announce that the 30th Project week will be held on January 28-February 1, 2019 in Las Palmas, Gran Canaria. <br />
<br />
This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.<br />
<br />
Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].<br />
<br />
===Local Organizing Committee===<br />
<br />
<br />
==Logistics==<br />
*'''Dates:''' January 28-February 1, 2019. <br />
*'''Location:''' Las Palmas, Gran Canaria<br />
*'''Registration:''' <br />
*'''Registration Fee:''' <br />
<br />
=Projects=<br />
<br />
=Registrants=<br />
<br />
Do not add your name to this list - it is maintained by the organizers based on your paid registration.</div>Kikinishttps://www.na-mic.org/w/index.php?title=Project_Events&diff=98338Project Events2018-08-29T12:51:15Z<p>Kikinis: /* Upcoming Project Weeks */</p>
<hr />
<div>__NOTOC__<br />
= Introduction =<br />
<br />
{| style="width:800px"<br />
| [[Image:2016 Winter Project Week Final Day.JPG|left|800px|Participants in the 2015 winter Project Week.]]<br />
|-<br />
| style="text-align: center; color: #3366ff;"|'''[[2016_Winter_Project_Week|Participants at the 2016 Winter Event]]'''<br />
|-<br />
| <br />
|-<br />
|<br />
|-<br />
|'''What?''' The Project Week is a week-long hands on activity in which medical image computing researchers create solutions using the open source image computing platform, [http://www.slicer.org 3D Slicer], and [http://www.vtk.org VTK], [http://www.itk.org ITK], and [http://www.cmake.org CMake] libraries. Participants work collaboratively on solutions that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conferences and workshops where the primary focus is to report results, the objective of the Project Week is to provide a venue for creators of medical image computing open-source software creators to collaboratively work.<br />
<br />
'''When, where, how much?''' Twice a year - June in Europe, and January at MIT. Ad-hoc meetings are added occasionally. The registration fee is approximately 350 (USD or Euro), and is used to cover coffee and food.<br />
<br />
'''How does it work?''' Weekly videoconferences for preparation begin 8-12 weeks before an event. Potential participants propose projects during these meetings, and collaboratively create a list of projects that are of mutual interest. The projects include platform work, algorithm development, and biomedical applications. Through the course of the meetings, each participant selects one or more project teams and develops goals for the week. The first day of the Project Week itself begins with a 2-hour in-person introduction to all projects and participants. The rest of the week consists of a mix of working sessions and breakout sessions on special topics, as decided by the participants during the preparatory meetings. <br />
<br />
'''Who can attend?''' Project Weeks are open to all and publicly advertised. One-day participation is permitted for first-time attendees, but rest stay for the entire event. Email announcements are sent to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week Project Week mailing list].<br />
<br />
'''Who should attend?''' This is harder to determine. Your best bet is to send an email (see below) or attend a preparatory videoconference. <br />
<br />
'''What else?''' The Project Week series was founded in 2005, along with the [https://wiki.na-mic.org/ National Alliance for Medical Image Computing (NA-MIC)], which was chartered by the NIH to build a computational infrastructure for biomedical research. Today, Project Week has become one of the major events in the calendars of several NIH-funded Center efforts. Participants in Project Week include [https://projects.iq.harvard.edu/nac NAC], [http://ncigt.org NCIGT], [http://qiicr.org/ QIICR], and [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process OCAIRO]. As of 2014, Project Week is also a MICCAI endorsed event.<br />
<br />
'''Who to contact?''' Project Weeks are led by [http://mailto:tkapur@bwh.harvard.edu Tina Kapur, PhD], who is happy to tell you more about them.<br />
|}<br />
<br />
__NOTOC__<br />
=Upcoming Project Weeks=<br />
<br />
<br />
<br />
{|<br />
|| [[Image:PW30.png|thumb|left|200px|]]<br />
| style="width:90%" |<br />
<br />
=== [https://na-mic.org/wiki/Project_Week_30 2019 January: Project Event 30]===<br />
The '''30th Project Event''' will be held on January 28-February1, 2019 in Las Palmas, Gran Canaria.<br />
|}<br />
<br />
----<br />
<br />
=Past Project Weeks=<br />
{|<br />
|| [[Image:MitralValveSegmenter.png|thumb|left|200px|[https://na-mic.github.io/ProjectWeek/PW29_2018_London_Canada/Projects/SlicerMitralValve/ Mitral Valve Modelling]]]<br />
| style="width:90%" |<br />
<br />
=== [https://na-mic.org/wiki/Project_Week_29 2018 July: Project Event 29]===<br />
The '''29th Project Event''' was held on July 16-20, 2018 at the Robarts Research Institute, London, ON, Canada. [https://na-mic.org/wiki/Project_Week_29 More...]<br />
|}<br />
<br />
{|<br />
|| [[Image:SegmentEditor_WholeHeart.PNG|thumb|left|200px|[https://na-mic.github.io/ProjectWeek/PW28_2018_GranCanaria/Projects/SegmentEditor/ Segment Editor Clinical Workflows]]]<br />
| style="width:90%" |<br />
<br />
=== [https://na-mic.github.io/ProjectWeek/PW28_2018_GranCanaria 2018 June: Project Event 28]===<br />
The '''28th Project Event''' was held on June 25-29, 2018 at Gran Canaria, Spain. [https://na-mic.github.io/ProjectWeek/PW28_2018_GranCanaria More...]<br />
|}<br />
<br />
{|<br />
|| [[Image:ShapeRegressionExtension_UI.png|thumb|left|200px|[https://na-mic.github.io/ProjectWeek/PW27_2018_Boston/Projects/SlicerSALT/ SlicerSALT Shape Analysis Toolbox]]]<br />
| style="width:90%" |<br />
<br />
=== [https://na-mic.github.io/ProjectWeek/PW27_2018_Boston 2018 January: Project Event 27]===<br />
The '''27th Project Event''' was held on January 8-12, 2018 at MIT. It recorded 72 registered attendees, who worked on 53 projects. [https://na-mic.github.io/ProjectWeek/PW27_2018_Boston More...]<br />
|}<br />
<br />
{|<br />
|| [[Image:SPWW_Summer2017-example.jpg|thumb|left|200px|[http://wiki.imaging.robarts.ca/index.php/2017_Slicer_Western_Week/Laplace_equation_solver Example Project: Laplace Equation Solver]]]<br />
| style="width:90%" |<br />
<br />
=== [http://wiki.imaging.robarts.ca 2017 July: Project Event 26]===<br />
The '''26th Project Event''' was held on July 17-21, 2017, at the Robarts Research Institute, London, ON, Canada. [http://wiki.imaging.robarts.ca/ More...]<br />
|}<br />
<br />
{|<br />
|-<br />
|[[Image:YeB_atlas_segmentation.jpg|thumb|left|200px|[[Project_Week_25/Surgical_Planning_In_Stereotaxy |Example Project: Surgical Planning In Stereotaxy]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2017_Summer_Project_Week|2017 June: Project Event 25]]===<br />
The '''25th Project Event''' was held on June 26-30, 2017, Catanzaro Lido, Calabria, Italy. It recorded 51 registered attendees, who worked on 29 projects. [[2017_Summer_Project_Week|More...]]<br />
|}<br />
<br />
{|<br />
|-<br />
|| [[Image:Needles_winter_project_week_2017.png|thumb|left|200px|[[2017_Winter_Project_Week/Needle_Segmentation_from_MRI |Example Project: Needle Segmentation from MRI]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2017_Winter_Project_Week|2017 January: Project Event 24]]===<br />
The '''24th Project Event''' was held on January 9-13, 2017, MIT, Cambridge, MA. It recorded 99 registered attendees, who worked on 55 projects. [[2017_Winter_Project_Week| More...]]<br />
|}<br />
<br />
{|<br />
|-<br />
|| [[Image:Brainstem contours 3D.png|thumb|left|200px|[[2016_Summer_Project_Week/Brain_atlas_combining_histology_and_MRI|Example Project: Brain atlas combining histology and MRI]]]]<br />
| style="width:90%" |<br />
=== [[2016_Summer_Project_Week|2016 June: Project Event 23]]===<br />
The '''23rd Project Event''' was held on June 20-25, 2016, with one day break on June 21st for IPCAI, Heidelberg, Germany. It recorded 58 registered attendees, who worked on 32 projects. [[2016_Summer_Project_Week|More...]]<br />
|}<br />
<br />
{|<br />
|-<br />
|| [[Image:2016_Winter_Project_Week_Final_Day.JPG|thumb|left|200px|]]<br />
| style="width:90%" |<br />
=== [[2016_Winter_Project_Week|2016 January: Project Event 22]]===<br />
The '''22th Project Event''' was held on January 4-8, 2016, MIT, Cambridge, MA. It recorded 77 registered attendees, who worked on 47 projects. These attendees represented 17 academic sites and 8 companies. [[2016_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:RegResults.png|thumb|left|200px|[[2015_Refinement_Registration_Module|Example Project: Refinement Registration]]]]<br />
| style="width:90%" |<br />
=== [[2015_Summer_Project_Week|2015 June: Project Event 21]]===<br />
The '''21st Project Event''' was held on June 21-24, in Barcelona, Spain. It recorded 55 registered attendees, who worked on 39 projects. These attendees represented 20 academic sites and 7 companies. [[2015_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:VR_RadiologyEnvironment.png|thumb|left|200px|[[VR_Radiology|Example Project: Virtual Reality Devices in Creating Environments for Diagnostic Radiology]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2015_Winter_Project_Week|2015 January: Project Event 20]]===<br />
The '''20th Project Event''' was held on January 5-9 in Salt Lake City, UT. t recorded 44 registered attendees, who worked on 42 projects. These attendees represented 11 academic sites and 4 companies. [[2015_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:Projectweek-2014-06-23-IMG_0837.JPG|thumb|left|200px|]]<br />
| style="width:90%" |<br />
=== [[2014_Summer_Project_Week|2014 June: Project Event 19]]===<br />
The '''19th Project Event''' was held on June 23-27 in Cambridge, MA. It recorded 81 registered attendees, who worked on 66 projects. These attendees represented 21 academic sites and 4 companies. [[2014_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:LAsegment_GraphCut.png|thumb|left|200px|[[2014_Project_Week:GraphCutsLASegmentationModule|Example Project: LA Segmentation Module using Multi-column Graph Cuts]]]]<br />
| style="width:90%" |<br />
=== [[2014_Winter_Project_Week|2014 January: Project Event 18]]===<br />
The '''18th Project Event''' was held on January 6-10 in Salt Lake City, UT, in conjunction with the [[AHM_2014|2014 NA-MIC AHM]]. It recorded 70 registered attendees, who worked on 66 projects. These attendees represented 13 academic sites and 4 companies. [[2014_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:HD01-i.png|thumb|left|200px|[[Linear_Mixed-effects_shape_model_to_explore_Huntington%27s_Disease_Data|Example Project: Linear Mixed-effects Shape Model to Explore Huntington's Disease Data]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2013_Summer_Project_Week|2013 June: Project Event 17]]===<br />
The '''17th Project Event''' was held on June 17-21 in Cambridge, MA. It recorded 104 registered attendees, who worked on 75 projects. These attendees represented 22 academic sites and 13 companies. [[2013_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:Diff_reg_TBI.png|thumb|left|200px|[[4D_DTI_tractography_in_Slicer_for_TBI|Example Project: Coregistration of Structural and Diffusion MRI towards 4D Modeling of TBI]]]]<br />
| style="width:90%" |<br />
=== [[AHM_2013|2013 January: Project Event 16]] ===<br />
The '''16th Project Event''' was held on January 7-11 in Salt Lake City, UT, in conjunction with the [[AHM_2013|2013 NA-MIC AHM]]. It recorded 80 registered attendees, who worked on 54 projects. These attendees represented 17 academic sites and 4 companies. [[AHM_2013|More...]]<br />
|-<br />
|| [[Image:Tracts_colored_by_distance_to_arcuate.png|thumb|left|200px|[[2012_Summer_Project_Week:Intraoperative_Tract_Detection|Example Project: Intraoperative Tract Detection]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2012_Summer_Project_Week|2012 June: Project Event 15]] ===<br />
The '''15th Project Event''' was held on June 18-22 in Cambridge, MA. It recorded 88 registered attendees, who worked on 62 projects. These attendees represented 20 academic sites and 8 companies. [[2012_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:AFibLongitudinalRegistration-PreOP-text.png|thumb|left|200px|[[2012_Winter_Project_Week:LAWallRegistration|Example Project: Longitudinal Alignment and Visualization of Left-Atrial Wall from DEMRI and MRA]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2012_Winter_Project_Week|2012 January: Project Event 14]] ===<br />
The '''14th Project Event''' was held on January 9-13 in Salt Lake City, UT, in conjunction with the [[AHM_2012|2012 NA-MIC AHM]]. It recorded 104 registered attendees, who worked on 57 projects. These attendees represented 19 academic sites and 6 companies. [[2012_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:PW-Boston-2011-group-photo-IMG_0144.JPG|thumb|left|200px]]<br />
| style="width:90%" |<br />
<br />
=== [[2011_Summer_Project_Week|2011 June: Project Event 13]] ===<br />
The '''13th Project Event''' was held on June 20-24 in Cambridge, MA. It recorded 104 registered attendees, who worked on 61 projects. These attendees represented 17 academic sites and 8 companies. [[2011_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:KSlice1.png|thumb|left|200px|[[2011_Winter_Project_Week:MeshCurvolver|Example Projects: Surface Region Segmentation for Surgical Planning and Mapping]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2011_Winter_Project_Week|2011 January: Project Event 12]] ===<br />
The '''12th Project Event''' was held on January 10-14 in Salt Lake City, UT, in conjunction with the [[AHM_2011|2011 NA-MIC AHM]]. It recorded 106 registered attendees, who worked on 59 projects. These attendees represented 20 academic sites and 9 companies. [[2011_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:2010_Summer_Project_Week_Group.JPG|thumb|left|200px|]]<br />
| style="width:90%" |<br />
<br />
=== [[2010_Summer_Project_Week|2010 June: Project Event 11]] ===<br />
The '''11th Project Event''' was held on June 21-25 in Cambridge, MA. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. [[2010_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:Dicom-rt-import.png|thumb|left|200px|[[2010_Winter_Project_Week_DicomRT_Plugin|Example Project: DicomRT Plugin for Slicer]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2010_Winter_Project_Week|2010 January: Project Event 10]] ===<br />
The '''SECOND JOINT Project Event''' (and the tenth PROJECT EVENT) was held on January 4-8 in Salt Lake City, UT, in conjunction with the [[AHM_2010|2010 NA-MIC AHM]]. It recorded 107 registered attendees, who worked on 49 projects. These attendees represented 22 academic sites and 6 companies. [[2010_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:2009_Project_Week_Group_Picture.jpg|thumb|left|200px|]]<br />
| style="width:90%" |<br />
<br />
=== [[2009_Summer_Project_Week|2009 June: Project Event 9]] ===<br />
The '''FIRST JOINT Project Event''' (and the ninth PROJECT EVENT) was held on June 22-26 in Cambridge, MA. It recorded 134 registered attendees, who worked on 62 projects. These attendees represented 31 academic sites and 9 companies. [[2009_Summer_Project_Week|More...]]<br />
|-<br />
|| [[Image:Arctic_Logo.png| thumb|left|200px|[[UNC_ARCTIC_Tutorial|ARCTIC Tutorial: Winner of the First Tutorial Contest!]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2009_Winter_Project_Week|2009 January: Project Event 8]] ===<br />
The eighth NA-MIC Project event was held on January 5-9 in Salt Lake City, UT, in conjunction with the [[AHM_2009|2009 NA-MIC AHM]]. The AHM recorded 92 total attendees. During the project event, 52 projects were actively pursued by the participants. [[2009_Winter_Project_Week|More...]]<br />
|-<br />
|| [[Image:2008MITDay4-016.jpg|thumb|left|200px|]]<br />
| style="width:90%" |<br />
<br />
=== [[2008_Summer_Project_Week|2008 June: Project Event 7]]===<br />
The seventh NA-MIC Project event was held on June 23-27 in Cambridge, MA. There were 114 registered participants for this meeting who worked on 58 projects. 14 of these projects were directly related to the NA-MIC DBPs, 19 to External Collaborations, and 15 to NA-MIC Infrastructure. [[2008_Summer_Project_Week| More...]]<br />
|-<br />
|| [[Image:VolumeRenderScene.png|thumb|left|200px|[[2008_Winter_Project_Week:OutOfCoreMRML| Example Project: MRML Support for Out of Core processing]]]]<br />
| style="width:90%" |<br />
=== [[2008_Winter_Project_Week|2008 January: Project Event 6]] ===<br />
The sixth NA-MIC Project event was held on January 7-11 in Salt Lake City, UT, in conjunction with the [[AHM_2008| 2008 NA-MIC AHM]]. The AHM recorded 104 total attendees. During the project event, 38 projects were actively pursued by the participants. [[2008_Winter_Project_Week|More...]]<br />
|-<br />
||[[Image:Mit.jpg|thumb|200px|left|<small>Picture of the event taken by Jeffrey Hawley</small>]]<br />
| style="width:90%" |<br />
<br />
=== [[2007_Programming/Project_Week_MIT|2007 June: Project Event 5]] ===<br />
The fifth NA-MIC Project event was concluded on June 29 in Cambridge, MA. This was the largest hands-on project event in the three year history of NA-MIC with 41 active projects and peak attendance of 90. Of the 85 registered attendees, 35 were NA-MIC participants, 48 external collaborators, and 2 representatives from the External Advisory Board and the NIH. The external collaborators were from 13 Institutions. [[2007_Programming/Project_Week_MIT|More...]]<br />
|-<br />
||[[Image:Stochastic_Tractography.jpg|thumb|200px|left|[[Projects:DTIStochasticTractography|Example Project: Stochastic Tractography]]]]<br />
| style="width:90%" |<br />
=== [[2007_Project_Half_Week|2007 January: Project Event 4]] ===<br />
This fourth NA-MIC project event was successfully concluded on January 12 in Salt Lake City, UT, in conjunction with the [[AHM_2007|2007 NA-MIC AHM]]. The AHM recorded 96 total attendees, 56 of whom were NA-MIC participants, 32 were collaborators, and 8 represented the EAB and the NIH. During the project event, 38 projects were actively pursued by the participants. [[2007_Project_Half_Week|More...]]<br />
|-<br />
||[[Image:False_Discovery_Rate_for_Shape_Analysis.jpg|thumb|200px|left|[[Projects:LocalStatisticalAnalysisViaPermutationTests|Example Project: False Discovery Rate for Shape Analysis]]]]<br />
| style="width:90%" |<br />
<br />
=== [[2006_Programming/Project_Week_MIT|2006 June: Project Event 3]] ===<br />
The third NA-MIC Project event was successfully concluded on June 30 in Cambridge, MA. It recorded 56 attendees, 38 of whom were NA-MIC participants and 18 were collaborators. During the project event, 22 projects were actively pursued by the participants. [[Engineering:2006_Project_Week_Results|More...]]<br />
|-<br />
||[[Image:DLPFC_Segmentation.jpg|thumb|200px|left|[[Projects:RuleBasedSegmentation|Example Project: Rule Based DLPFC Segmentation]]]]<br />
| style="width:90%" |<br />
<br />
=== [[Engineering:Programmers_Half_Week_Jan_2006|2006 January: Project Event 2]] ===<br />
The second NA-MIC project event was successfully concluded on January 13 in Salt Lake City, UT, in conjunction with the [[AHM_2006:AHM_2006|2006 NA-MIC AHM]]. The AHM recorded 85 total attendees, 52 of whom attended this event. During the project event, 24 projects were actively pursued by the participants. [[Engineering:Programmers_Half_Week_Jan_2006|More...]]<br />
|-<br />
||[[Image:Slicer_Architecture_Discussion_Group.jpg|thumb|200px|left|Slicer Re-architecture Discussion Group]]<br />
| style="width:90%" |<br />
<br />
=== [[Engineering:Programmers_Week_Summer_2005|2005 June: Project Event 1]] ===<br />
The first NA-MIC Programming Week was successfully concluded on July 1 in Cambridge, MA. It recorded 44 attendees who worked actively on 15 projects. [[Engineering:2005_Programming_Week_Results|More...]]<br />
|}</div>Kikinishttps://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/Next_project_week&diff=952332017 Winter Project Week/Next project week2017-01-26T15:36:15Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<gallery><br />
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]<br />
Image:Where is Catanzaro2017-01-13.png|Where is Catanzaro<br />
Image:Calabria-2017-01-13.png|Calabria is highlighted in the New York Time list of 52 places to travel in 2017. See [http://www.enjoyitaly.org/2017/01/13/calabria-is-one-of-the-new-york-times-52-places-to-go-in-2017/ here].<br />
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --><br />
</gallery><br />
<br />
==Key Investigators==<br />
<!-- Add a bulleted list of investigators and their institutions here --><br />
*Paolo Zaffino, Magna Graecia University of Catanzaro, Italy<br />
*Maria Francesca Spadea, Magna Graecia University of Catanzaro, Italy<br />
*Tina Kapur, BWH <br />
<br />
<br />
==Project Description==<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Present the next project week<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* https://docs.google.com/presentation/d/18wzI0ITHFEwRDOc_yMOnXBxn_ZNMLDSUYToIVvkWH20/pub?start=true&loop=false&delayms=15000<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --> [http://wiki.na-mic.org/Wiki/index.php/2017_Summer_Project_Week Webpage for the Summer Project Week]<br />
*<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --></div>Kikinishttps://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/Next_project_week&diff=952192017 Winter Project Week/Next project week2017-01-19T23:17:39Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<gallery><br />
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]<br />
Image:Where is Catanzaro2017-01-13.png|Where is Catanzaro<br />
Image:Calabria-2017-01-13.png|Calabria is highlighted in the New York Time list of 52 places to travel in 2017. See [http://www.enjoyitaly.org/2017/01/13/calabria-is-one-of-the-new-york-times-52-places-to-go-in-2017/ here].<br />
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --><br />
</gallery><br />
<br />
==Key Investigators==<br />
<!-- Add a bulleted list of investigators and their institutions here --><br />
*Paolo Zaffino, Magna Graecia University of Catanzaro, Italy<br />
*Maria Francesca Spadea, Magna Graecia University of Catanzaro, Italy<br />
*Tina Kapur, BWH <br />
<br />
<br />
==Project Description==<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Present the next project week<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* https://docs.google.com/presentation/d/18wzI0ITHFEwRDOc_yMOnXBxn_ZNMLDSUYToIVvkWH20/pub?start=true&loop=false&delayms=15000<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --><br />
*<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --></div>Kikinishttps://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/Organizations&diff=951802017 Winter Project Week/Organizations2017-01-13T19:26:23Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<gallery><br />
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]<br />
Image:Whiteboardoflife.jpg<br />
Image:Slicerverse_mockup.png<br />
Image:Example of a browserwide picture 2017-01-13.png|[http://www.nytimes.com/interactive/2016/10/24/world/asia/living-in-chinas-expanding-deserts.html?hp&action=click&pgtype=Homepage&clickSource=story-heading&module=photo-spot-region&region=top-news&WT.nav=top-news&_r=0 Example of a browserwide image]<br />
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --><br />
</gallery><br />
<br />
==Key Investigators==<br />
<!-- Add a bulleted list of investigators and their institutions here --><br />
* Beatriz Paniagua, Kitware<br />
* Lauren O'Donnell, BWH<br />
* Isaiah Norton, BWH<br />
* Fan Zhang, BWH<br />
* Gregory Sharp, MGH<br />
* Louise Oram, The Intervention Centre-Oslo University Hospital<br />
<br />
==Project Description==<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Increase visibility of Slicer* {Projects, Topics, Organizations, Flavors, Solutions} and their training material, webpages, etc., from slicer.org<br />
* Build community<br />
* Increase impact of slicer.org website by showing impressive Slicer* information<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* Meet and discuss<br />
* Initial mockup of landing page<br />
* Discussion of favorite quotes<br />
** Quality is the enemy of speed<br />
<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --><br />
* We crashed a CSAIL conference room and used their whiteboard to plot and plan Thursday<br />
* We drafted lists of the following:<br />
** REQUIREMENTS to be a Slicer Solution/Project/Organization <br />
*** open-source repo, specialized functionality, and live project with a contact person responsible for answering user questions<br />
** INFORMATION needed for inclusion on the proposed webpage<br />
*** very short description, icon, institute, Slicer* name, main webpage link, tutorials webpage link<br />
**Brainstorming for NAME of what these should be called<br />
*** Slicer Topics, Projects, Toolkits, Organizations, Bundles, Tools, Flavors, Environments, Solutions<br />
*** Tentative interest in Solutions<br />
* Made a mockup of slicer.org top-level page (see image)<br />
* Discussed including pointers to Slicer Solutions from the training page<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --></div>Kikinishttps://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/Organizations&diff=951792017 Winter Project Week/Organizations2017-01-13T19:25:37Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<gallery><br />
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]<br />
Image:Whiteboardoflife.jpg<br />
Image:Slicerverse_mockup.png<br />
Image:Example of a browserwide picture 2017-01-13.png|http://www.nytimes.com/interactive/2016/10/24/world/asia/living-in-chinas-expanding-deserts.html?hp&action=click&pgtype=Homepage&clickSource=story-heading&module=photo-spot-region&region=top-news&WT.nav=top-news&_r=0<br />
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --><br />
</gallery><br />
<br />
==Key Investigators==<br />
<!-- Add a bulleted list of investigators and their institutions here --><br />
* Beatriz Paniagua, Kitware<br />
* Lauren O'Donnell, BWH<br />
* Isaiah Norton, BWH<br />
* Fan Zhang, BWH<br />
* Gregory Sharp, MGH<br />
* Louise Oram, The Intervention Centre-Oslo University Hospital<br />
<br />
==Project Description==<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Increase visibility of Slicer* {Projects, Topics, Organizations, Flavors, Solutions} and their training material, webpages, etc., from slicer.org<br />
* Build community<br />
* Increase impact of slicer.org website by showing impressive Slicer* information<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* Meet and discuss<br />
* Initial mockup of landing page<br />
* Discussion of favorite quotes<br />
** Quality is the enemy of speed<br />
<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --><br />
* We crashed a CSAIL conference room and used their whiteboard to plot and plan Thursday<br />
* We drafted lists of the following:<br />
** REQUIREMENTS to be a Slicer Solution/Project/Organization <br />
*** open-source repo, specialized functionality, and live project with a contact person responsible for answering user questions<br />
** INFORMATION needed for inclusion on the proposed webpage<br />
*** very short description, icon, institute, Slicer* name, main webpage link, tutorials webpage link<br />
**Brainstorming for NAME of what these should be called<br />
*** Slicer Topics, Projects, Toolkits, Organizations, Bundles, Tools, Flavors, Environments, Solutions<br />
*** Tentative interest in Solutions<br />
* Made a mockup of slicer.org top-level page (see image)<br />
* Discussed including pointers to Slicer Solutions from the training page<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --></div>Kikinishttps://www.na-mic.org/w/index.php?title=File:Example_of_a_browserwide_picture_2017-01-13.png&diff=95178File:Example of a browserwide picture 2017-01-13.png2017-01-13T19:25:04Z<p>Kikinis: </p>
<hr />
<div></div>Kikinishttps://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/Next_project_week&diff=951772017 Winter Project Week/Next project week2017-01-13T19:20:06Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<gallery><br />
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]<br />
Image:Where is Catanzaro2017-01-13.png|Where is Catanzaro<br />
Image:Calabria-2017-01-13.png|Calabria is highlighted in the New York Time list of 52 places to travel in 2017<br />
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --><br />
</gallery><br />
<br />
==Key Investigators==<br />
<!-- Add a bulleted list of investigators and their institutions here --><br />
*Paolo Zaffino, Magna Graecia University of Catanzaro, Italy<br />
*Maria Francesca Spadea, Magna Graecia University of Catanzaro, Italy<br />
*Tina Kapur, BWH <br />
<br />
<br />
==Project Description==<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Present the next project week<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* https://docs.google.com/presentation/d/18wzI0ITHFEwRDOc_yMOnXBxn_ZNMLDSUYToIVvkWH20/pub?start=true&loop=false&delayms=15000<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --><br />
*<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --></div>Kikinishttps://www.na-mic.org/w/index.php?title=File:Where_is_Catanzaro2017-01-13.png&diff=95176File:Where is Catanzaro2017-01-13.png2017-01-13T19:19:21Z<p>Kikinis: </p>
<hr />
<div></div>Kikinishttps://www.na-mic.org/w/index.php?title=2017_Winter_Project_Week/Next_project_week&diff=951752017 Winter Project Week/Next project week2017-01-13T19:09:35Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<gallery><br />
Image:PW-Winter2017.png|link=2017_Winter_Project_Week#Projects|[[2017_Winter_Project_Week#Projects|Projects List]]<br />
Image:Calabria-2017-01-13.png|Calabria is highlighted in the New York Time list of 52 places to travel in 2017<br />
<!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" --><br />
</gallery><br />
<br />
==Key Investigators==<br />
<!-- Add a bulleted list of investigators and their institutions here --><br />
*Paolo Zaffino, Magna Graecia University of Catanzaro, Italy<br />
*Maria Francesca Spadea, Magna Graecia University of Catanzaro, Italy<br />
*Tina Kapur, BWH <br />
<br />
<br />
==Project Description==<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Present the next project week<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* https://docs.google.com/presentation/d/18wzI0ITHFEwRDOc_yMOnXBxn_ZNMLDSUYToIVvkWH20/pub?start=true&loop=false&delayms=15000<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --><br />
*<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --></div>Kikinishttps://www.na-mic.org/w/index.php?title=File:Calabria-2017-01-13.png&diff=95174File:Calabria-2017-01-13.png2017-01-13T19:07:30Z<p>Kikinis: </p>
<hr />
<div></div>Kikinishttps://www.na-mic.org/w/index.php?title=Historic-Links&diff=93634Historic-Links2016-10-25T06:54:21Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
== [[NA-MIC_Collaborations|NA-MIC Collaborations]] ==<br />
* A list of our internal and external collaborative projects.<br />
<br />
== [[NIH-Page|NIH Page]] ==<br />
* This page contains useful information provided by our NIH officers.<br />
<br />
== [[Mbirn:Main_Page|Morphometry BIRN Page (to Wiki pages)]] ==<br />
* This page contains information about the [http://www.nbirn.net Morphometry Biomedical Informatics Research Network (to web pages)] Project, a close NA-MIC collaboration.<br />
<br />
==[[FBIRN:Main_Page|Function BIRN Page]] ==<br />
* This page contains information about the Function Biomedical Informatics Research Network Project, a close NA-MIC collaboration and one of the [http://www.nbirn.net BIRN] testbeds. <br />
* In 2006, fBRIN moved to a BIRN hosted [http://132.239.132.249:8080/xwiki/bin/view/Function-BIRN/Home wiki].<br />
<br />
==[http://www.loni.ucla.edu/twiki/bin/view/MouseBIRN/WebHome Mouse BIRN Wiki] ==<br />
* This page contains information about the [http://www.nbirn.net Mouse Biomedical Informatics Research Network (to web pages)] Project, a BIRN testbed examining mouse models of neurodegenerative disease.<br />
<br />
==[[NAC:Main_Page|Neuroimage Analysis Center (to Wiki pages)]] ==<br />
* This page contains information about the Neuroimage Analysis Center (NAC) Project.<br />
<br />
== [[NCIGT:Main_Page|NCIGT - National Center for Image-Guided Therapy]] ==<br />
* This page contains information about the [http://www.ncigt.org National Center for Image-Guided Therapy] Project, a close NA-MIC collaboration.<br />
* [http://wiki.na-mic.org/Wiki/index.php/Slicer-IGT This page] contains information about '''Slicer for IGT''' co-sponsored by NCIGT and NA-MIC.<br />
<br />
== [[CIMIT:Main_Page|CIMIT (to Wiki pages)]] ==<br />
* This page contains information about CIMIT.<br />
<br />
== [[Collaboration:Harvard CTSC| Harvard CTSC Translational Technologies Imaging Consortium Workspace]] ==<br />
* This page contains information about the Harvard CTSC<br />
<br />
== [[Collaboration:MR Wiki| MR Wiki]] ==<br />
* This page contains notes brainstorming about an MR wiki</div>Kikinishttps://www.na-mic.org/w/index.php?title=Main_Page&diff=93633Main Page2016-10-25T06:53:37Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
= Welcome =<br />
<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| [[Image:NIH_Logo.png|[[Image:NIH_Logo.png|Image:NIH_Logo.png]]]][[Image:Dhhs_logo.png|[[Image:Dhhs_logo.png|Image:Dhhs_logo.png]]]]<br />
<br />
These wiki pages are meant to encourage quick and efficient communication among the participating investigators and the interested users of NA-MIC, the National Alliance for Medical Imaging Computing. <br />
<br />
NA-MIC is a multi-institutional, interdisciplinary team of computer scientists, software engineers, and medical investigators who develop computational tools for the analysis and visualization of medical image data. The purpose of the Center is to provide the infrastructure and environment for the development of computational algorithms and open-source technologies, and then oversee the training and dissemination of these tools to the medical research community.<br />
<br />
NA-MIC was a national research center supported by grant U54 EB005149 from the NIBIB NIH HHS. NA-MIC itself is no longer a funded research effort, but many research projects driven by NA-MIC technologies continue.<br />
<br />
To get an idea of the ongoing activities in this project, follow the links in the Navigation box on the left side of this page: Cores and Projects contains information about the activities in the individual NA-MIC cores as well as cross-NCBC activities, the Events pages contains information about upcoming and past NA-MIC events including teleconferences, and the Resources pages contain information about NA-MIC software.<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Slicer4Announcement-HiRes.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Slicer 4.5 released in November 2015. See the [http://www.slicer.org/slicerWiki/index.php/Documentation/4.5/Announcements Announcement] for more information.<br />
|}<br />
== Resources at a glance ==<br />
* '''[[Events|Events]]''': A list of all our past and upcoming events.<br />
* '''[[NA-MIC-Kit|NA-MIC Kit]]''': The NA-MIC Kit consists of software and software engineering methods that are used and developed by NA-MIC, including [http://www.slicer.org 3D Slicer]. <br />
* '''[[Project_Events|NA-MIC Project Week]]''': NA-MIC Project Week is a hands on activity -- open source programming using the 3D Slicer framework for clinical applications. The link above leads to results from project weeks held since 2005.<br />
* '''[[Call_for_Medical_Image_Computing_Grant_Applications|Call for Medical Image Computing Grant Applications]]''': This is a call to help us improve the review process for Medical Image Computing grant applications by NIH.<br />
* '''[[Historic-Links|Other Links]]'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=Historic-Links&diff=93632Historic-Links2016-10-25T06:52:46Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
== [[NIH-Page|NIH Page]] ==<br />
* This page contains useful information provided by our NIH officers.<br />
<br />
== [[Mbirn:Main_Page|Morphometry BIRN Page (to Wiki pages)]] ==<br />
* This page contains information about the [http://www.nbirn.net Morphometry Biomedical Informatics Research Network (to web pages)] Project, a close NA-MIC collaboration.<br />
<br />
==[[FBIRN:Main_Page|Function BIRN Page]] ==<br />
* This page contains information about the Function Biomedical Informatics Research Network Project, a close NA-MIC collaboration and one of the [http://www.nbirn.net BIRN] testbeds. <br />
* In 2006, fBRIN moved to a BIRN hosted [http://132.239.132.249:8080/xwiki/bin/view/Function-BIRN/Home wiki].<br />
<br />
==[http://www.loni.ucla.edu/twiki/bin/view/MouseBIRN/WebHome Mouse BIRN Wiki] ==<br />
* This page contains information about the [http://www.nbirn.net Mouse Biomedical Informatics Research Network (to web pages)] Project, a BIRN testbed examining mouse models of neurodegenerative disease.<br />
<br />
==[[NAC:Main_Page|Neuroimage Analysis Center (to Wiki pages)]] ==<br />
* This page contains information about the Neuroimage Analysis Center (NAC) Project.<br />
<br />
== [[NCIGT:Main_Page|NCIGT - National Center for Image-Guided Therapy]] ==<br />
* This page contains information about the [http://www.ncigt.org National Center for Image-Guided Therapy] Project, a close NA-MIC collaboration.<br />
* [http://wiki.na-mic.org/Wiki/index.php/Slicer-IGT This page] contains information about '''Slicer for IGT''' co-sponsored by NCIGT and NA-MIC.<br />
<br />
== [[CIMIT:Main_Page|CIMIT (to Wiki pages)]] ==<br />
* This page contains information about CIMIT.<br />
<br />
== [[Collaboration:Harvard CTSC| Harvard CTSC Translational Technologies Imaging Consortium Workspace]] ==<br />
* This page contains information about the Harvard CTSC<br />
<br />
== [[Collaboration:MR Wiki| MR Wiki]] ==<br />
* This page contains notes brainstorming about an MR wiki</div>Kikinishttps://www.na-mic.org/w/index.php?title=Main_Page&diff=93631Main Page2016-10-25T06:51:52Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
= Welcome =<br />
<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| [[Image:NIH_Logo.png|[[Image:NIH_Logo.png|Image:NIH_Logo.png]]]][[Image:Dhhs_logo.png|[[Image:Dhhs_logo.png|Image:Dhhs_logo.png]]]]<br />
<br />
These wiki pages are meant to encourage quick and efficient communication among the participating investigators and the interested users of NA-MIC, the National Alliance for Medical Imaging Computing. <br />
<br />
NA-MIC is a multi-institutional, interdisciplinary team of computer scientists, software engineers, and medical investigators who develop computational tools for the analysis and visualization of medical image data. The purpose of the Center is to provide the infrastructure and environment for the development of computational algorithms and open-source technologies, and then oversee the training and dissemination of these tools to the medical research community.<br />
<br />
NA-MIC was a national research center supported by grant U54 EB005149 from the NIBIB NIH HHS. NA-MIC itself is no longer a funded research effort, but many research projects driven by NA-MIC technologies continue.<br />
<br />
To get an idea of the ongoing activities in this project, follow the links in the Navigation box on the left side of this page: Cores and Projects contains information about the activities in the individual NA-MIC cores as well as cross-NCBC activities, the Events pages contains information about upcoming and past NA-MIC events including teleconferences, and the Resources pages contain information about NA-MIC software.<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Slicer4Announcement-HiRes.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Slicer 4.5 released in November 2015. See the [http://www.slicer.org/slicerWiki/index.php/Documentation/4.5/Announcements Announcement] for more information.<br />
|}<br />
== Resources at a glance ==<br />
* '''[[Events|Events]]''': A list of all our past and upcoming events.<br />
* '''[[NA-MIC_Collaborations|NA-MIC Collaborations]]''': A list of our internal and external collaborative projects.<br />
* '''[[NA-MIC-Kit|NA-MIC Kit]]''': The NA-MIC Kit consists of software and software engineering methods that are used and developed by NA-MIC, including [http://www.slicer.org 3D Slicer]. <br />
* '''[[Project_Events|NA-MIC Project Week]]''': NA-MIC Project Week is a hands on activity -- open source programming using the 3D Slicer framework for clinical applications. The link above leads to results from project weeks held since 2005.<br />
* '''[[Call_for_Medical_Image_Computing_Grant_Applications|Call for Medical Image Computing Grant Applications]]''': This is a call to help us improve the review process for Medical Image Computing grant applications by NIH.<br />
* '''[[Historic-Links|Other Links]]'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=NA-MIC_Collaborations&diff=93628NA-MIC Collaborations2016-10-25T06:50:05Z<p>Kikinis: </p>
<hr />
<div>[[image:HexQual5-Dec06small.png|thumb|left|300px|[[NA-MIC_NCBC_Collaboration:Automated_FE_Mesh_Development|NCBC Collaboration: Automated FE Mesh Development]]]]<br />
<br />
<br />
===[[NA-MIC External Collaborations]]===<br />
This page captures collaborations between NA-MIC and the broader research community. Some of these collaborations are funded through the NIH NCBC Collaboration funding mechanism.<br />
<br />
===[[NA-MIC Internal Collaborations]]===<br />
This page captures all collaborative projects between team members of the various [[Cores|cores]] of NA-MIC.</div>Kikinishttps://www.na-mic.org/w/index.php?title=Events&diff=93627Events2016-10-25T06:47:54Z<p>Kikinis: </p>
<hr />
<div>__TOC__<br />
== Introduction ==<br />
NA-MIC organizes a variety of events:<br />
* Workshops address specific research focus areas. <br />
* Training events aim at training NA-MIC participants and outsiders in NA-MIC technologies. <br />
* Project weeks are intended for making progress in a variety of projects. <br />
<br />
The majority of NA-MIC events are hands-on and open to collaborators and interested scientists.<br />
<br />
== [[TCON:Main|Telephone Conferences]] ==<br />
== Upcoming Events ==<br />
===2016===<br />
<br />
*'''October 17-21:''' [http://miccai.org/ MICCAI 2016], Athens, Greece<br />
*'''October 21:''' [http://interactivemedical.org/imic2016/ Interactive Medical Image Computing (IMIC) Workshop] Athens, Greece<br />
*'''November 17:''' [[2016_BWH_Radiology_Resident_Education | 3D Slicer Hands-on workshop for Radiology Residents]]<br />
*'''November''' [TBA]:[[2016_MSKCC Training Workshop| MSKCC 3D Slicer Training Workshop]], New York City, NY<br />
*'''November 27-December 2:''' [[RSNA_2016| 102nd Annual Meeting of the Radiological Society of North America, RSNA 2016]], Chicago, IL<br />
<br />
===2017===<br />
<br />
*January 9-13: [[2017_Winter_Project_Week|Winter Project Week]], MIT<br />
<br />
== Standing Events ==<br />
* [[TCON:Main|A list of all upcoming and past teleconferences]]<br />
* [[Engineering:Programming_Events|Hands on Project Events]]<br />
* [http://www.slicer.org/slicerWiki/index.php/Slicer:Developer_Meetings Slicer developer meetings]<br />
* [[Event:Journal Club at BWH|Journal Club at BWH]]<br />
<br />
== Past Events ==<br />
===2016===<br />
*October 7-8: [[media:11thIMRI-Brochure-final.pdf | 11th Interventional MRI Symposium]], Baltimore, MD <br />
**[http://www.hopkinscme.edu/CourseDetail.aspx/80038447 Registration]<br />
**[https://easychair.org/conferences/?conf=imri2016 Abstract Submission] <br />
----<br />
*September 15: [[2016_BWH_Resident_Education | 3D Slicer seminar for BWH Radiology Residents ]], Brigham and Women's Hospital, Boston, MA<br />
----<br />
*August 31: [[2016_Beth_Israel_Training_Workshop | 3D Slicer Hands-on Training Workshop]], Beth Israel Deaconess Medical Center, Boston, MA<br />
----<br />
*June 20-25: [[2016_Summer_Project_Week| Summer Project Week]], Heidelberg, Germany<br />
*June 8: [[2016_Beth_Israel_Psychiatry_Seminar | 3D Slicer Seminar, Beth Israel Deaconess Medical Center]], Boston, MA<br />
----<br />
* May 23-27: [https://docs.google.com/document/d/1BIQHLheqYhsfeHhCTVtid5bZMVywlo1UmeK6-ZmHeq8/edit Medical Image Webapp Software Hackfest], Boston, MA<br />
----<br />
*April 27: Andrey Fedorov invited presentation at the [https://cancer.stonybrookmedicine.edu/2016_ResearchSymposium 2016 Gloria and Mark Snyder Symposium for Cancer Medicine], Stony Brook, NY ([https://dx.doi.org/10.6084/m9.figshare.3205939.v1 | slides])<br />
*April 15: [[Mount_Sinai_Hospital_Workshop | 3D Slicer Workshop]], Mount Sinai Hospital, NYC, NY<br />
*April 14: [[StonyBrook_Workshop | 3D Slicer Workshop]], Stony Brook University, Stony Brook, NY<br />
*April 8-9: [[SPL25| SPL 25th Anniversary Celebration]], Harvard Medical School, Boston, MA<br />
*April 5: Greg Sharp lecture ''3D Slicer for Radiotherapy Research'' at [http://dsmf-symposium.dk/program.html Danish Society for Medical Physics Symposium], Copenhagen, Denmark<br />
----<br />
*March 15-16: [http://ncigt.org/8th-ncigt-and-nih-image-guided-therapy-workshop 8th NCIGT and NIH Image Guided Therapy Workshop], Bethesda, MD<br />
*March 13: Ron Kikinis invited presentation at [http://www.ci4cc.org/events/spring2016 Cancer Informatics for Cancer Centers (CI4CC) Spring 2016 Symposium and workshop], Napa, CA (workshop materials: http://qiicr.org/CI4CC-Spring2016-ASW)<br />
----<br />
*February 11: [[FAID_2016|ICM-MIT-Harvard workshop, French American Innovation Day]], MIT <br />
----<br />
*January 26: [http://iactalks.iac.es/talks/view/865 Ron Kikinis' invited presentation at Instituto de Astrofísica de Canarias - IAC, "Tsunami in the Procedure Room, the Growing Challenge of Managing Data in Image Guided Interventions and Surgery"]<br />
*January 14: [[CHB|3D Slicer Workshop at Children's Hospital]], Boston, MA<br />
*January 7: [[Events:TutorialContestJanuary2016 |2016 Tutorial Contest]], MIT<br />
*January 4-8: [[2016_Winter_Project_Week|'''Winter Project Week''']], MIT<br />
<br />
===2015===<br />
*December 14-18: [[Montevideo_Uruguay_2015| 3D Slicer and SlicerIGT at Universidad de la República]], Montevideo, Uruguay<br />
----<br />
*November 29-December 4: [[RSNA_2015| 101th Annual Meeting of the Radiological Society of North America, RSNA 2015]], Chicago, IL<br />
*November 26-28: [[SlicerCMFWorkshop_Italy2015 | Cranio Maxillo Facial imaging workshop using SlicerCMF]], Italy<br />
*November 23: [[HST.583_2015_Brain_Mapping_for_Neurosurgery | Harvard-MIT Division of Health Science and Technology HST.583 Lab - Brain Mapping for Neurosurgery]]<br />
*November 19: [[Brown_2015| 3D Slicer Workshop at Brown University]], Providence, RI<br />
*November 16: [[MGH_2015 | 3D Slicer Tutorial]], MGH, Boston, MA<br />
----<br />
*October 19-21: [http://www.ci4cc.org/events/fall2015 Fall 2015 CI4CC Symposium and Workshop]: [https://goo.gl/MDq0u8 Quantitative Image Informatics for Cancer Research (QIICR) presentation by Andrey Fedorov], San Diego, CA<br />
*October 9: [http://interactivemedical.org/imic2015/ MICCAI 2015 - Interactive MIC 2nd edition], Munich, Germany<br />
*October 5: [http://projects.iq.harvard.edu/dtichallenge15/home MICCAI 2015 DTI Challenge Workshop - 5th edition], Munich, Germany<br />
----<br />
*September 14: [[HST.583_2015 | Harvard-MIT Division of Science Health and Technology HST.583 Lab- The Life Cycle of Medical Imaging Data]]<br />
*September 1: [[Events:2015_Ron_visit|SPL Introduction and Slicer Workshop]], Szeged, Hungary<br />
----<br />
*August 29: Ron Kikinis Keynote Lecture "[[media:2015-09-06-Tsunami.pptx |Tsunami in the Procedure Room]]: The Growing Challenge of Managing Data in Image-Guided Interventions and Surgery" at the [http://www.iccas.de/symposium/ ICCAS International Symposium on Computer-Assisted Surgery], Leipzig, Germany (the download is about 49MB) <br />
*August 24-25: [[Brno_visit_2015| dMRI Collaboration with CEITEC]], Brno, Czech Republic<br />
*August 17: Ron Kikinis presented the state of 3D Slicer to BISTI, Natcher Building, NIH, Bethesda, MD ([[media:2015-11-11-Slicer-Status.pptx|download here, ~79MB]]).<br />
*August 7-8: Steve Pieper presented 3D Slicer at [http://www.mbl.edu/imaging/escaping-flatland-workshop-2015/| Escaping Flatland: Imaging biological architecture and events in 3 dimensions], Woods Hole Marine Biology Laboratory. [http://videocenter.mbl.edu/videos/video/1123/ Video of the event] is available. Note that two feeds are available and the user can toggle between the live video and the screen.<br />
*August 6: [[Slicer_WS_Morioka_2015| Slicer Workshop]], Morioka, Iwate, Japan<br />
----<br />
*July 15: [http://aapm.org/meetings/2015AM/PRAbs.asp?mid=99&aid=27746 American Association for Medical Physics: Open Libraries for Research], Anaheim, CA<br />
----<br />
*June 21-24: [[2015_Summer_Project_Week|'''Summer Project Week''']], Barcelona, Spain<br />
*June 11: [[UNC_2015 | 3D Slicer Training Workshop for NeuroImaging]], University of North Carolina at Chapel Hill, NC<br />
*June 8: [[BU_2015 | 3D Slicer Training Workshop for Radiologists]], Boston University School of Medicine, Boston, MA<br />
*June 7: [[Autoseg_2015 | Automatic Segmentation Algorithm Workshop]], Toronto, Canada<br />
*June 7: [[IUPESM_2015| Slicer RT Tutorial, World Congress on Medical Physics and Biomedical Engineering]], Toronto, Canada<br />
----<br />
*May 27: [http://qiicr.org QIICR] presentation and 3D Slicer demo at the annual meeting of the NCI [http://itcr.nci.nih.gov/ Informatics Technology for Cancer Research (ITCR)] project, UCSD, San Diego, CA<br />
----<br />
*April 13-14: demonstration of 3D Slicer at the annual face-to-face meeting of the NCI Quantitative Imaging Network, Rockville, MD<br />
----<br />
*March 30-31: 3D Slicer invited demonstrations at [http://www.ci4cc.org/events/spring2015 Cancer Informatics for Cancer Centers (CI4CC) Spring 2015 Symposium & Genomics Workshop], Bethesda, MD<br />
*March 26: [[Shiga_2015_Workshop | 3D Slicer Workshop]], Shiga, Japan<br />
*March 25-26: [[Shanghai_2015 | 3D Slicer Invited Workshop]], Shanghai, China<br />
*March 24: [[Hangzhou_2015 | 3D Slicer Invited Workshop]], Hangzhou, China<br />
*March 11: [[Construction and Superimposition of 3D Surface Models IADR 2015]], Boston, MA<br />
----<br />
*February 27-28: [[2015_TWMU_Seminar| Medical Device Seminar]], Tokyo Women's Medical University, Tokyo, Japan<br />
*February 19: [[Stanford 2015|3D Slicer invited tutorial]], Stanford University<br />
----<br />
*January 22: [http://acoustic.univ-rennes1.fr/doku.php/mdbs2015 Deep Brain Stimulation Workshop], Rennes, France<br />
*January 5-9: [[2015_Winter_Project_Week| '''Winter Project Week''']], Salt Lake City, UT<br />
<br />
===2014===<br />
*December 16-17: [[Moffitt_2014|3D Slicer Invited workshop]], Moffitt Cancer Center, Tampa, FL<br />
----<br />
*November 30-December 5: [[RSNA_2014| 100th Annual Meeting of the Radiological Society of North America, RSNA 2014]], Chicago, IL<br />
*November 18-19: [[Iowa2014| 3D Slicer Workshop]], Iowa City, IA<br />
*November 20: [[CMF_Workshop_Cleveland_2014| 3D Cranio Maxillo Facial workshop]], CWRU, Cleveland, OH<br />
----<br />
*October 27: [[Prof_Sugiyama_and_Dr_Oyama_visit | Prof. Sugiyama and Dr. Oyama visit at BWH]]<br />
*October 18-22: [http://w3.cns.org/meetings/2014/ Annual Meeting of the Congress of Neurological Surgeons], Boston, MA<br />
*October 10-11: [http://radiologie.uniklinikum-leipzig.de/radiologie.site,postext,imri,a_id,700.html 10th Interventional MRI Symposium], Leipzig, Germany<br />
*October 4: [[Pretoria2014| 3D Slicer Workshop]] at the [http://www.pah.org.za/ Steve Biko Academic Hosptial] in Pretoria, South Africa<br />
----<br />
*September 18-19: 7th NCIGT and NIH Image Guided Therapy Workshop, Cambridge, MA<br />
*September 18: [http://www.slicerigt.org/wp/miccai-2014-tutorial/ Building image-guidance systems from open-source components] tutorial at MICCAI'14, Cambridge, MA<br />
*September 15: [[DBS_Meeting_2014 | Deep Brain Stimulation Meeting, MICCAI 2014]], Boston, MA<br />
*September 14: [[DTI_Challenge_2014| DTI Tractography Challenge, MICCAI 2014]], Boston, MA<br />
*September 14: [http://interactivemedical.org/imic2014/index.html IMIC 2014 at MICCAI 2014], Boston, MA<br />
----<br />
*August 26-30: [http://www.slicerigt.org/wp/embc-2014-tutorial/ EMBC'14 Tutorial: Building image-guidance systems from open-source components], Chicago, IL<br />
*August 5: [[AAPM 2014 | 3D Slicer User Group at AAPM 2014]], Austin, TX<br />
----<br />
*July 1: [[2014_Neurotrauma_Symposium| 32nd Annual Neurotrauma Symposium: S08 Breakout Session on Advances in Multimodal Imaging of TBI]] organized by John van Horn with scientific presentations by Guido Gerig and Andrei Irimia (all NA-MIC), San Francisco, CA<br />
----<br />
*June 26: [http://www.na-mic.org/Wiki/index.php/2014_Tutorial_Contest Slicer Tutorial Contest, MIT, Cambridge, MA ]<br />
*June 23-27: [[2014_Summer_Project_Week| '''Summer Project Week at MIT''']]<br />
----<br />
*April 15:[[Brown_University_Workshop | 3D Slicer workshop]], Brown University, Providence, RI<br />
----<br />
*March 28: [http://slicer.kitware.com/midas3/download/item/133719/2014-QIN_F2F-Fedorov-QIICR_Slicer.pdf Slicer/QIICR presentation] Annual Face to face meeting of the Quantitative Imaging Network, NCI, Rockville, MD<br />
*March 19: [[CEA_2014| Follow-up meeting on the use of Slicer]] Prof. Dhenain's team, CEA Paris, France<br />
*March 10-14: [[Pichl_2014| Winter School for Medical Physics]], Pichl-Schladming, Austria<br />
*March 6-10: [[ECR_2014| European Congress of Radiology]], Vienna, Austria<br />
----<br />
*February 18-20: [[Second_Medical_Image_Registration_Retreat,_Puerto_Rico| Second Medical Image Registration Retreat]], San Juan, Puerto Rico<br />
*February 16: [[SPIE_2014 | Grand Challenges Panel]], SPIE 2014, San Diego, CA<br />
*February 14: [http://www.na-mic.org/Wiki/index.php/USC_2014 Slicer Training workshop], Los Angeles, CA<br />
----<br />
*January 27-29: [http://www.na-mic.org/Wiki/index.php/TWMU_Visit_2014 Visit by Tokyo Women's Medical University and Japan National Cancer Center], SNR Lab, BWH, Boston, MA<br />
*January 7: [http://wiki.na-mic.org/Wiki/index.php/2014_SLC_Training_Workshop 3D Slicer Training workshop], Salt Lake City, UT<br />
*January 6-10: [[AHM_2014| '''AHM, EAB, Winter Project Week''']], Salt Lake City, UT<br />
*January 4: [http://www.sci.utah.edu/cibcwksp2014.html Software Tools for Image Based Modeling, Simulation, and Visualization], Workshop, Salt Lake City, UT<br />
<br />
===2013===<br />
*December 17: [http://wiki.na-mic.org/Wiki/index.php/CEA_2013 MIRCEN/CEA Slicer event], Paris, France<br />
*December 1-6: [[RSNA_2013| RSNA 2013]], Chicago, IL<br />
----<br />
*November 20: [[CMF_Workshop_Cleveland_2013| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH<br />
----<br />
*October 27-30:[[TWMU_Visit_2013| Visit by Tokyo Women's Medical University Visit]], SNR Lab, BWH<br />
*October 22-23:[[QIICR_2013| QIICR brainstorming and kickoff meeting]], 1249 Boylston St., Boston<br />
*October 17: [[Brno_2013| 3D Slicer Workshop]], Brno, Czech Republic<br />
----<br />
*September 30: [[Changchun_2013| 3D Slicer invited seminar]], Changchun, China<br />
*September 29: [[Beijing_2013| 3D Slicer invited workshop, PLA Hospital]], Beijing, China<br />
*September 26: [http://www.dkfz.de/en/mbi/ctk-miccai2013/index.html MICCAI 2013 CTK Tutorial], Nagoya, Japan<br />
*September 22: [[MICCAI2013| MICCAI 2013 DTI Tractography Challenge on Peritumoral White Matter Anatomy for Neurosurgical Decision-Making]], Nagoya, Japan<br />
*September 11: [[WFNS2013| Sonia Pujol's invited lectures, 15th WFNS World Congress of Neurosurgery]], Seoul, Korea<br />
----<br />
*August 5: [[AAPM 2013 | 3D Slicer User Group, AAPM 2013]], Indanapolis, IN<br />
*August 1-2: [[BRAINS_CAMP| BRAINSCamp workshop]], Iowa City, IA<br />
----<br />
*July 19: [[Dr.Dhenain's visit to the SPL, Boston, MA |Dr. Dhenain's visit to the SPL]], Boston, MA<br />
----<br />
*June 26-29: [[CARS2013| 3D Slicer hands-on workshop on Image-Guided Therapy and joint Slicer/CTK/MITK workshop]], CARS 2013, Heidelberg, Germany<br />
*June 26: [http://tbi.ci.uchicago.edu/diffusion-mri-tbi-workshop Diffusion MRI in Traumatic Brain Injury 2013; Workshop on Diffusion MRI in Traumatic Brain Injury: Software Tools and International Shared Data Repository], Heidelberg, Germany<br />
*June 17-21: [[2013_Summer_Project_Week|'''Summer Project Week at MIT]]''', [[2013_Tutorial_Contest|Summer 2013 Tutorial Contest]]<br />
*June 14: [[UAEM_Visit|Prof. Avila-Vilchis and Prof. Vilchis-Gonzales visiting the SPL]], Boston, MA<br />
*June 14: [[BWH_2013| 3D Slicer Hands-on Workshop]], Surgical Planning Lab, 1249 Boylston St., Boston, MA<br />
----<br />
*May 31: [[AAPM_New_England_Chapter_Summer_Meeting| Invited Lecture, AAPM Chapter New England Summer Meeting]], Portsmouth, NH<br />
*May 24: [[Kitware_Course| 3D Slicer: Visualize and Analyze your datasets, Kitware Training Course,]] Lyon, France<br />
*May 20-24: [http://www.commontk.org/index.php/CTK-Hackfest-May-2013 CTK Hackfest], Kingston, Ontario, Canada<br />
*May 11: [http://www.youtube.com/watch?v=9t1V-Ro0Cak SlicerIGT hands-on demo], Science Rendezvous, Kingston, Ontario, Canada<br />
----<br />
*April 22: [[2013_ISMRM_CardiacStudyGroup_CARMA|ISMRM 2013 Cardiac Study Group Tutorial]]: Slicer for segmentation and enhancement quantification in cardiac LGE-MRI. Salt Lake City, UT<br />
*April 15: [[2013_Juntendo_University| DTI Challenge Presentation, Jutendo University, Tokyo, Japan]]<br />
*April 10-11: [http://www.na-mic.org/Wiki/index.php/Iwate_2013_Training Slicer Ultrasound Workshop], Iwate, Japan<br />
*April 9: [http://www.na-mic.org/Wiki/index.php/Tokyo_2013_Training Slicer Workshop], Tokyo, Japan<br />
*April 8: [[Imaging_in_Neuroscience| Imaging in Neuroscience Course]], Boston<br />
----<br />
*March 21-23: [http://www.ncigt.org/pages/IGT_Workshop_2013 6th NCIGT and NIH Image Guided Therapy Workshop] in Crystal City, VA<br />
*March 11: [[CIR_visit_Vienna_Medical_Center | Slicer Lecture]], Computational Image Analysis and Radiology Laboratory, Medical University, Vienna, Austria<br />
*March 11: [[SlicerRT_workshop | SlicerRT workshop]], Medical University, Vienna, Austria<br />
*March 8: [http://www.na-mic.org/Wiki/index.php/Autoseg_2013 Automatic Segmentation Algorithm Workshop], Boston, MA<br />
*March 7-11: [http://www.na-mic.org/Wiki/index.php/ECR_2013 European Congress of Radiology], Vienna, Austria<br />
*March 4-5: 3D Slicer is presented at the annual face-to-face meeting of the [http://imaging.cancer.gov/programsandresources/specializedinitiatives/qin NCI Quantitative Imaging Network ] ([[Media:3DSlicer-NCI-QIN-F2F-March2013_poster_Fedorov.ppt|poster]] and [[Media:3DSlicer-NCI-QIN-F2F-March2013_tool_sharing_slides_Fedorov.ppt|slides]])<br />
*March 4: [[2013-03-4- TWMU_Visit| Delegates from Research Administration Office, Tokyo Women's Medical University visits SNR Lab/NCIGT and AMIGO]]<br />
----<br />
*February 28-March 5: [[2013_Dr_Chen_Visit | Visit of Dr. Xiaolei Chen, PLA General Hospital, Beijing]], SPL<br />
*February 22: [[2013-02-22 Dr. Takahashi's Visit to SNR Lab/NCIGT and AMIGO|Dr. Takahashi's Visit to SNR Lab/NCIGT and AMIGO]]<br />
*February 14: [[2013-02-14-Slicer_Demo_at_Memorial_Sloan_Kettering_Cancer_Center | Demo of the Slicer segmentation and registration tools]], Memorial Sloan Kettering Cancer Center<br />
*February 14: [[2013-02-14-Korean_Surgical_Robot_Research_Team_Visit | Surgical Navigation and Robotics Laboratory hosts a robotic surgery research group from Korea]]<br />
*February 9-14: [http://www.na-mic.org/Wiki/index.php/SPIE_2013_DTI_Workshop SPIE 2013 Diffusion Tensor Imaging Course], Orlando, FL<br />
*February 7: [[2013-02-07-MGH_Slicer_user_meeting | Slicer user/developer meeting with the MGH user group]]<br />
----<br />
*January 31: [[GolbyLabMeeting_DTIChallenge | MICCAI DTI Challenge Presentation]], Golby Lab Meeting, Brigham and Women's Hospital, Boston, MA<br />
*January 28: [http://www.assembla.com/wiki/show/slicerrt/20130128_slicer_matlab_personal_cloud_meeting Slicer Matlab personal cloud meeting]<br />
*January 7-11: [[AHM_2013|'''AHM, EAB, Winter Project Week in Salt Lake City]]'''<br />
<br />
===2012===<br />
*December 10: [[ PNL_2012 | PNL Slicer4 Training Workshop]]<br />
*December 3: [[HST_2012 | Harvard-MIT Division of Health Science and Technology - Diffusion Tensor Imaging Course]]<br />
----<br />
*November 25-30: [[RSNA_2012 | 98th Annual Meeting of the Radiological Society of North America (RSNA 2012)]], Chicago, IL<br />
*November 14: [[CMF_Workshop_Cleveland_2012| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH<br />
*November 8-9: [http://meetings.nigms.nih.gov/index.cfm?event=general&ID=15208 NCBC showcase event in Washington DC]: [[media:NA-MIC-Overview-2012-11.pdf|PDF of the overview slides]]<br />
----<br />
* October 8: [[Niguarda_Ospedale_Visit| Invited visit to the Epilepsy and Parkinson Surgery Centre "Claudio Munari" Ospedale Niguarda "Ca' Granda"]], Milan, Italy<br />
* October 1: [[DTI_Tractography_Challenge_MICCAI_2012| DTI Tractography Challenge, MICCAI 2012, Nice, France]]<br />
* October 1: [http://www.sci.utah.edu/stia2012-home.html 2nd International MICCAI Workshop on Spatiotemporal Image Analysis for Longitudinal and Time-Series Image Data (STIA'12]), MICCAI 2012, Nice, France<br />
----<br />
* September 25-26: [[Pieper-MeVis-2012-09| Steve Pieper visited MeVis]]<br />
* September 21: [http://www.ncigt.org/pages/IGT_Workshop_2012 5th NCIGT and NIH Image Guided Therapy Workshop], Boston, MA<br />
* September 20: [[DrShekhar_Visit_Sep_2012|Dr. Raj Shekhar's visit to NCIGT]]<br />
* September 12: [[Universidad Autonoma del Estado de Mexico Symposium | 3DSlicer invited lecture]], First Symposium on Medical Bioengineering, Universidad Autónoma del Estado de México, Mexico City, Mexico<br />
* September 10:''' [[HST_583_2012| Harvard-MIT Division of Science Health and Technology HST.583 - Neuroimage Analysis Lab]]<br />
----<br />
* August 29: [[BU_Slicer4_Training_Session| BU Slicer4 Training session]]<br />
* August 20-21: [[Core 1 Retreat 2012|Core 1 Retreat 2012]] Park City, UT<br />
* August 20: [[Slicer4.2Planning|Slicer 4.2 Planning meeting]]<br />
----<br />
* July 30: [[AAPM_2012 | 3D Slicer User Group]] AAPM, Charlotte, NC<br />
* July 9-13: [http://www.commontk.org/index.php/CTK-Hackfest-Jul-2012 CTK Hackfest], Boston, MA<br />
----<br />
* June 30: [[CARS_2012 | NA-MIC IGT Workshop, CARS 2012]] <br />
* June 18-22: [[2012_Summer_Project_Week|'''Summer Project Week at MIT''']]; [[2012_Tutorial_Contest| Summer 2012 Tutorial Contest]]<br />
----<br />
* May 21-22: [[Madrid-May-21-2012-Slicer-Workshop| Slicer workshop]] Madrid, Spain<br />
* May 16: [http://www.ias.uwa.edu.au/lectures/kikinis| Public lecture, UWA], Perth, Australia <br />
* May 14: [http://www.ias.uwa.edu.au/masterclass/kikinis Masterclass, UWA], Perth, Australia<br />
* May 2: [http://www.hisa.org.au/events/event_details.asp?id=224112 Slicer workshop], St. Vincent's Hospital, Fitzroy, Melbourne, Australia <br />
----<br />
* April 30-May 1: [http://www.cs.ucl.ac.uk/opensource_mia_ws_2012/ Slicer presentation], International Symposium on Biomedical Imaging (ISBI 2012)], Barcelona, Spain<br />
* April 26: [http://www.hisa.org.au/events/event_details.asp?id=224111 Slicer workshop], St. Vincent's Hospital, Sydney, Australia<br />
* April 5: [[NEU-Medical-Physics-Seminar| Northeastern University Medical Physics Seminar, Gregory Sharp, Nobuhiko Hata]]<br />
----<br />
* March 20-21: [[Iowa-March-20-2012-Slicer-Workshop| Slicer workshop in Iowa]] <br />
* March 16: [[Particle_UNC_Utah| Particle training seminar, UNC]] Chapel Hill, NC<br />
* March 5-6: Slicer booth presentation at the annual [https://wiki.nci.nih.gov/display/CIP/QIN Quantitative Imaging Network] face-to-face meeting; NCI, Washington DC<br />
----<br />
* February 29: [[Chapel-Hill-February-29-2012-Slicer-Talk| Slicer talk]], UNC<br />
* February 27: [[Slicer-4.1| Plans for Slicer 4.1]]<br />
* February 14: [[TWMU_Medtronics_OpenIGTLink| TWMU Open IGT Link - Stealth station Project, Kick-off]], Tokyo, Japan<br />
* February 5: [[SPIE_2012_DTI_Workshop| SPIE 2012 DTI Course]], San Diego, CA<br />
----<br />
* January 9-13: [[AHM_2012|'''AHM, EAB, Winter Project Week in Salt Lake City''']]<br />
<br />
=== 2011 ===<br />
*November 27-December 2: [[RSNA_2011 | 97th Annual Meeting of the Radiological Society of North America (RSNA 2011)]], Chicago, IL<br />
*November 14-18: [http://www.commontk.org/index.php/CTK-Hackfest-Nov-2011 CTK Hackfest], Sophia Antipolis, France<br />
*November 11: [[SFN2011 Diffusion_Tensor_Imaging_Analysis Workshop |White Matter Exploration with Diffusion Tensor Imaging: Fundamentals and Perspectives - SFN 2011 Workshop]], Washington DC<br />
*November 9: [[CMF_Workshop_Cleveland| 3D Cranio Maxillo Facial workshop, CWRU]] Cleveland, OH<br />
*November 3: [[2011_Slicer4-PreRSNAHackFest|Slicer4 PreRSNA Hackfest, Google hangouts]]<br />
*November 2: [[BWH_Resident_Fair| 3DSlicer exhibit]], BWH Resident Fair, Boston, MA<br />
----<br />
*October 20: [[2011_Slicer4-Documentation-Sprint|Slicer4 Documentation Sprint]]<br />
*October 14-15: [[2011_Algorithms_Retreat|Algorithm Core Retreat in New England]]<br />
*October 12-13: [http://www.ncigt.org/pages/IGT_Workshop_2011 NCIGT Workshop], Washington DC<br />
----<br />
*September 28: [http://wiki.na-mic.org/Wiki/index.php/Event:Journal_Club_at_BWH Journal Club talk: Seyed-Ahmad Ahmadi]<br />
*September 26-28: [[Events:2011_Hungary_Slicer_Training|Programming and End-User Training]] Szeged, Hungary<br />
*September 18: [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge_MICCAI_2011 DTI Tractography for Neurosurgical Planning: A Grand Challenge - MICCAI 2011 Workshop], Toronto, Canada'''<br />
----<br />
*August 4: [[Events:UBC_3D_Slicer_workshop_August_2011|UBC 3D Slicer workshop August 2011]]<br />
*August 2: [[Events:2011-08-02-AAPM-Slicer-Users-Group-Meeting|3D Slicer users group meeting]], AAPM annual meeting, Vancouver, BC, Canada]]<br />
----<br />
*July 19-21: [[Events:Slicer4-Review-07-2011 | Slicer 4 Review and Programming Sprint]], 1249 Boylston St., Boston, MA<br />
----<br />
*June 26-30: [[Events:3DSlicer_Booth_OHBM_2011 | 3DSlicer Booth, OHBM 2011]], Quebec City, Canada<br />
*June 20-24: [[2011_Summer_Project_Week|'''Summer Project Week at MIT''']]<br />
*June 15: [[Events:2011-06-15-Robarts-Slicer-Workshop|Slicer Workshop]], Biomedical Imaging Research Centre, University of Western Ontario, Canada<br />
*June 13: [http://www.na-mic.org/Wiki/index.php/Summer_2011_Tutorial_Contest Summer 2011 Tutorial Contest] Submission dead-line.<br />
*June 7: [[Events:2011-06-07-UCSF-Diffusion-Imaging-Workshop|UCSF Diffusion Imaging Workshop]], San Francisco<br />
----<br />
*May 5: [[Events:Computational_Methods_for_Radiation_Oncology|Computational Methods for Radiation Oncology]], Boston, MA<br />
----<br />
*April 27: [[Events:Slicer-Hands-On-Hiroshima-2011|Slicer and OpenIGTLink Hands-on Training]], Hiroshima, Japan<br />
*April 22: [[Event:2011-04-UtahDBP-Training|Slicer Hands-on Training For The Utah Afib Team]]<br />
*April 12: [[Event:2011-04-DiMaioTalk|Talk by Simon DiMaio "da Vinci and Beyond"]]<br />
*April 5: [http://www.na-mic.org/Wiki/index.php/Events:_Johns_Hopkins_University_Seminar_April_2011 Training Workshop], Johns Hopkins University, Baltimore, MD<br />
----<br />
*March 16-18: [http://vizbi.org VIZBI 2011] in Cambridge, MA includes NAMIC-affiliated speakers and VTK tutorials.<br />
*March 15-16: [http://catalyst.harvard.edu/services/ittm/module1.html Harvard Catalyst Biomarkers and Imaging in Drug Development course] includes [[media:Pieper-Image Processing Strategies.pptx|a presentation on image processing approaches]] including NA-MIC and 3D Slicer.<br />
*March 11: [[CTSC:Slicer_handson.021810| 3D Slicer Quantitative Medical Image Data Visualization Hands-On Workshop, Countway Room 403, (12-1pm)]] <br />
*March 4: New [http://www.slicer.org/slicerWiki/index.php/Slicer3:3.6_Final_Issues#DONE:_Issues_fixed_for_inclusion_in_Slicer_3.6.3_--_included_in_release_builds_of_March_4.2C_2011 Slicer3.6.3 Patch Release]<br />
----<br />
*February 19-23: [[Event:2011_Registration_Retreat|Registration Retreat]]<br />
*February 18: [[CTSC:Slicer_handson.021810| 3D Slicer Quantitative Medical Image Data Visualization Hands-On Workshop]], Harvard Countway Library room 403, (12-1pm)<br />
*February 7-11: [http://www.commontk.org/index.php/CTK-Hackfest-Feb-2011 CTK Hackfest], Chapel Hill, NC<br />
*February 4: [[Media:Fedorov-MGH-4Feb2011.pdf|Presentation of 3D Slicer for the MGH tumor measurement group]]<br />
----<br />
*January 10-14: '''[[AHM_2011|AHM, EAB, Winter Project Week in Salt Lake City]]'''<br />
<br />
=== 2010 ===<br />
*December 8: [[Events:Manchester-Dec-2010|Slicer workshop]], Manchester, UK<br />
*December 6-7: [[Events:Dundee-Dec-2010|Slicer workshop]], Dundee, UK<br />
----<br />
*November 28-December 3: RSNA 2010, The 96th Annual Meeting of the Radiological Society of North America, Chicago IL<br />
**November 29: 2:30 pm-4:00 pm: [[Events:RSNA_2010| 3D Interactive Visualization of DICOM images with Slicer]], Chicago IL<br />
**November 30: 10:30 am-12:00 pm: [[Events:RSNA_2010_CTSA| Quantitative Medical Imaging for Clinical Research and Practice]], Chicago IL<br />
**December 2: 10:30 am-12:00 pm: [[Events:RSNA_2010_didactic| Lifecycle of an imaging biomarker: from validation to dissemination]], Chicago IL<br />
* November 17-18: [[EngineeringRetreat2010|Engineering Core retreat]]<br />
* November 12: [[MGH-NA-MIC-2010-Kickoff|MGH Kick-off meeting with Algorithms and Engineering]]<br />
* November 8-9: [[2010-WestCoastMaster|West Coast Events]]<br />
* November 5-6: [[AlgorithmRetreat2010|Algorithm Core retreat]]<br />
* November 4-6: [[WidgetDesign2010|Widget Design Fiesta]], Kitware, South Carborro, NC<br />
* November 4-5: [[media:HataJJTalkNov2010.pdf |Robotics Presentation by Noby Hata]], Advances in Surgical Technologies Symposium, Celebration, FL<br />
----<br />
* October 25-26: [[Iowa-NA-MIC-2010-Kickoff| Iowa NA-MIC Kickoff meeting (UNC Core 1 visit)]]<br />
* October 18:[[HST_583_2010_DTI_Course| Harvard MIT Division of Health Sciences and Technology - Diffusion Tensor Imaging Lab]] <br />
----<br />
* September 24: [http://lcib.rutgers.edu/miccai2010/ Prostate Cancer Imaging Workshop] MICCAI 2010, Beijing, China<br />
* September 23: [http://www.grand-challenge.org/index.php/MICCAI_2010_Workshop Workshop on Medical Image Analysis for the Clinic - A Grand Challenge] <br />
* September 23: [[Beijing_2010_NA-MIC_Workshop|Slicer Tutorial]], Chinese PLA General Hospital in Beijing, China<br />
* September 20: [[MICCAI_2010| NA-MIC Tutorial]], MICCAI 2010, Beijing, China<br />
* September 13: [[HST_583_2010| Harvard MIT Division of Health Sciences and Technology - Neuroimage Analysis Lab]]<br />
----<br />
* August 12-13: [[QtAugust2010| Review of Qt port]]<br />
* August 11: [[2010-Slicer-UNCDuke|Slicer training event]], UNC and Duke<br />
* August 10: [[2010-Sato-talk|Research retreat of SNR Laboratory, followed by Dr. Yoshinobu Sato's talk]]<br />
* August 5: [http://www.termine-meduniwien.at/mediafiles/38/Vortragsankuendigung_Prof_Ron_KIKINIS_05082010.pdf?sid=4f2a2b592fc7004cea39a34993b1d72d Presentation], AKH, Vienna, Austria<br />
----<br />
* July 1: [[2010-Slicer-StLouis|Slicer training event in St. Louis]]<br />
----<br />
* June 26: [[2010_CARS| NA-MIC Tutorial]], Computer Assisted Radiology and Surgery Conference in Geneva, Switzerland<br />
* June 22" [http://www.na-mic.org/Wiki/index.php/Summer_2010_Tutorial_Contest Slicer Tutorial Contest, MIT, Cambridge, MA]<br />
* June 21-25: '''[[2010_Summer_Project_Week|Summer Project Week at MIT]]'''<br />
* June 18: [[2010_CCA_Retreat|Clinical Computational Anatomy one day retreat]], Boston, MA<br />
----<br />
* May 20-23:[[cscbce_2010 | 5th Canadian Student Conference <br />
on Biomedical Computing and Engineering]]<br />
* May 17-21: [http://www.commontk.org/index.php/CTK-Hackfest-May-2010 CTK Hackfest], Georgetown University<br />
* May 12: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Registration Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA<br />
----<br />
* April 29: [[2010_Slicer36_Module_Cull|Review of modules to keep and cull for the 3.6 release]]<br />
* April 28: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Visualization Hands-On Workshop]], Countway Library, Harvard Medical School, Boston, MA<br />
* April 9-10: [[2010_University.of.Iowa| NA-MIC Training Workshop]], University of Iowa<br />
* April 7: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Registration Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA<br />
----<br />
* March 24: [http://catalyst.harvard.edu/services/imagingcourses.html 3D Slicer Medical Image Data Visualization Hands-On Workshop], Countway Library, Harvard Medical School, Boston, MA<br />
* March 19: [[U-Tokyo-visit-03192010| NCIGT Workshop with delegates from University of Tokyo]], Brigham and Women's Hospital, Boston, MA<br />
* March 16: [[Events:Slicer-Hands-On-Tokyo-2010| Image Guided Therapy research using 3D Slicer - Hands-On Workshop]], Tokyo Women's Medical University, Tokyo, Japan (page in Japanese)<br />
* March 10: [http://summit2010.amia.org/session-details NA-MIC Presentation], AMIA 2010<br />
* March 9: Registration Clinic at [http://www.ncigt.org/pages/IGT_Workshop_2010 IGT Workshop], Arlington, VA<br />
* March 7-10: Several NA-MIC personnel are participating in [[Events:CTK-Pre-Hackfest-2010|The CTK Pre-Hackfest]], Heidelberg, Germany. This meeting is a kick off that is expected to lead to active working meetings similar to the NA-MIC Project Week activities. The meeting is organized by the [http://commontk.org CTK] group.<br />
* March 3: Steve Pieper presents on "Visualizing Anatomy and Function from MRI Data", [http://vizbi.org/2010/ the 2010 EMBO Workshop on Visualizing Biological Data]. NA-MIC Wiki page with [[VIZBI2010|Supplemental information from the VIZBI Conference]]. [http://www.nature.com/nmeth/journal/v7/n3s/index.html A special edition of Nature Methods] contains papers by the presenters.<br />
----<br />
* February 24: [[CTSC:Slicer_handson.022410| 3D Slicer Medical Image Data Visualization Hands-On Workshop]], Countway Library, Harvard Medical School, Boston, MA<br />
* February 14: [[Events:CTK-Workshop-SanDiego-2010| 4th CTK workshop]], SPIE, San Diego, CA<br />
* February 9: [[Hata_BBN_visit|Hata BBN lecture]]<br />
----<br />
* January 4-8: '''[[AHM_2010|AHM, EAB, Winter Project Week in Salt Lake City]]'''<br />
<br />
===2009===<br />
* December 16-17: [[Dec-2009-SlicerAIMBrainstorming|Slicer Annotation and Markup Brainstorming]]<br />
* December 15: [[Dec-2009-SlicerXND-DesignAndEngineering | Slicer/XND Preliminary Design & Engineering Planning Session]], WUSTL]]<br />
* December 1: [[Events:RSNA_CTSA_2009| CTSA]], RSNA, Chicago, IL<br />
----<br />
* November 30: [[Events:RSNA_2009| 3-D Interactive Visualization of DICOM images with Slicer - RSNA 2009]], 95th Annual Meeting of the Radiological Society of North America, Chicago, IL<br />
* November 29: [[Events:CTK-Workshop-Chicago-2009| 3rd CTK workshop]], RSNA, Chicago, IL<br />
* November 23: [[CTSC:Slicer_handson.112309| 3D Slicer Medical Image Data Visualization Hands-On Workshop]], , Countway Library, Harvard Medical School, Boston, MA<br />
----<br />
* October 16: [[SFN2009 Slicer DTI Workshop | Mapping the Brain with Diffusion Tensor Imaging - A Hands-On Workshop]] [http://www.sfn.org/am2009/ Annual Meeting of the Society of Neuroscience], Chicago, IL<br />
* October 9: [[Events:VT-NAMIC-NCBC-Collaboration-meeting-2009| VirginiaTech-NA-MIC collaboration progress update and planning meeting]], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA<br />
----<br />
* September 30: [[CTSC:ACRIN 09/30/09| Quantitative imaging workshop]] ACRIN fall meeting, Arlington, VA. Workshop in collaboration with Duke University and Johns Hopkins.<br />
* September 25: [[Events:CTK-Workshop-September-2009| 2nd CTK workshop]], Oxford UK<br />
* September 24: [http://campwww.informatik.tu-muenchen.de/AMIARCS09/doku.php Augmented Environments for Medical Imaging including Augmented Reality in Computer-Aided Surgery (AMI ARCS)] MICCAI 2009 workshop, London, UK. Demonstration of the [[DBP2:JHU:PerkStation | Perk Station]]. One-on-one tutorial available [mailto:lasso@cs.queensu.ca] on request.<br />
* September 24: [http://smarts.lcsr.jhu.edu/CAI-Workshop-2009 Systems and Architectures for CAI] MICCAI 2009 workshop, London, UK. Presentation of the [[DBP2:JHU:Roadmap | computer assisted intervention plug-in module for 3D Slicer]].<br />
* September 24: [http://www.cs.ucl.ac.uk/miccai/dmfc Diffusion Modelling and the Fibre Cup] MICCAI 2009 workshop, London, UK. Presentation of the DTI tractography validation pilot study.<br />
* September 20-24: [http://wiki.na-mic.org/Wiki/index.php/2009_prostate_segmentation_challenge_MICCAI Prostate MRI Segmentation Challenge"], [http://grand-challenge2009.bigr.nl/index.php MICCAI 3D Segmentation in the clinic: a grand challenge].<br />
* September 20: [http://lmi.bwh.harvard.edu/DMRI09 MICCAI 2009 Tutorial in London: Trends in High Angular Resolution Diffusion Imaging and Brain Tissue Modelling]<br />
* September 20: [http://people.csail.mit.edu/pohl/pmmia09.html MICCAI 2009 Workshop: Probabilistic Models for Medical Image Analysis]<br />
* September 20: MICCAI Workshop on Information theoretic similarity measures for image registration and segmentation<br />
* September 16-17: [[Sept-2009-SlicerWidgetsBrainstorm|Brainstorming Session on next generation widgets for Slicer]]<br />
----<br />
* August 25: [[Events:Slicer_Workshop_August_2009|Slicer Workshop]] at [http://www.ibmisps-worldcongress.org/precongress.asp IBMISPS], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA<br />
* August 21: [[Events:Registration_Summit_August_2009|Registration Meeting]], Surgical Planning Laboratory, 1249 Boylston Street, Boston, MA<br />
----<br />
* June 29: [[Events:CTK-Workshop-June-2009|Common Toolkit Workshop]], [http://www.dkfz.de/index.html DKFZ, Heidelberg, Germany, hosted by the [http://www.dkfz-heidelberg.de/en/mbi/index.html MBI].<br />
* June 28: [http://www.biomedicalimaging.org/2009/Tutorial_04.asp Tutorial on Statistical Shape Analysis: Theory, Software, and Applications] at [http://www.biomedicalimaging.org/2009/default.asp ISBI 2009], Boston, MA.<br />
* June 25: [[Events:TutorialContestJune2009 | Summer 2009 Tutorial Contest]]<br />
* June 22-26: '''[[2009_Summer_Project_Week|The FIRST JOINT Summer Project Week at MIT]]'''<br />
* June 17: [[CAOS2009_Slicer Workshop| Hands-On Workshop for Slicer IGT for Computer Aided Orthopeadic Surgery]]<br />
* June 17: [[SlicerKyusyuJune2009Lecture| Lecture and demonstration, Image Guided Therapy of abdominal organs]], Noby Hata, Kysyu University Medical School, Kyusyu, Japan<br />
* June 16: [[SlicerNagoyaJune2009Workshop| Workshop: How to make your custom IGT software using 3D Slicer]], Noby Hata, Nagoya Institute of Technology, Nagoya, Japan<br />
----<br />
* May 11-12: Core 1 PI meeting, Georgia Tech.<br />
* May 8: [http://www.na-mic.org/Wiki/index.php/IMFAR2009 IMFAR 2009] - [http://www.autism-insar.org/index.php?option=com_content&task=view&id=36&Itemid=105 Presentation], 8th Annual International Meeting for Autism Research (IMFAR) in Chicago, IL] entitled Use of the Slicer3 Toolkit to Produce Regional Cortical Thickness Measurement of Pediatric MRI Data".<br />
* May 8: Focus session on [[Volume Rendering and Loadable Modules: (Engineering & Usability Notes)]].<br />
* May 4-5: Core 1 / Core 2 visit at Georgia Tech ([[May 4, 2009 Notes]], [[May 5, 2009 Notes]]).<br />
----<br />
* March 19: [[NCI Slicer Tutorial 03-19-2009|NCI Slicer tutorial, ]] We had to reschedule! New date TBD!<br />
* March 4: [[2009-03-04-Editor-Usability|Interactive Editor usability]] session in Ron's office<br />
----<br />
* February 24: 1249 Boylston: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Using3.4 Afternoon session to walk through common Slicer3.4 usage scenarios]<br />
* February 24: BWH (location: Mellins Library) [[BWH_RadiologyResident_Training2009.1| NA-MIC 3D Slicer 3.2 Hands-On Workshop]] <br />
* February 17-20: [[GWE_MiniRetreat|GWE Mini Retreat]], Boston, MA<br />
----<br />
* January 28-30: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat_January_28-30,2009 Slicer3 MiniRetreat]<br />
* January 7: [[Events:TutorialContestJan2009| Winter 2009 Tutorial Contest]] <br />
* January 5-9: '''[[AHM_2009| AHM,]] [[2009_EAB|EAB,]] [[2009_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''<br />
<br />
=== 2008 ===<br />
* December 15-16: [[2008_Engineering_review_at_UNC|2008 Engineering review]], UNC, Chapel Hill<br />
* Fall Semester 2008 Ibanez and Schroeder teach [http://public.kitware.com/OpenSourceSoftwarePractice/index.php/Main_Page Open Source Software Course], Rensselaer Polytechnic Institute<br />
* December 8-12: [[2008_IGT_Project_Week|IGT Hands-on Project Week]], Boston<br />
* December 1: [[Events:RSNA2008| Tutorial]], RSNA]], [http://rsna2008.rsna.org/ RSNA conference website]<br />
----<br />
* November 15-19: [[NA-MIC_Lupus_DBP_Worskhop_SFN2008|NA-MIC Lupus DBP White Matter Lesion Tutorial Release at 2008 Society for Neuroscience Annual Meeting]], Washington, DC<br />
* November 18: [[Slicer3_Q&A_2008-11-18|Slicer Q&A Session]], BWH<br />
* November 4: [[NA-MIC_3D_Visualization_Workshop_Massachussetts_General_Hospital|NA-MIC 3D Visualization Workshop]], Massachusetts General Hospital, Boston, MA<br />
----<br />
* October 30 : [[NA-MIC_3D_Visualization_Workshop_Brigham_and_Women's_Hospital| NA-MIC 3D Visualization Workshop]], Brigham and Women's Hospital, Boston, MA<br />
* October 28: [[Harvard_Medical_Education_Day | Harvard Medical Education Day]], Boston, MA<br />
* October 21: Nobuhiko Hata talk, entitled "Role of Image Processing, Navigation and Robots in MRI-guided Intervention", Bioimaging Sciences Division, Department of Radiology, Yale University School of Medicine, New Heaven, CT<br />
* October 17: Nobuhiko Hata talk, entitled "Role of Image Processing, Navigation and Robots in MRI-guided Intervention", Robarts Institute, University of Western Ontario, Ontario, Canada <br />
* October 15-16: [[Robarts_Training_Session | NA-MIC kit training event at The University of Western Ontario]], London, Ontario, Canada<br />
* October 7: [[Stefan_Baumann_visit | Stefan Baumann, Novartis]], 1249 Boylston St., Boston, MA<br />
* October 7: [[Slicer_Day_October_2008|Slicer in the Fall]], 1249 Boylston St., Boston, MA<br />
----<br />
* September 10: [[Miccai_2008_Tutorial| Interfacing third-party software with the NA-MIC Kit]]: Tutorial at MICCAI 2008, New York City<br />
* September 10: [[Miccai_2008_Prostate_Workshop| Prostate image analysis and computer-assisted intervention]]: Workshop at MICCAI 2008, New York City<br />
* September 6: [[Miccai_2008_Systems_and_Architecture_Workshop| Systems & architecture for computer]] Workshop, MICCAI 2008, New York City<br />
* September 6: [[Miccai_2008_Segmentation_Workshop| Segmentation in the Clinic Challenge]]: Workshop at MICCAI 2008, New York City<br />
* September 3: [[Stanford_2008_Slicer_Workshop| Slicer Training]], Stanford University, CA<br />
----<br />
* August 21-22: [[Events:August2008XNATDesktop|Visit by WashU Developers to Boston for Discussions of XND]]<br />
* August 15: [[Events:NCI_Workshop_August_2008|August 15 2008, NA-MIC Workshop]], NCI<br />
* August 13-14: [[Events:August_2008_NCBC_AHM|NCBC all hands meeting]]<br />
* August 1: [[Events:August2008XNATDesktop| Planning TCon for XNAT Desktop Slicer interface]]<br />
----<br />
* July 30-August 1: [[2008_July_RFA_Experiment_Georgetown | RFA Interventional Experiment]], Georgetown University<br />
* July 17: Steve Pieper presented NA-MIC and Slicer Module development at the [http://www.ipam.ucla.edu/programs/mbi2008/ IPAM MBI] Summer School [[Media:Pieper-UCLA-MBI-2008-07-17.ppt|(Slides)]]<br />
* July 10 or 11: [[2008 July Slicer Introduction to Princess Margaret Hospital|Slicer Introduction]], Princess Margaret Hospital<br />
----<br />
* June 30: Steve Pieper presented at the [http://www.nitrc.org NITRC] all hands meeting.<br />
* June 26: [[2008_June_IGT_Tumor_Growth_Model_Demo_SPL|Tumor Growth Model Software Demo]], SPL<br />
* June 23-27: [[2008_Summer_Project_Week|'''Summer Project Week at MIT''']]<br />
* June 23: [[2008_July_Slicer_IGT_VV_Link_Session_II|Slicer IGT Integration with Brainlab via VVLink]]<br />
* June 16-17: [[2008 June Workshop Germany |Training Event]], Germany<br />
* March - June: [[3D_Ultrasound_Module_in_Slicer_3|Slicer IGT training for graduate students at SJTU, Shanghai, China (every Thursday 10 am - noon)]]<br />
----<br />
* May 22-23: [[2008_Core_1_Core_3_mtg|Cores 1-3 Technical Meeting]], Utah<br />
* May 21: [[2008_Core_1_UNC_Utah_DTI| Core 1 UNC & Utah Technical Meeting about DTI tool development]], Utah<br />
* May 21: Kilian Pohl presented on segmentation tools in 3D Slicer at the [http://www.dkfz.de/en/mbi/index.html Division of Medical and Biological Informatics, DKFZ, Germany] ([[media:Pohl_dkfz_08.pdf | Slides]]) <br />
* May 12: [[Events:May12_2008_FirstMondaySeminar | First Monday Seminar Talk given by Drs. Ichiro Sakuma and Nassir Navab]], Brigham and Women's Hospital, <br />
* May 8: [[Events:2008_05_08_Collaboration_UWA_Perth|Conference Call to Explore Collaboration with Adam Wittek]], UWA, Perth, Australia<br />
* May 2: [[2008_5_2_Hata_Talk_U_Michigan | Nobuhiko Hata's talk]], Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI<br />
----<br />
* April 14: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Slicer3_Workshop_UNC_Chapel_Hill_2008#Preparation_for_the_Workshop Full day Slicer 3 Users and Plug-in Workshop] hosted by UNC-Chapel Hill faculty<br />
* April 7: [[2008_David_Hawkes|2008 Dr. David Hawkes of UCL's visit to SPL]]<br />
----<br />
* March 31-April 11: [[2008_Platel_visit_from_TUE|2008 Dr. Platel's, IGT grp leader from Technical University Eindhoven, to SPL]]<br />
* March 24-27: [[2008_Engineering_review_at_Utah|2008 Engineering review]], Utah<br />
* March 19: [[Events:HST-563-March2008|Harvard-MIT Division of Health Sciences and Technology (HST), Lecture on Interventional MRI by Hata, Kikinis, HST 563]]<br />
* March 12: Steve Pieper presented on the NA-MIC Kit and 3D Slicer at the [http://www.cisst.org/wiki/Seminar_2008_03_12_3D_Slicer Johns Hopkins CISST] ([[media:Pieper-JHU-seminar-2008-03-12.ppt | Slides]])<br />
* March 10-11: [[IGT:March_2008_IGT_Workshop|IGT Workshop, Rockville, MD]]<br />
* Discussion of NA-MIC Kit for Cardiac EP with [http://www.bidmc.harvard.edu/cmr BIDMC].<br />
----<br />
* February 20: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Spring-2008-User-Training#Preparation_for_the_Workshop Spring 2008 Slicer3 User Training Workshop ] at the SPL 1249 Boylston St, Boston<br />
* February 5-7: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat Slicer3 Mini-Retreat, Boston]<br />
----<br />
* January 7-11: '''[[AHM_2008| AHM,]] [[2008_EAB|EAB,]] [[2008_Winter_Project_Week|Winter Project Week in Salt Lake City]]'''<br />
<br />
=== 2007 ===<br />
* December 12-14: [[2007_December_Slicer_IGT_Programming|Slicer IGT Programming Event]]<br />
----<br />
* November 2: [http://www.insightsoftwareconsortium.org/wiki/index.php/2007_MICCAI_Open_Workshop Third Annual Open Source Workshop at MICCAI]<br />
----<br />
* October 16-17: [http://nbirn.net/about/current/ahm2007.shtm BIRN AHM] Query Atlas and Qdec interfaces in Slicer 3 presented at the BIRN AHM.<br />
* October 14-20: [[2007_October_Collaboration_Visit_Robert_Israel|Robert Israel Collaboration Visit to the Surgical Planning Laboratory]]<br />
** [http://wiki.na-mic.org/Wiki/index.php/Slicer3:Module:QueryAtlas See this page] for links to QueryAtlas slides, movies and example datasets.<br />
** [http://wiki.na-mic.org/Wiki/index.php/Image:Slicer3QDEC_AHM2007.ppt See this page] for links to Qdec slides.<br />
* October 1-2: [[SanteFe.Tractography.Conference | Contrasting Tractography Methods Conference, Santa Fe]]<br />
----<br />
* September 12: [[Engineering:September 12, 2007 | Engineering End of Summer Meeting]]<br />
* September 11: [[GPU.Enabled.Tools.Meeting | GPU-enabling of NA-MIC Algorithms, Boston]]<br />
----<br />
* August 21: [[DBP2:UNC:Cortical Thickness Roadmap | UNC DBP Roadmap Tcon]]<br />
----<br />
* June 25-29: '''[[2007_Programming/Project_Week_MIT|Summer Project Week at MIT]]'''<br />
* June 9: [[Training:OHBM2007_Training_Workshop|OHBM DTI Training Workshop, Chicago]]<br />
* June 1: [[2007_Pohl_at_CCB|Pohl Talk]], CCB: A Hierarchical Segmentation Algorithm for MR Brain Images<br />
----<br />
* May 29-31: [[2007_Core_1_Meeting|Annual Core 1 Workshop]], Boston<br />
----<br />
* April 24: Steve Pieper presented Slicer3 and the NA-MIC Kit to the [http://gray.mgh.harvard.edu/content/index.php Medical Physics group at MGH] [http://wiki.na-mic.org/Wiki/images/9/9c/Pieper-MGH-medical-physics-2007-04-24.ppt (slides)]<br />
----<br />
* March 29-30: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat_March_29%2C_30%2C_2007 Slicer3 Mini-Retreat], Boston<br />
----<br />
* February 21-22: Vince Calhoun from MIND is visiting at MIT and MGH [http://www.csail.mit.edu/events/eventcalendar/calendar.php?show=event&id=1349 Talk announecement]<br />
* February 3 and 10: [http://mri.radiology.uiowa.edu/mediawiki/index.php/ITK_Programming_Short_Course_-_Feb_2007 Iowa ITK Programming Short Course]<br />
* February 7-8: [http://www.slicer.org/slicerWiki/index.php/Slicer3:MiniRetreat Slicer3 Mini-Retreat], Boston<br />
----<br />
* January 29: [[P41-2007-Joint-Retreat | CFIT NAC P41 2007 Joint Retreat]]<br />
* January 16: [[2007-01-16 Core 5, Core 6 Summit]]<br />
* January 10-12: '''[[AHM_2007|AHM, EAB, Winter Project Half Week in Salt Lake City]]'''<br />
<br />
=== 2006 ===<br />
* December 12: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Alpha-release Slicer3 retreat], Kitware, Inc.<br />
----<br />
* November 15: [http://www.slicer.org/slicerWiki/index.php/Slicer3:Usability Usability session with PNL], BWH]<br />
* November 7-8: [[2006_November_Meshing_Project_Visit| Meshing Collaborator Project Visit to BWH]]<br />
* November 1: [[Training:User_Workshop_Fall_HCNR_2006| NA-MIC Training Workshop at the Harvard Center for Neurodegeneration and Repair]], Boston<br />
----<br />
* October 26: [[Oct-26-2006-MIND-visit_Visiting_the_MIND_institute|New DBP MIND Institute Visit]]<br />
* October 23-26: [http://www.nbirn.net/press/current/ahm2006.shtm <nowiki>| BIRN All Hands Meeting</nowiki>]<br />
* October 19-20: [[IGT:October_2006_IGT_Workshop| NCIGT Workshop on Open System Architectures for Image-Guided Therapy]]<br />
* October 17: [[Core1-3-meeting-2006|Coordination meeting]] between Core 1 and Core 3 to plan the specifics for the third and last year of the current DBP's<br />
* October 1: [http://www.insightsoftwareconsortium.org/wiki/index.php/2006_MICCAI_Open_Workshop MICCAI_2006 Open Source Workshop], MICCAI 2006, Copenhagen, Denmark<br />
----<br />
* September 19-20: [[2006_September_Slicer3_Update| Slicer 3 Update Meeting]], Boston, MA<br />
* September 14-15: We have been invited to participate in [http://usms.nist.gov/workshops/bioimaging.htm NIH Workshop on Standards in Change Measurement]. This workshop will potentially set the stage for additional workshops that focus on Image Guided Interventions and Open Source standards.<br />
* September 6: [http://www.ibmisps.org/pdf/InformationparticipantsANGLAIS.pdf 2006 IBMISPS conference:] [[Media:Kikinis-IBMISPS-09-06-2006.ppt|talk]] by [[media:Kikinis-FOSS.ppt|R. Kikinis on FOSS]] ([[2006 FOSS Abstract Kikinis]])<br />
----<br />
* July 19: [[Training:NLM_Workshop_2006| NA-MIC Training Workshop]], NLM<br />
* July 17-19: [[NIH:_2006_All_NCBC_Meeting| All NCBC All Hands Meeting, NLM<br />
* July 13-14: [http://bsp.csie.nctu.edu.tw/lssa06/ 2nd IEEE-NLM International Life Science Systems and Applications Workshop, Lister Hill Auditorium, NIH, chaired by Stephen Wong, co-sponsored by IEEE, NLM, and NAMIC]<br />
* July 2: Ron Kikinis [[Media:NA-MIC-Kit-07-01-2006.ppt| presentation]] (28MB ppt file) at the [http://www.future-cad.org/fcad/Docs/CFP_for_2nd_Int_Sympo_2006_ver3.2.pdf The 2nd International Symposium on Intelligent Assistance in Diagnosis of Multi-Dimensional Medical Images ]<br />
----<br />
* June 26-30: '''[[2006_Programming/Project_Week_MIT|Summer Project Week at MIT]]'''<br />
* June 8-9: [[Georgia_Tech_visit_to_UNC%2C_June_8-9|Georgia Tech visit to UNC: Shape Analysis Discussion]]<br />
* June 5: [http://www.slicer.org/slicerWiki/index.php/Slicer:Slicer3-June-5-2006-Retreat Slicer 3 Retreat]<br />
----<br />
* May 30: [http://www.cimit.org/forum/forum.html CIMIT Forum] with Steve Pieper and Luis Ibanez ([[Media:CIMIT-BIRN-update-2006-05-30.ppt| Steve's Slides]])([[Media:CIMIT-2006-IGSTK-InsightJournal.ppt| Luis' Slides]])<br />
* May 26: [[Training:DTI_Workshop|UNC-Chapel Hill NA-MIC DTI Analysis Training Workshop]]<br />
* May 23-24: [[Algorithms:Core1Visit_May06| NA-MIC Core 1 meeting]], UNC]]<br />
* May 19: [[Slicer:StevePieper_RonKikinis_VisitToDartmouth_051906|Steve Pieper and Ron Kikinis Visit to Dartmouth]]<br />
* May 15: [[DBP:Harvard:Collaboration:GTech#Progress|Delphine Nain]], PNL<br />
----<br />
* April 27: [[Training:NIH_Workshop_2006|NA-MIC Training Workshop]], NIH<br />
* April 24: [http://www.nimh.nih.gov/neuroinformatics/springagenda2006.cfm The Human Brain Project: Linking Within and Beyond] Natcher Conference Center, NIH Campus, Bethesda, Maryland: National Alliance for Medical Image Computing: Science & Technology of One National Center for Biomedical Computing [[Media:NA-MIC_Kit_revised.ppt| (this is a slightly modified version of the presentation)]]<br />
* April 12-13: [[DBP:Harvard:Collaboration:Toronto|James Kennedy and Aristotle Voineskos at the PNL]]<br />
* April 10-11: [[Training:MIND_Institute_Workshop_Spring_2006| NA-MIC Training Workshop]], MIND Institute, NM<br />
* April 10-11: Steve Pieper presented the NA-MIC Kit at [http://www.biomedicalimaging.org ISBI] 2006 on April 7, 2006 ([[Media:NA-MIC-2006-04-07-ISBI.ppt| Slides]], [[Media:Pieper-ISBI-2006-revised.pdf| Paper]]).<br />
* April 3-4: [http://www.slicer.org/slicerWiki/index.php/Slicer3:_Alpha1_Meeting Design Review and Work meeting on Slicer3 (alpha1 release)]<br />
----<br />
* February 22-24: [[Engineering:Slicer3_and_GPU| Meeting at Kitware to discuss Slicer3 (Thursday) and GPU programming (Friday)]]<br />
* February 22: [[DBP:Sylvain_Doug_visit_Dartmouth_Feb_22_2006|Sylvain Bouix to visit Dartmouth]]<br />
* February 20-23: [[IGT:Workshop_Feb_2006|IGT and FUS Workshops]]<br />
----<br />
* January 24: [[Training:User_Workshop_SPL_Winter_HCNR_2005| HCNR User Training Workshop]], Surgical Planning Laboratory, Boston, MA<br />
* January 8-13: '''[[AHM_2006:AHM_2006| AHM, EAB, Winter Project Week in Salt Lake City]]'''<br />
<br />
=== 2005 ===<br />
* December 20: [[DBP:Marek_Kubicki_visit_Dartmouth_December_20_2005| Marek Kubicki visit to Dartmouth]]<br />
* December 17: [[Collaboration:GT-UCI| Jim Fallon from UC Irvine visit to Georgia Tech for work on Rule-Based Segmentation]]<br />
* December 14: [[DBP:Andy_Saykin_visit_BWH_December_14_2005|Andy Saykin and Group visit to Brigham and Women's Hospital]]<br />
* December 1: [[DBP:Dartmouth_Harvard_Slicer_Training_12_01_2005| Dartmouth Group Slicer Training Followup at Harvard]], 1249 Boylston St., Boston, MA<br />
----<br />
* November 27-December 2: [http://rsna2005.rsna.org/rsna2005/V2005/index.cvn RSNA 2005, Chicago: Slicer session], Open source imaging tools workshop<br />
* November 18: [[DBP:Harvard:Collaboration:GTech#Progress|Ramsey Al-Hakim at the PNL]]<br />
* November 17-18: [[Collaboration:GT-Kitware|John Melonakos at Kitware -- Bayesian Classification Filter addition to ITK]]<br />
* November 16: [[IGT:2005_Nov_16_IGT_Consortium_Kickoff| IGT Consortium Kickoff]]<br />
* November 16: [[Collaboration:UNC-UCI|Jim Fallon and Martina from UC Irvine visit to UNC on DTI tools and clinical projects]]<br />
* November 15: [[Engineering:Slicer3.0_November_15_2005| Slicer 3.0 Meeting]], Surgical Planning Laboratory, Boston, MA<br />
----<br />
* October 29: [[Dissemination:MICCAI_Workshop_2005|ISC and NA-MIC Workshop on Open Source Toolkits, Applications, and their uses in Medical Image Analysis]], MICCAI 2005, Palm Springs, CA<br />
* October 29: Informal NA-MIC Lunch, MICCAI 2005, Palm Springs, CA<br />
* October 20: [[2005_AHM:_3D_Slicer/Freesurfer_Workshop|Slicer Training Workshop, AHM BIRN]], San Diego, CA<br />
* October 7: [[Collaboration:UNC-PNL|UNC visit at the Psychiatry NeuroImaging Laboratory]]<br />
* October 5-7: [[Dissemination:EPFL_Workshop_2005| Advanced ITK and Slicer Workshop]], Swiss Federal Institute of Technology (EPFL), Lausanne, Switzerland<br />
----<br />
* September 30: [[Training:User_Workshop_SPL_Fall_2005|User Training Workshop]], Surgical Planning Laboratory, Boylston St, Boston, MA<br />
* September 26-28: [[Engineering:Core_3_Programming_Week#1_Feedback|DBP and Engineering Session on Feedback from Programming Week Projects, and Planning the next 6-months]]<br />
* September 16: [[Training:User_Workshop_MGH_Summer_2005| User Training Workshop]], MGH<br />
----<br />
* August 11: [[Dissemination:CSB2005|Invited Lecture about NA-MIC]]<br />
----<br />
* July 20: [[Collaboration:Workshop_July_20_2005|UNC visit of Georgia Tech for collaborative work on shape and DTI algorithms]]<br />
----<br />
* June 27-July 1: [[Engineering:Programmers_Week_Summer_2005| '''Summer Project Week at MIT''']]<br />
* June 22-23: [[Dissemination:NCRR_NIBIB_PI_Meeting_June_22-23_2005|NCRR/NIBIB PI Meeting]]<br />
* June 16-19: [[Collaboration:Workshop_June_16-19_2005|Georgia Tech visit of UC-Irvine for collaborative work on anatomically accurate algorithms.]]<br />
----<br />
* May 26-27: [[Dissemination:Workshop_May_26-27_2005|User Training and Dissemination Workshop]], at Dartmouth<br />
----<br />
* April 21-22: [[DBP:Andy_Saykin_visit_BWH_April_21_2005| Andy Saykin visit to Brigham and Women's Hospital and MIT]]<br />
----<br />
* March 25: University of Utah visit of Harvard VA for collaborative work on DTMRI.<br />
* March 21-23: [[FBIRN:retreat2005|fBIRN Retreat in Irvine with User Tutorials for Slicer, Brains2 Wednesday on March 23]]<br />
----<br />
* February 20-22: [[AHM_2005:Main|'''The First All-Hands-Meeting and Programming Event in Salt Lake City, Utah''']]<br />
* February 17-18: [[Dissemination:Workshop_Feb17-18_2005| Dissemination Workshop]], UCSD]]<br />
----<br />
* January 26: Slicer User Workshop at BWH: [http://www.slicer.org/slicerWiki/index.php/Slicer:User_Workshop_Jan26 Information for Atendees]<br />
* January 24-25: Dissemination Workshop at [[Dissemination:Workshop_Jan24-25_Boston|Agenda]], [[Dissemination:Workshop_Jan2005_Interested_Attendee_List|List of Participants]], [[Talk:Dissemination:Workshop_Jan24-25_Boston_Feedback|Attendee Feedback]]<br />
* January 17-18: [http://www.imaginggenetics.uci.edu First International Imaging Genetics Conference] at the Beckman Center of the National Academy of Sciences in Irvine, CA.<br />
<br />
=== 2004 ===<br />
<br />
* December 9-10: Dissemination Workshop in the Surgical Planning Laboratory, BWH: [[Dissemination:Workshop_Dec9-10_Boston|Agenda]], [[Dissemination:Workshop_Dec9-10_Boston_Presentations|Presentations]], [[Dissemination:Workshop_Dec9:10_Attendees_List|List of Participants]], [[Dissemination:Workshop_Dec9:10_Summary|Summary]], [[Talk:Dissemination:Workshop_Dec9-10_Boston_Feedback|Attendee Feedback]]<br />
----<br />
* November 16: Dissemination Meeting: [[Dissemination:Kickoff_Agenda|Agenda]], [[Dissemination:Kickoff_Summary|Summary]]<br />
----<br />
* October 15: [[Kickoff:Main| NA-MIC Kickoff Meeting]]</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week/SliceTracker&diff=934742016 Summer Project Week/SliceTracker2016-06-25T15:52:54Z<p>Kikinis: </p>
<hr />
<div>==Key Investigators==<br />
* Christian Herz (BWH)<br />
* Peter Behringer (Basler AG)<br />
* Andriy Fedorov (BWH)<br />
<br />
==Project Description==<br />
<br />
Slicetracker is a Slicer extension which focuses on tracking the prostate during MR-guided prostate biopsies. <br />
It combines registration of the prostate in pre-procedural and intra-procedural images which improves the chance to find the exact same target position in intra-procedural images.<br />
<br />
Furthermore a so called z-Frame registration is included for correlating the patient and 3D Slicers coordinate system. For guidance of the needle a template grid with 15x14 holes is placed in front of the z-Frame. The optimal hole is computed for inserting the needle and obtaining the tissue sample.<br />
<br />
{| class="wikitable"<br />
! style="text-align: left; width:27%" | Objective<br />
! style="text-align: left; width:27%" | Approach and Plan<br />
! style="text-align: left; width:27%" | Progress and Next Steps<br />
|- style="vertical-align:top;"<br />
|<br />
<!-- Objective bullet points --><br />
* Use SliceTracker currently used in shadow mode + collecting feedback from Kemal about usability<br />
** At least 5 cases in a row which has to run without having any issues, then production use<br />
* Integration of [https://github.com/SlicerProstate/SliceTracker/tree/master/ZFrameCalibration Z-Frame registration]<br />
* Calculation of template hole and depth to apply for reaching targets<br />
|<br />
<!-- Approach and Plan bullet points --><br />
* Discussions and feedback about usability and improvements<br />
|<br />
<!-- Progress and Next steps bullet points (fill out at the end of project week) --><br />
* Discussions about implementing SliceTracker as a Slicelet (this will prevent users from making mistakes/pushing wrong buttons etc.)<br />
* Next Steps:<br />
** Will soon run in production mode replacing the "old" Slicer 3 cart<br />
** As soon as it is in its final state: create extension<br />
|}<br />
<br />
==Background and References==<br />
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --><br />
<br />
[[File:Slicetracker.gif]]<br />
<br />
<br />
SliceTracker code: https://github.com/SlicerProstate/SliceTracker<br />
<br />
Previous project week resources:<br />
* Winter 2015: http://www.na-mic.org/Wiki/index.php/ProstateNavigation_workflow<br />
* Summer 2015: http://www.na-mic.org/Wiki/index.php/2015_Refinement_Registration_Module<br />
* Winter 2016: http://www.na-mic.org/Wiki/index.php/2016_Winter_Project_Week/Projects/SliceTracker</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=933892016 Summer Project Week2016-06-25T07:25:21Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please fill in the survey about project weeks today!</font><br />
<br />
<font size="5"><br />
[https://hms.az1.qualtrics.com/jfe/form/SV_6gK6BFe4Ivfo9RH click here]<br />
</font><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please hold January 9-13, 2017 for Project Week#24 at MIT. </font><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please hold June 16-24 for Project Week#25 in Europe. It will be either right before IPCAI (i.e June ~16-20) or right after CARS! (~June 25-29)</font><br />
<br />
<br><br><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5"> Please add photos from this week here: https://goo.gl/photos/Dhx6Fdei27NZe2rX9<br />
<br />
<br><br><br />
<br />
</font><br />
<br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> [https://goo.gl/maps/e3ZbcsM5KC82 DKFZ]<br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS, Room Trübnersaal <br />
|-<br />
|bgcolor="#ffffdd"|'''9:00am-10:00am'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[{{FULLPAGENAME}}/Workshop_on_Shared_Software_Platform_for_Ultrasound-Guided_Medical_Interventions|Workshop: Ultrasound-guided interventions software platform (all day)]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| 10:30am-12pm: Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD) <br />
|bgcolor="#ffffff"| [[{{FULLPAGENAME}}/Breakout Session Slicer Extensions|Breakout Session: Slicer Extensions]] (JC, Steve)<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Projects'''=<br />
<br />
<br />
<br />
* Note: Please use this [[2016_Summer_Project_Week_Template | template]] to create project pages<br />
<br />
=== Worldwide Ultrasound Navigation ===<br />
Over the last several PWs, an international group has emerged for collaborative specification and development of ultrasound-based navigation for surgical and interventional radiology applications. This group represents the leadership of ultrasound navigation technology from Queens University (PLUS library: Andras Lasso, Tamas Ungi, Csaba Pinter, Gabor Fichtinter), Montreal Neurologic Institute (Simon Drouin), Brigham and Women's Hospital/HMS (William Wells, Steve Pieper, Sarah Frisken), Robarts University (Adam Rankin), Trondheim University and SINTEF (CustusX: Christian Askeland, Frank Lindseth).<br />
<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
<br />
=== Simplified Human-Computer Interactions for Intra-Operative Usage===<br />
This theme focuses on infrastructure for simplified human-computer interactions for intra-operative usage. This includes Guidelets, simplified graphical user interfaces that can access the same backend as 3D Slicer; as well as interfaces for virtual reality/augmented reality devices from the consumer market that are that are improving by leaps and bounds and show promise for surgical use.<br />
<br />
* [[2016 Summer Project Week/Guidelets | Guidelets (Slicelets for IGT)]] (Tamas Ungi, Andras Lasso, Thomas Vaughan)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper, Anna Roethe)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin, Andras Lasso)<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (David García, Javier Pascau)<br />
* [[2016 Summer Project Week/Auditory Display | Auditory Display Integration]] (David Black, Sarah Frisken, Christian Hansen, Longquan Chen)<br />
<br />
===Machine Learning for IGT===<br />
This theme applies concepts from machine learning to image-guided therapy, including the application of convolutional neural networks for segmentation of mechanically implanted devices during surgery, and the use of Gaussian processes for estimation of uncertainty in image-fusion.<br />
<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Tina Kapur)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, Christian Hansen, William Wells)<br />
<br />
===IGT Other===<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Yannick Suter, Lauren J. O'Donnell)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Rocío López, Javier Pascau, Tamas Ungi)<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI to aid Deep Brain Stimulation]] (Fernando Pérez García)<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Intraoperative Imaging workflow in Hybrid ORs | Intraoperative Imaging in Hybrid ORs]] (Prashin Unadkat, Sarah Frisken, Anna Roethe, Christian Hansen)<br />
<br />
=== Informatics ===<br />
This theme deals with creating data formats to enable medical image informatics. Led by the [http://qiicr.org/about.html QIICR project], the results will be made available in the DICOM for Quantitative Imaging (DCMQI) Library for sharing quantitative image-processing results in a standardized way. <br />
<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter, Andras Lasso, Marco Nolden, Christian Herz)<br />
<br />
=== Infrastructure ===<br />
Improvements to the core functionality of widely used open source tools is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Lauren O'Donnell, Isaiah Norton, Michael Onken)<br />
* [[2016 Summer Project Week/Curve and Surface Creation from Fiducials|Curve and Surface Creation from Fiducials]] (Thomas Vaughan, Junichi Tokuda)<br />
* [[2016 Summer Project WEB and 3D DICOM viewer to the rest of us]] (Koji Kobayashi, Steve Pieper)<br />
<br />
=== Tutorial===<br />
Creation of tutorials and documentation is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/SlicerDMRIDocumentation | Tutorials and Documentations in SlicerDMRI]] (Lauren J. O'Donnell, Fan Zhang, Isaiah Norton)<br />
* [[2016 Summer Project Week/UniversityCourse | Create the basics of a university course about medical image computing]] (Attila Nagy)<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
==Location==<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Getting to Heidelberg:''' Most will fly into Frankfurt Main International (FRA). At the airport look for "long distance trains". There you can buy a ticket from the machine to Heidelberg Hauptbahnhof (main station), around EUR 25. It usually takes less than an hour, with a change in Mannheim to a regional train. https://www.bahn.de . If you arrive on Sunday you can take a bus from the station to the Old Town or where your hotel is. Heidelberg is pretty small, look for directions on Google Maps. If you arrive on Monday see below on how to get to DKFZ directly.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
*** Enter through the main lobby ( just north of https://goo.gl/maps/e3ZbcsM5KC82, you can't miss it, it's the tallest building on campus with a big "dkfz." on top). The meeting room is on the 8th floor (H824, "Glaskasten", "glass box"). We will leave some instructions how to get there at the reception. The meeting time in the lobby will be 8:45am for those who wish to be at the meeting room by 9am. Official activities will start at noon with lunch.<br />
*** To get to DKFZ in the morning you can use the Google Maps link above, public transport information is available there. For people staying in the Old Town, near Bismarckplatz or coming from the station it will be most likely Bus #32, exit at stop "Chirurgische Klinik", which is the second one after crossing the Neckar river. More detailed timetables at [http://fahrplanauskunft.vrn.de/vrn/XSLT_TRIP_REQUEST2?language=en the local transportation services VRN]. If you are up early there is also a nice [https://goo.gl/maps/SRRG6x7KDNU2 walk along the river].<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
***Suggested place for meetings is the Marstall student center ([https://www.google.de/maps/place/Zeughaus-Mensa+im+Marstall/@49.4124525,8.7056926,349m/data=!3m1!1e3!4m5!3m4!1s0x0000000000000000:0x8fd41be2e27fc36e!8m2!3d49.412919!4d8.7044381 map])<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
==Preparatory Conference Calls: ==<br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
=='''Equipment'''==<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]] '''Updated June 16 2016'''<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA and University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS (Mon)<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Marco Nolden, [http://mbi.dkfz-heidelberg.de Medical and Biological Informatics, German Cancer Research Center] (Mon)<br />
# Christian Hansen, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Julian Hettig, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Jorge Onieva, BWH/HMS, Boston<br />
# Caspar Goch, German Cancer Research Center (Mon)<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=933872016 Summer Project Week2016-06-25T07:21:27Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please fill in the survey about project weeks today!</font><br />
<br />
<font><br />
[https://hms.az1.qualtrics.com/jfe/form/SV_6gK6BFe4Ivfo9RH click here]<br />
</font><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please hold January 9-13, 2017 for Project Week#24 at MIT. </font><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please hold June 16-24 for Project Week#25 in Europe. It will be either right before IPCAI (i.e June ~16-20) or right after CARS! (~June 25-29)</font><br />
<br />
<br><br><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5"> Please add photos from this week here: https://goo.gl/photos/Dhx6Fdei27NZe2rX9<br />
<br />
<br><br><br />
<br />
</font><br />
<br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> [https://goo.gl/maps/e3ZbcsM5KC82 DKFZ]<br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS, Room Trübnersaal <br />
|-<br />
|bgcolor="#ffffdd"|'''9:00am-10:00am'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[{{FULLPAGENAME}}/Workshop_on_Shared_Software_Platform_for_Ultrasound-Guided_Medical_Interventions|Workshop: Ultrasound-guided interventions software platform (all day)]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| 10:30am-12pm: Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD) <br />
|bgcolor="#ffffff"| [[{{FULLPAGENAME}}/Breakout Session Slicer Extensions|Breakout Session: Slicer Extensions]] (JC, Steve)<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Projects'''=<br />
<br />
<br />
<br />
* Note: Please use this [[2016_Summer_Project_Week_Template | template]] to create project pages<br />
<br />
=== Worldwide Ultrasound Navigation ===<br />
Over the last several PWs, an international group has emerged for collaborative specification and development of ultrasound-based navigation for surgical and interventional radiology applications. This group represents the leadership of ultrasound navigation technology from Queens University (PLUS library: Andras Lasso, Tamas Ungi, Csaba Pinter, Gabor Fichtinter), Montreal Neurologic Institute (Simon Drouin), Brigham and Women's Hospital/HMS (William Wells, Steve Pieper, Sarah Frisken), Robarts University (Adam Rankin), Trondheim University and SINTEF (CustusX: Christian Askeland, Frank Lindseth).<br />
<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
<br />
=== Simplified Human-Computer Interactions for Intra-Operative Usage===<br />
This theme focuses on infrastructure for simplified human-computer interactions for intra-operative usage. This includes Guidelets, simplified graphical user interfaces that can access the same backend as 3D Slicer; as well as interfaces for virtual reality/augmented reality devices from the consumer market that are that are improving by leaps and bounds and show promise for surgical use.<br />
<br />
* [[2016 Summer Project Week/Guidelets | Guidelets (Slicelets for IGT)]] (Tamas Ungi, Andras Lasso, Thomas Vaughan)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper, Anna Roethe)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin, Andras Lasso)<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (David García, Javier Pascau)<br />
* [[2016 Summer Project Week/Auditory Display | Auditory Display Integration]] (David Black, Sarah Frisken, Christian Hansen, Longquan Chen)<br />
<br />
===Machine Learning for IGT===<br />
This theme applies concepts from machine learning to image-guided therapy, including the application of convolutional neural networks for segmentation of mechanically implanted devices during surgery, and the use of Gaussian processes for estimation of uncertainty in image-fusion.<br />
<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Tina Kapur)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, Christian Hansen, William Wells)<br />
<br />
===IGT Other===<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Yannick Suter, Lauren J. O'Donnell)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Rocío López, Javier Pascau, Tamas Ungi)<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI to aid Deep Brain Stimulation]] (Fernando Pérez García)<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Intraoperative Imaging workflow in Hybrid ORs | Intraoperative Imaging in Hybrid ORs]] (Prashin Unadkat, Sarah Frisken, Anna Roethe, Christian Hansen)<br />
<br />
=== Informatics ===<br />
This theme deals with creating data formats to enable medical image informatics. Led by the [http://qiicr.org/about.html QIICR project], the results will be made available in the DICOM for Quantitative Imaging (DCMQI) Library for sharing quantitative image-processing results in a standardized way. <br />
<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter, Andras Lasso, Marco Nolden, Christian Herz)<br />
<br />
=== Infrastructure ===<br />
Improvements to the core functionality of widely used open source tools is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Lauren O'Donnell, Isaiah Norton, Michael Onken)<br />
* [[2016 Summer Project Week/Curve and Surface Creation from Fiducials|Curve and Surface Creation from Fiducials]] (Thomas Vaughan, Junichi Tokuda)<br />
* [[2016 Summer Project WEB and 3D DICOM viewer to the rest of us]] (Koji Kobayashi, Steve Pieper)<br />
<br />
=== Tutorial===<br />
Creation of tutorials and documentation is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/SlicerDMRIDocumentation | Tutorials and Documentations in SlicerDMRI]] (Lauren J. O'Donnell, Fan Zhang, Isaiah Norton)<br />
* [[2016 Summer Project Week/UniversityCourse | Create the basics of a university course about medical image computing]] (Attila Nagy)<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
==Location==<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Getting to Heidelberg:''' Most will fly into Frankfurt Main International (FRA). At the airport look for "long distance trains". There you can buy a ticket from the machine to Heidelberg Hauptbahnhof (main station), around EUR 25. It usually takes less than an hour, with a change in Mannheim to a regional train. https://www.bahn.de . If you arrive on Sunday you can take a bus from the station to the Old Town or where your hotel is. Heidelberg is pretty small, look for directions on Google Maps. If you arrive on Monday see below on how to get to DKFZ directly.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
*** Enter through the main lobby ( just north of https://goo.gl/maps/e3ZbcsM5KC82, you can't miss it, it's the tallest building on campus with a big "dkfz." on top). The meeting room is on the 8th floor (H824, "Glaskasten", "glass box"). We will leave some instructions how to get there at the reception. The meeting time in the lobby will be 8:45am for those who wish to be at the meeting room by 9am. Official activities will start at noon with lunch.<br />
*** To get to DKFZ in the morning you can use the Google Maps link above, public transport information is available there. For people staying in the Old Town, near Bismarckplatz or coming from the station it will be most likely Bus #32, exit at stop "Chirurgische Klinik", which is the second one after crossing the Neckar river. More detailed timetables at [http://fahrplanauskunft.vrn.de/vrn/XSLT_TRIP_REQUEST2?language=en the local transportation services VRN]. If you are up early there is also a nice [https://goo.gl/maps/SRRG6x7KDNU2 walk along the river].<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
***Suggested place for meetings is the Marstall student center ([https://www.google.de/maps/place/Zeughaus-Mensa+im+Marstall/@49.4124525,8.7056926,349m/data=!3m1!1e3!4m5!3m4!1s0x0000000000000000:0x8fd41be2e27fc36e!8m2!3d49.412919!4d8.7044381 map])<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
==Preparatory Conference Calls: ==<br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
=='''Equipment'''==<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]] '''Updated June 16 2016'''<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA and University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS (Mon)<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Marco Nolden, [http://mbi.dkfz-heidelberg.de Medical and Biological Informatics, German Cancer Research Center] (Mon)<br />
# Christian Hansen, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Julian Hettig, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Jorge Onieva, BWH/HMS, Boston<br />
# Caspar Goch, German Cancer Research Center (Mon)<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=933862016 Summer Project Week2016-06-25T07:20:30Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
<br />
<font color="maroon">Please fill in the survey about project weeks today!</font><br />
<br />
<font><br />
[https://hms.az1.qualtrics.com/jfe/form/SV_6gK6BFe4Ivfo9RH click here]<br />
</font><br />
<br />
<br><br><br />
<br />
<font color="maroon">Please hold January 9-13, 2017 for Project Week#24 at MIT. </font><br />
<br />
<br><br><br />
<br />
<font color="maroon" size="5">Please hold June 16-24 for Project Week#25 in Europe. It will be either right before IPCAI (i.e June ~16-20) or right after CARS! (~June 25-29)</font><br />
<br />
<br><br><br />
<br />
<br><br><br />
<br />
<font color="maroon"> Please add photos from this week here: https://goo.gl/photos/Dhx6Fdei27NZe2rX9<br />
<br />
<br><br><br />
<br />
</font><br />
<br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> [https://goo.gl/maps/e3ZbcsM5KC82 DKFZ]<br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS, Room Trübnersaal <br />
|-<br />
|bgcolor="#ffffdd"|'''9:00am-10:00am'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[{{FULLPAGENAME}}/Workshop_on_Shared_Software_Platform_for_Ultrasound-Guided_Medical_Interventions|Workshop: Ultrasound-guided interventions software platform (all day)]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| 10:30am-12pm: Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD) <br />
|bgcolor="#ffffff"| [[{{FULLPAGENAME}}/Breakout Session Slicer Extensions|Breakout Session: Slicer Extensions]] (JC, Steve)<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Projects'''=<br />
<br />
<br />
<br />
* Note: Please use this [[2016_Summer_Project_Week_Template | template]] to create project pages<br />
<br />
=== Worldwide Ultrasound Navigation ===<br />
Over the last several PWs, an international group has emerged for collaborative specification and development of ultrasound-based navigation for surgical and interventional radiology applications. This group represents the leadership of ultrasound navigation technology from Queens University (PLUS library: Andras Lasso, Tamas Ungi, Csaba Pinter, Gabor Fichtinter), Montreal Neurologic Institute (Simon Drouin), Brigham and Women's Hospital/HMS (William Wells, Steve Pieper, Sarah Frisken), Robarts University (Adam Rankin), Trondheim University and SINTEF (CustusX: Christian Askeland, Frank Lindseth).<br />
<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
<br />
=== Simplified Human-Computer Interactions for Intra-Operative Usage===<br />
This theme focuses on infrastructure for simplified human-computer interactions for intra-operative usage. This includes Guidelets, simplified graphical user interfaces that can access the same backend as 3D Slicer; as well as interfaces for virtual reality/augmented reality devices from the consumer market that are that are improving by leaps and bounds and show promise for surgical use.<br />
<br />
* [[2016 Summer Project Week/Guidelets | Guidelets (Slicelets for IGT)]] (Tamas Ungi, Andras Lasso, Thomas Vaughan)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper, Anna Roethe)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin, Andras Lasso)<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (David García, Javier Pascau)<br />
* [[2016 Summer Project Week/Auditory Display | Auditory Display Integration]] (David Black, Sarah Frisken, Christian Hansen, Longquan Chen)<br />
<br />
===Machine Learning for IGT===<br />
This theme applies concepts from machine learning to image-guided therapy, including the application of convolutional neural networks for segmentation of mechanically implanted devices during surgery, and the use of Gaussian processes for estimation of uncertainty in image-fusion.<br />
<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Tina Kapur)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, Christian Hansen, William Wells)<br />
<br />
===IGT Other===<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Yannick Suter, Lauren J. O'Donnell)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Rocío López, Javier Pascau, Tamas Ungi)<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI to aid Deep Brain Stimulation]] (Fernando Pérez García)<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Intraoperative Imaging workflow in Hybrid ORs | Intraoperative Imaging in Hybrid ORs]] (Prashin Unadkat, Sarah Frisken, Anna Roethe, Christian Hansen)<br />
<br />
=== Informatics ===<br />
This theme deals with creating data formats to enable medical image informatics. Led by the [http://qiicr.org/about.html QIICR project], the results will be made available in the DICOM for Quantitative Imaging (DCMQI) Library for sharing quantitative image-processing results in a standardized way. <br />
<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter, Andras Lasso, Marco Nolden, Christian Herz)<br />
<br />
=== Infrastructure ===<br />
Improvements to the core functionality of widely used open source tools is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Lauren O'Donnell, Isaiah Norton, Michael Onken)<br />
* [[2016 Summer Project Week/Curve and Surface Creation from Fiducials|Curve and Surface Creation from Fiducials]] (Thomas Vaughan, Junichi Tokuda)<br />
* [[2016 Summer Project WEB and 3D DICOM viewer to the rest of us]] (Koji Kobayashi, Steve Pieper)<br />
<br />
=== Tutorial===<br />
Creation of tutorials and documentation is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/SlicerDMRIDocumentation | Tutorials and Documentations in SlicerDMRI]] (Lauren J. O'Donnell, Fan Zhang, Isaiah Norton)<br />
* [[2016 Summer Project Week/UniversityCourse | Create the basics of a university course about medical image computing]] (Attila Nagy)<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
==Location==<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Getting to Heidelberg:''' Most will fly into Frankfurt Main International (FRA). At the airport look for "long distance trains". There you can buy a ticket from the machine to Heidelberg Hauptbahnhof (main station), around EUR 25. It usually takes less than an hour, with a change in Mannheim to a regional train. https://www.bahn.de . If you arrive on Sunday you can take a bus from the station to the Old Town or where your hotel is. Heidelberg is pretty small, look for directions on Google Maps. If you arrive on Monday see below on how to get to DKFZ directly.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
*** Enter through the main lobby ( just north of https://goo.gl/maps/e3ZbcsM5KC82, you can't miss it, it's the tallest building on campus with a big "dkfz." on top). The meeting room is on the 8th floor (H824, "Glaskasten", "glass box"). We will leave some instructions how to get there at the reception. The meeting time in the lobby will be 8:45am for those who wish to be at the meeting room by 9am. Official activities will start at noon with lunch.<br />
*** To get to DKFZ in the morning you can use the Google Maps link above, public transport information is available there. For people staying in the Old Town, near Bismarckplatz or coming from the station it will be most likely Bus #32, exit at stop "Chirurgische Klinik", which is the second one after crossing the Neckar river. More detailed timetables at [http://fahrplanauskunft.vrn.de/vrn/XSLT_TRIP_REQUEST2?language=en the local transportation services VRN]. If you are up early there is also a nice [https://goo.gl/maps/SRRG6x7KDNU2 walk along the river].<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
***Suggested place for meetings is the Marstall student center ([https://www.google.de/maps/place/Zeughaus-Mensa+im+Marstall/@49.4124525,8.7056926,349m/data=!3m1!1e3!4m5!3m4!1s0x0000000000000000:0x8fd41be2e27fc36e!8m2!3d49.412919!4d8.7044381 map])<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
==Preparatory Conference Calls: ==<br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
=='''Equipment'''==<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]] '''Updated June 16 2016'''<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA and University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS (Mon)<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Marco Nolden, [http://mbi.dkfz-heidelberg.de Medical and Biological Informatics, German Cancer Research Center] (Mon)<br />
# Christian Hansen, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Julian Hettig, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Jorge Onieva, BWH/HMS, Boston<br />
# Caspar Goch, German Cancer Research Center (Mon)<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=933852016 Summer Project Week2016-06-25T07:16:52Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
<br />
<font color="maroon">Please fill in the survey about project weeks today!</font><br />
<br />
<font><br />
[https://hms.az1.qualtrics.com/jfe/form/SV_6gK6BFe4Ivfo9RH click here]<br />
</font><br />
<br />
<br><br><br />
<br />
<font color="maroon">Please hold January 9-13, 2017 for Project Week#24 at MIT. </font><br />
<br />
<br><br><br />
<br />
<font color="red"">Please hold June 16-24 for Project Week#25 in Europe. It will be either right before IPCAI (i.e June ~16-20) or right after CARS! (~June 25-29)</font><br />
<br />
<br><br><br />
<br />
<br><br><br />
<br />
<font color="red"> Please add photos from this week here: https://goo.gl/photos/Dhx6Fdei27NZe2rX9<br />
<br />
<br><br><br />
<br />
</font><br />
<br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> [https://goo.gl/maps/e3ZbcsM5KC82 DKFZ]<br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS, Room Trübnersaal <br />
|-<br />
|bgcolor="#ffffdd"|'''9:00am-10:00am'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[{{FULLPAGENAME}}/Workshop_on_Shared_Software_Platform_for_Ultrasound-Guided_Medical_Interventions|Workshop: Ultrasound-guided interventions software platform (all day)]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| 10:30am-12pm: Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD) <br />
|bgcolor="#ffffff"| [[{{FULLPAGENAME}}/Breakout Session Slicer Extensions|Breakout Session: Slicer Extensions]] (JC, Steve)<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Projects'''=<br />
<br />
<br />
<br />
* Note: Please use this [[2016_Summer_Project_Week_Template | template]] to create project pages<br />
<br />
=== Worldwide Ultrasound Navigation ===<br />
Over the last several PWs, an international group has emerged for collaborative specification and development of ultrasound-based navigation for surgical and interventional radiology applications. This group represents the leadership of ultrasound navigation technology from Queens University (PLUS library: Andras Lasso, Tamas Ungi, Csaba Pinter, Gabor Fichtinter), Montreal Neurologic Institute (Simon Drouin), Brigham and Women's Hospital/HMS (William Wells, Steve Pieper, Sarah Frisken), Robarts University (Adam Rankin), Trondheim University and SINTEF (CustusX: Christian Askeland, Frank Lindseth).<br />
<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
<br />
=== Simplified Human-Computer Interactions for Intra-Operative Usage===<br />
This theme focuses on infrastructure for simplified human-computer interactions for intra-operative usage. This includes Guidelets, simplified graphical user interfaces that can access the same backend as 3D Slicer; as well as interfaces for virtual reality/augmented reality devices from the consumer market that are that are improving by leaps and bounds and show promise for surgical use.<br />
<br />
* [[2016 Summer Project Week/Guidelets | Guidelets (Slicelets for IGT)]] (Tamas Ungi, Andras Lasso, Thomas Vaughan)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper, Anna Roethe)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin, Andras Lasso)<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (David García, Javier Pascau)<br />
* [[2016 Summer Project Week/Auditory Display | Auditory Display Integration]] (David Black, Sarah Frisken, Christian Hansen, Longquan Chen)<br />
<br />
===Machine Learning for IGT===<br />
This theme applies concepts from machine learning to image-guided therapy, including the application of convolutional neural networks for segmentation of mechanically implanted devices during surgery, and the use of Gaussian processes for estimation of uncertainty in image-fusion.<br />
<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Tina Kapur)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, Christian Hansen, William Wells)<br />
<br />
===IGT Other===<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Yannick Suter, Lauren J. O'Donnell)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Rocío López, Javier Pascau, Tamas Ungi)<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI to aid Deep Brain Stimulation]] (Fernando Pérez García)<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Intraoperative Imaging workflow in Hybrid ORs | Intraoperative Imaging in Hybrid ORs]] (Prashin Unadkat, Sarah Frisken, Anna Roethe, Christian Hansen)<br />
<br />
=== Informatics ===<br />
This theme deals with creating data formats to enable medical image informatics. Led by the [http://qiicr.org/about.html QIICR project], the results will be made available in the DICOM for Quantitative Imaging (DCMQI) Library for sharing quantitative image-processing results in a standardized way. <br />
<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter, Andras Lasso, Marco Nolden, Christian Herz)<br />
<br />
=== Infrastructure ===<br />
Improvements to the core functionality of widely used open source tools is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Lauren O'Donnell, Isaiah Norton, Michael Onken)<br />
* [[2016 Summer Project Week/Curve and Surface Creation from Fiducials|Curve and Surface Creation from Fiducials]] (Thomas Vaughan, Junichi Tokuda)<br />
* [[2016 Summer Project WEB and 3D DICOM viewer to the rest of us]] (Koji Kobayashi, Steve Pieper)<br />
<br />
=== Tutorial===<br />
Creation of tutorials and documentation is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/SlicerDMRIDocumentation | Tutorials and Documentations in SlicerDMRI]] (Lauren J. O'Donnell, Fan Zhang, Isaiah Norton)<br />
* [[2016 Summer Project Week/UniversityCourse | Create the basics of a university course about medical image computing]] (Attila Nagy)<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
==Location==<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Getting to Heidelberg:''' Most will fly into Frankfurt Main International (FRA). At the airport look for "long distance trains". There you can buy a ticket from the machine to Heidelberg Hauptbahnhof (main station), around EUR 25. It usually takes less than an hour, with a change in Mannheim to a regional train. https://www.bahn.de . If you arrive on Sunday you can take a bus from the station to the Old Town or where your hotel is. Heidelberg is pretty small, look for directions on Google Maps. If you arrive on Monday see below on how to get to DKFZ directly.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
*** Enter through the main lobby ( just north of https://goo.gl/maps/e3ZbcsM5KC82, you can't miss it, it's the tallest building on campus with a big "dkfz." on top). The meeting room is on the 8th floor (H824, "Glaskasten", "glass box"). We will leave some instructions how to get there at the reception. The meeting time in the lobby will be 8:45am for those who wish to be at the meeting room by 9am. Official activities will start at noon with lunch.<br />
*** To get to DKFZ in the morning you can use the Google Maps link above, public transport information is available there. For people staying in the Old Town, near Bismarckplatz or coming from the station it will be most likely Bus #32, exit at stop "Chirurgische Klinik", which is the second one after crossing the Neckar river. More detailed timetables at [http://fahrplanauskunft.vrn.de/vrn/XSLT_TRIP_REQUEST2?language=en the local transportation services VRN]. If you are up early there is also a nice [https://goo.gl/maps/SRRG6x7KDNU2 walk along the river].<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
***Suggested place for meetings is the Marstall student center ([https://www.google.de/maps/place/Zeughaus-Mensa+im+Marstall/@49.4124525,8.7056926,349m/data=!3m1!1e3!4m5!3m4!1s0x0000000000000000:0x8fd41be2e27fc36e!8m2!3d49.412919!4d8.7044381 map])<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
==Preparatory Conference Calls: ==<br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
=='''Equipment'''==<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]] '''Updated June 16 2016'''<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA and University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS (Mon)<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Marco Nolden, [http://mbi.dkfz-heidelberg.de Medical and Biological Informatics, German Cancer Research Center] (Mon)<br />
# Christian Hansen, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Julian Hettig, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Jorge Onieva, BWH/HMS, Boston<br />
# Caspar Goch, German Cancer Research Center (Mon)<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=933832016 Summer Project Week2016-06-25T07:08:04Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
<br />
<font color="red" size="20">Please fill in the survey about project weeks today!</font><br />
<br />
<font size="28"><br />
[https://hms.az1.qualtrics.com/jfe/form/SV_6gK6BFe4Ivfo9RH click here]<br />
</font><br />
<br />
<br><br><br />
<br />
<font color="red" size="10">Please hold January 9-13, 2017 for Project Week#24 at MIT. </font><br />
<br />
<br><br><br />
<br />
<font color="red" size="10">Please hold June 16-24 for Project Week#25 in Europe. It will be either right before IPCAI (i.e June ~16-20) or right after CARS! (~June 25-29)</font><br />
<br />
<br><br><br />
<br />
<br><br><br />
<br />
<font color="red" size="10"> Please add photos from this week here: https://goo.gl/photos/Dhx6Fdei27NZe2rX9<br />
<br />
<br><br><br />
<br />
</font><br />
<br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> [https://goo.gl/maps/e3ZbcsM5KC82 DKFZ]<br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS, Room Trübnersaal <br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS, Room Trübnersaal <br />
|-<br />
|bgcolor="#ffffdd"|'''9:00am-10:00am'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[{{FULLPAGENAME}}/Workshop_on_Shared_Software_Platform_for_Ultrasound-Guided_Medical_Interventions|Workshop: Ultrasound-guided interventions software platform (all day)]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| 10:30am-12pm: Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD) <br />
|bgcolor="#ffffff"| [[{{FULLPAGENAME}}/Breakout Session Slicer Extensions|Breakout Session: Slicer Extensions]] (JC, Steve)<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Projects'''=<br />
<br />
<br />
<br />
* Note: Please use this [[2016_Summer_Project_Week_Template | template]] to create project pages<br />
<br />
=== Worldwide Ultrasound Navigation ===<br />
Over the last several PWs, an international group has emerged for collaborative specification and development of ultrasound-based navigation for surgical and interventional radiology applications. This group represents the leadership of ultrasound navigation technology from Queens University (PLUS library: Andras Lasso, Tamas Ungi, Csaba Pinter, Gabor Fichtinter), Montreal Neurologic Institute (Simon Drouin), Brigham and Women's Hospital/HMS (William Wells, Steve Pieper, Sarah Frisken), Robarts University (Adam Rankin), Trondheim University and SINTEF (CustusX: Christian Askeland, Frank Lindseth).<br />
<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
<br />
=== Simplified Human-Computer Interactions for Intra-Operative Usage===<br />
This theme focuses on infrastructure for simplified human-computer interactions for intra-operative usage. This includes Guidelets, simplified graphical user interfaces that can access the same backend as 3D Slicer; as well as interfaces for virtual reality/augmented reality devices from the consumer market that are that are improving by leaps and bounds and show promise for surgical use.<br />
<br />
* [[2016 Summer Project Week/Guidelets | Guidelets (Slicelets for IGT)]] (Tamas Ungi, Andras Lasso, Thomas Vaughan)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper, Anna Roethe)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin, Andras Lasso)<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (David García, Javier Pascau)<br />
* [[2016 Summer Project Week/Auditory Display | Auditory Display Integration]] (David Black, Sarah Frisken, Christian Hansen, Longquan Chen)<br />
<br />
===Machine Learning for IGT===<br />
This theme applies concepts from machine learning to image-guided therapy, including the application of convolutional neural networks for segmentation of mechanically implanted devices during surgery, and the use of Gaussian processes for estimation of uncertainty in image-fusion.<br />
<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Tina Kapur)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, Christian Hansen, William Wells)<br />
<br />
===IGT Other===<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Yannick Suter, Lauren J. O'Donnell)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Rocío López, Javier Pascau, Tamas Ungi)<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI to aid Deep Brain Stimulation]] (Fernando Pérez García)<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Intraoperative Imaging workflow in Hybrid ORs | Intraoperative Imaging in Hybrid ORs]] (Prashin Unadkat, Sarah Frisken, Anna Roethe, Christian Hansen)<br />
<br />
=== Informatics ===<br />
This theme deals with creating data formats to enable medical image informatics. Led by the [http://qiicr.org/about.html QIICR project], the results will be made available in the DICOM for Quantitative Imaging (DCMQI) Library for sharing quantitative image-processing results in a standardized way. <br />
<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter, Andras Lasso, Marco Nolden, Christian Herz)<br />
<br />
=== Infrastructure ===<br />
Improvements to the core functionality of widely used open source tools is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Lauren O'Donnell, Isaiah Norton, Michael Onken)<br />
* [[2016 Summer Project Week/Curve and Surface Creation from Fiducials|Curve and Surface Creation from Fiducials]] (Thomas Vaughan, Junichi Tokuda)<br />
* [[2016 Summer Project WEB and 3D DICOM viewer to the rest of us]] (Koji Kobayashi, Steve Pieper)<br />
<br />
=== Tutorial===<br />
Creation of tutorials and documentation is an on-going theme.<br />
<br />
* [[2016 Summer Project Week/SlicerDMRIDocumentation | Tutorials and Documentations in SlicerDMRI]] (Lauren J. O'Donnell, Fan Zhang, Isaiah Norton)<br />
* [[2016 Summer Project Week/UniversityCourse | Create the basics of a university course about medical image computing]] (Attila Nagy)<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
==Location==<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Getting to Heidelberg:''' Most will fly into Frankfurt Main International (FRA). At the airport look for "long distance trains". There you can buy a ticket from the machine to Heidelberg Hauptbahnhof (main station), around EUR 25. It usually takes less than an hour, with a change in Mannheim to a regional train. https://www.bahn.de . If you arrive on Sunday you can take a bus from the station to the Old Town or where your hotel is. Heidelberg is pretty small, look for directions on Google Maps. If you arrive on Monday see below on how to get to DKFZ directly.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
*** Enter through the main lobby ( just north of https://goo.gl/maps/e3ZbcsM5KC82, you can't miss it, it's the tallest building on campus with a big "dkfz." on top). The meeting room is on the 8th floor (H824, "Glaskasten", "glass box"). We will leave some instructions how to get there at the reception. The meeting time in the lobby will be 8:45am for those who wish to be at the meeting room by 9am. Official activities will start at noon with lunch.<br />
*** To get to DKFZ in the morning you can use the Google Maps link above, public transport information is available there. For people staying in the Old Town, near Bismarckplatz or coming from the station it will be most likely Bus #32, exit at stop "Chirurgische Klinik", which is the second one after crossing the Neckar river. More detailed timetables at [http://fahrplanauskunft.vrn.de/vrn/XSLT_TRIP_REQUEST2?language=en the local transportation services VRN]. If you are up early there is also a nice [https://goo.gl/maps/SRRG6x7KDNU2 walk along the river].<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
***Suggested place for meetings is the Marstall student center ([https://www.google.de/maps/place/Zeughaus-Mensa+im+Marstall/@49.4124525,8.7056926,349m/data=!3m1!1e3!4m5!3m4!1s0x0000000000000000:0x8fd41be2e27fc36e!8m2!3d49.412919!4d8.7044381 map])<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
==Preparatory Conference Calls: ==<br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
=='''Equipment'''==<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]] '''Updated June 16 2016'''<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA and University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS (Mon)<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Marco Nolden, [http://mbi.dkfz-heidelberg.de Medical and Biological Informatics, German Cancer Research Center] (Mon)<br />
# Christian Hansen, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Julian Hettig, [http://isgwww.cs.uni-magdeburg.de/cas/ University of Magdeburg], Germany (Mon)<br />
# Jorge Onieva, BWH/HMS, Boston<br />
# Caspar Goch, German Cancer Research Center (Mon)<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=928552016 Summer Project Week2016-06-12T13:38:01Z<p>Kikinis: /* Registrants */</p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
*Preparatory Conference Calls: <br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> DKFZ <br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS<br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS<br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS<br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS<br />
|-<br />
|bgcolor="#ffffdd"|'''8:30am-10:00am'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD)<br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[Breakout Session/Shared Software Platform for Ultrasound-Guided Medical Interventions]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"| TBD <br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| [[Breakout Session/Slicer Extensions]]<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Background'''=<br />
Founded in 2005, the National Alliance for Medical Image Computing (NAMIC), was chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], built using [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an event called Project Week.<br />
<br />
[[Engineering:Programming_Events|Project Week]] is a semi-annual event which draws researchers from around the world. As of August 2014, it is a MICCAI endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event. <br />
<br />
Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.<br />
<br />
Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO], and [https://www.ncigt.org/IGTWiki/index.php/Projects/IGTWeb:R25 NCI Funded Image-Guided Fellowship Program].<br />
<br />
A summary of all previous Project Events is available [[Project_Events#Past|here]].<br />
<br />
This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.<br />
<br />
The 23rd Project Week is being held in conjunction with the [http://www.ipcai.org/ IPCAI 2016] conference that is hosted by the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS).<br />
<br />
Please make sure that you are on the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].<br />
<br />
<br />
='''Equipment'''=<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]]<br />
<br />
='''Projects'''=<br />
* Use this [[2016_Summer_Project_Week_Template | template]] for project pages<br />
<br />
=== IGT ===<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Andre Mastmeyer, Tina Kapur, Paolo Zaffino)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Javier Pascau, Rocío López, Tamas Ungi)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Lauren J. O'Donnell, Yannick Suter)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, William Wells)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper)<br />
<br />
=== Infrastructure ===<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Michael Onken)<br />
<br />
=== Augmented Reality ===<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (Javier Pascau, David García)<br />
<br />
=== Cloud ===<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
<br />
=== Atlas construction ===<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI]] (Fernando Pérez García)<br />
<br />
=== Informatics ===<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter)<br />
<br />
=== Tutorial===<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA and University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
#Gabor Fichtinger, Queen's University, Canada<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=2016_Summer_Project_Week&diff=928542016 Summer Project Week2016-06-12T13:36:54Z<p>Kikinis: /* Registrants */</p>
<hr />
<div>__NOTOC__<br />
<br />
[[image:PW-Summer2016.png|300px]]<br />
<br><br><br />
=Welcome to the web page for the 23rd Project Week!=<br />
The 23rd Project Week open source hackathon is being held in conjunction with the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS) and the [http://www.ipcai.org/ IPCAI 2016] conferences in Heidelberg, Germany. Please go through this page for information, and if you have questions, please contact [https://www.spl.harvard.edu/pages/People/tkapur Tina Kapur, PhD].<br />
<br />
='''Logistics'''=<br />
*'''Dates:''' Monday June 20th to Saturday June 25th, 2016, with one day break on Tuesday June 21st to attend IPCAI.<br />
*'''Location:''' Heidelberg, Germany.<br />
**'''Monday''' at German Cancer Research Center - DKFZ<br />
**'''Tuesday''' there is '''no''' organized Project Week activity due to IPCAI @ CARS<br />
**'''Wednesday-Saturday''' at the Congress Hall of CARS.<br />
*'''REGISTRATION:''' Please register for the CARS conference at http://www.cars-int.org/cars_2016/registration.html<br />
*'''Registration Fee:''' Euro 650 (after April 26, 2016)<br />
*'''Hotel:''' After registration, you can book hotels using the CARS organization at http://germany.nethotels.com/info/heidelberg/events/cars/default_en.htm or on your own. Please remember that Project Week starts on Monday June 20th, even though the formal CARS/IPCAI program starts a day later, so you will need to pay attention while booking the hotel room.<br />
*Preparatory Conference Calls: <br />
**800-501-8979. The pin is 7327389. ([http://www.windstreambusiness.com/resources/user-guides/international-conferencing International dialing instructions are available here])<br />
**Call #1 Tuesday, May 10, 3pm Boston time.<br />
**Call #2 Tuesday, May 17, 3pm Boston time.<br />
**Call #3 Tuesday, May 31, 9am Boston time.<br />
**Call #4 Tuesday, Jun 7, 9am Boston time.<br />
**Call #5 Tuesday, Jun 14, 9am Boston time.<br />
<br />
='''Agenda'''=<br />
<font color="maroon">Please note that on '''Tuesday''' there is no organized Project Week activity due to IPCAI @ CARS</font><br />
{|border="1"<br />
|-style="background:#b0d5e6;color:#02186f"<br />
!style="width:7%" |Time<br />
!style="width:15%" |Monday, June 20 <br> DKFZ <br />
!style="width:3%" |Tuesday, June 21 <br> IPCAI<br />
!style="width:15%" |Wednesday, June 22 <br> Congress Hall of CARS<br />
!style="width:15%" |Thursday, June 23 <br> Congress Hall of CARS<br />
!style="width:15%" |Friday, June 24 <br> Congress Hall of CARS<br />
!style="width:15%" |Saturday, June 25 <br> Congress Hall of CARS<br />
|-<br />
|bgcolor="#ffffdd"|'''8:30am-10:00am'''<br />
|bgcolor="#ffffff"| What does a Neurosurgeon need from technologists? (Alexandra Golby, MD)<br />
|bgcolor="#ffffff"; rowspan="8"|<br />
|bgcolor="#ffffff"|[[Breakout Session/Shared Software Platform for Ultrasound-Guided Medical Interventions]]<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''10:00am-10:30am'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''10:30-12pm'''<br />
|bgcolor="#ffffff"| TBD <br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| Progress Review<br />
|-<br />
|bgcolor="#ffffdd"|'''12:00pm-1:00pm'''<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch<br />
|bgcolor="#ffffaa"|Lunch and adjourn<br />
|-<br />
|bgcolor="#ffffdd"|'''1:00pm-3:00pm'''<br />
|bgcolor="#ffffff"| Welcome! <br> Project Introductions<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"; rowspan="4"|<br />
|-<br />
|bgcolor="#ffffdd"|'''3:00pm-3:30pm'''<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|bgcolor="#f0e68b"| Coffee Break<br />
|-<br />
|bgcolor="#ffffdd"|'''3:30pm-5:00pm'''<br />
|bgcolor="#ffffff"| [[Breakout Session/Slicer Extensions]]<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"|<br />
|bgcolor="#ffffff"| <br />
|-<br />
|bgcolor="#ffffdd"|'''6:00pm'''<br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|bgcolor="#ffffff"| <br />
|-<br />
|}<br />
<br />
='''Background'''=<br />
Founded in 2005, the National Alliance for Medical Image Computing (NAMIC), was chartered with building a computational infrastructure to support biomedical research as part of the NIH funded [http://www.ncbcs.org/ NCBC] program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform [http://www.slicer.org 3D Slicer], built using [http://www.vtk.org VTK], [http://www.itk.org ITK], [http://www.cmake.org CMake], and [http://www.cdash.org CDash], and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an event called Project Week.<br />
<br />
[[Engineering:Programming_Events|Project Week]] is a semi-annual event which draws researchers from around the world. As of August 2014, it is a MICCAI endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event. <br />
<br />
Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.<br />
<br />
Several funded projects use the Project Week as a place to convene and collaborate. These include [http://nac.spl.harvard.edu/ NAC], [http://www.ncigt.org/ NCIGT], [http://qiicr.org/ QIICR], [http://ocairo.technainstitute.com/open-source-software-platforms-and-databases-for-the-adaptive-process/ OCAIRO], and [https://www.ncigt.org/IGTWiki/index.php/Projects/IGTWeb:R25 NCI Funded Image-Guided Fellowship Program].<br />
<br />
A summary of all previous Project Events is available [[Project_Events#Past|here]].<br />
<br />
This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.<br />
<br />
The 23rd Project Week is being held in conjunction with the [http://www.ipcai.org/ IPCAI 2016] conference that is hosted by the [http://www.cars-int.org/ 30th International Conference on Computer Assisted Radiology and Surgery] (CARS).<br />
<br />
Please make sure that you are on the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].<br />
<br />
<br />
='''Equipment'''=<br />
*[[2016_Summer_Project_Week:Equipment|Specialized equipment people are going to bring]] (Please add to this list if you are bringing anything)<br />
*[[2016_Summer_Project_Week:Equipment_Requests|Specialized equipment that people would like to have]]<br />
<br />
='''Projects'''=<br />
* Use this [[2016_Summer_Project_Week_Template | template]] for project pages<br />
<br />
=== IGT ===<br />
* [[2016 Summer Project Week/Integrating/Using OpenIGTLink for the communications of Robotics devices | Integrating/Using OpenIGTLink for the Communications of Robotics Devices]] (Scheherazade Kraß, Longquan Chen)<br />
* [[2016 Summer Project Week/Needle Segmentation from MRI | Needle Segmentation from MRI]] (Guillaume Pernelle, Andre Mastmeyer, Tina Kapur, Paolo Zaffino)<br />
* [[2016 Summer Project Week/Guided Ultrasound Calibration | Guided Ultrasound Calibration]] (Elvis Chen, Inês Prata, Tamas Ungi)<br />
* [[2016 Summer Project Week/Tracked Ultrasound Standardization | Tracked Ultrasound Standardization II: The Implementering]] (Andras Lasso, Christian Askeland, Simon Drouin, Junichi Tokuda, Longquan Chen, Adam Rankin, Thomas Kirchner, Janne Beate Bakeng)<br />
* [[2016 Summer Project Week/Integrating PLUS in applications using OpenIGTLink | Integrating PLUS in Applications using OpenIGTLink]] (Christian Askeland, Janne Beate Bakeng, Ole Vegard Solberg, Jon Eiesland, Longquan Chen, Simon Drouin)<br />
* [[2016 Summer Project Week/SliceTracker | SliceTracker for Data Collection and Prostate Biopsy Support ]] (Christian Herz, Peter Behringer, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Sacral Neuromodulation | Sacral Neuromodulation ]] (Javier Pascau, Rocío López, Tamas Ungi)<br />
* [[2016 Summer Project Week/Intra-procedural prostate motion characterization | Prostate Motion Characterization ]] (Peter Behringer, Christian Herz, Andrey Fedorov)<br />
* [[2016 Summer Project Week/Structural-functional measurements | Structural - Functional Relationship Measurements of Tractography Data with fMRI ]] (Lauren J. O'Donnell, Yannick Suter)<br />
* [[2016 Summer Project Week/Uncertainty-aware Information Fusion | Uncertainty-aware Information Fusion for Real-time Soft Tissue Motion Estimation]] (Bojan Kocev, Sarah Frisken, William Wells)<br />
* [[2016 Summer Project Week/Slicelet For Ultrasound Acquisition | Slicelet for Ultrasound Acquisition]] (Sarah Frisken, Prashin Unadkat, Steve Pieper)<br />
<br />
=== Infrastructure ===<br />
* [[2016 Summer Project Week/3D Lasso Selection | Implementation and Testing Performance of 3-D Lasso Selection within the Segmentation Editor Infrastructure ]] (Davide Punzo, Csaba Pinter, Andras Lasso, Steve Pieper)<br />
* [[2016 Summer Project Week/Segmentations Integration | Integration of Segmentations Infrastructure and Related Modules to Slicer Core]] (Csaba Pinter, Andras Lasso)<br />
* [[2016 Summer Project Week/DICOM Tractography Results | Finalizing DICOM Tractography Results Implementation in DCMTK for BWH Project]] (Michael Onken)<br />
<br />
=== Augmented Reality ===<br />
* [[2016 Summer Project Week/VRPN Integration | VRPN Integration]] (Dženan Zukić)<br />
* [[2016 Summer Project Week/OpenVR_integration | OpenVR Integration]] (Adam Rankin)<br />
* [[2016 Summer Project Week/AR with a tablet device in the surgical room | AR with a Tablet Device in the Surgical Room]] (Javier Pascau, David García)<br />
<br />
=== Cloud ===<br />
* [[2016 Summer Project Week/medical imaging webapp | Medical Imaging WebApp Software]] (Steve Pieper, Marco Nolden, Hans Meine)<br />
<br />
=== Atlas construction ===<br />
* [[2016 Summer Project Week/Histological Brain Atlas | Tool for the construction of an integrated brain atlas based on histology and MRI]] (Fernando Pérez García)<br />
<br />
=== Informatics ===<br />
* [[2016 Summer Project Week/DICOM Parametric Maps | Finalizing DICOM Parametric Map Implementation in DCMTK for QIICR project]] (Michael Onken, Jan Schlamelcher, Andrey Fedorov, Christian Herz)<br />
* [[2016 Summer Project Week/dcmqi | DICOM for Quantitative Imaging (dcmqi) Library]] (Andrey Fedorov, Christian Herz, Marco Nolden, Hans Meine, Csaba Pinter, Steve Pieper, et al)<br />
* [[2016 Summer Project Week/MeVisLab SEG Colors | Support Reading and Writing DICOM Tags for SEG Colors]] (Hans Meine)<br />
* [[2016 Summer Project Week/Segmentation Editor and Terminology | Segmentation Editor and Terminology]] (Nicole Aucoin, Andrey Fedorov, Csaba Pinter)<br />
<br />
=== Tutorial===<br />
* [[2016 Summer Project Week/CameraTutorial | How to use Basler Cameras for Medical Applications]] (Peter Behringer, Santhirarajah Mathimugan, Steve Pieper)<br />
<br />
= '''Registrants''' =<br />
<br />
'''REGISTRATION:''' Please add your name to this list if you are definitely planning to attend. If you are not already on it, please add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list]. We need to know the number of people at DKFZ, so if you are there on Monday, please add "(Mon)" next to your name. Official registration for the event is through the CARS conference at http://www.cars-int.org/cars_2016/registration.html -- which you can do now or onsite.<br />
<br />
# Tina Kapur, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Ron Kikinis, Brigham and Women's Hospital, Harvard Medical School (BWH/HMS), Boston, USA (Mon)<br />
# Dženan Zukić, Kitware, USA<br />
# Ines Prata Machado, MIT Portugal Program (PhD Student), Lisbon, Portugal. (Mon)<br />
# Sonia Pujol, Brigham and Women's Hospital, Harvard Medical School (Mon)<br />
# Scheherazade Kraß, PhD Student, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Maria Francesca Spadea [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Paolo Zaffino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Salvatore Scaramuzzino [http://www.imagenglab.com ImagEngLab], Italy (Mon)<br />
# Steve Pieper, Isomics, Inc., USA (Mon)<br />
# Nicole Aucoin, Brigham and Women's Hospital (Mon)<br />
# Simon Drouin, Montreal Neurological Institute (Mon)<br />
# Thomas Kirchner, German Cancer Research Center (Mon)<br />
# Elvis Chen, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Adam Rankin, [http://www.imaging.robarts.ca/petergrp/Research Robarts Research Institute], Canada (Mon)<br />
# Christian Askeland, SINTEF, Norway (Mon)<br />
# Hans Meine, University of Bremen / Fraunhofer MEVIS, Germany<br />
# Longquan Chen, BWH/HMS, Boston, USA (Mon)<br />
# Davide Punzo, Kapteyn Astronomical Institute, Netherlands (Mon)<br />
# Lauren O'Donnell, BWH/HMS<br />
# Yannick Suter, BWH/HMS (Mon)<br />
# Junichi Tokuda, BWH/HMS (Mon)<br />
# Sarah Frisken, BWH/HMS (Mon)<br />
# Prashin Unadkat, BWH/HMS<br />
# Anna Roethe, Charite, Berlin<br />
# Michael Onken, Open Connections, Germany (Mon)<br />
#Jan Schlamelcher, Open Connections/OFFIS, Germany<br />
# Janne Beate Bakeng, SINTEF, Norway<br />
# Ole Vegard Solberg, SINTEF, Norway<br />
# Jon Eiesland, SINTEF, Norway<br />
# Tamas Ungi, Queen's University, Canada (Mon)<br />
# Andras Lasso, Queen's University, Canada (Mon)<br />
# Csaba Pinter, Queen's University, Canada (Mon)<br />
# Thomas Vaughan, Queen's University, Canada (Mon)<br />
#Gabor Fichtinger, Queen's University, Canada<br />
# Javier Pascau, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Verónica García-Vazquez, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Mónica García-Sevilla, Universidad Carlos III de Madrid, Spain (Mon)<br />
# David García-Mato, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Rocío López-Velazco, Universidad Carlos III de Madrid, Spain (Mon)<br />
# Raúl San José, BWH/HMS, Boston<br />
# Pietro Nardeli, BWH/HMS, Boston<br />
# Andrey Fedorov, BWH/HMS, Boston (Mon, Wed, Thu)<br />
# Christian Herz, BWH/HMS, Boston (Mon)<br />
# Frank Lindseth, NTNU/SINTEF, Norway<br />
# Peter Behringer, Basler AG, Germany<br />
# Santhirarajah Mathimugan, Basler AG, Germany<br />
# Koji Kobayashi, Vocsis Corporation, Japan<br />
# David Black, University of Bremen / Fraunhofer MEVIS, Germany (Mon)<br />
#William Wells, BWH/HMS (Mon)<br />
# Attila Nagy, University of Szeged, Hungary (Mon)<br />
# Bojan Kocev, [http://www.uni-bremen.de/ University of Bremen], [http://www.mic.uni-bremen.de/ Medical Image Computing]group, Germany (Mon)<br />
# Sara Fernández Vidal, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
# Fernando Pérez García, [http://icm-institute.org/en/ Institute of the Brain and Spine], France (Mon)<br />
<br />
<br />
'''Please don't forget to add yourself to the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list].'''</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92342SPL252016-04-04T13:39:06Z<p>Kikinis: /* Submission */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 08:30-09:00 Breakfast<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Workshop: Posters, demos (and snacks)<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO],<br> the embodiment of [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's]<br> vision for image-guided therapy,<br> will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Poster Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92341SPL252016-04-04T13:38:37Z<p>Kikinis: /* SPL 25 Celebration and Workshop */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 08:30-09:00 Breakfast<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Workshop: Posters, demos (and snacks)<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO],<br> the embodiment of [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's]<br> vision for image-guided therapy,<br> will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92324SPL252016-03-25T03:03:34Z<p>Kikinis: /* SPL 25 Celebration and Workshop */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO],<br> the embodiment of [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's]<br> vision for image-guided therapy,<br> will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92323SPL252016-03-25T03:03:13Z<p>Kikinis: /* SPL 25 Celebration and Workshop */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|250px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO],<br> the embodiment of [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's]<br> vision for image-guided therapy,<br> will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92322SPL252016-03-25T03:01:34Z<p>Kikinis: /* SPL 25 Celebration and Workshop */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|250px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92321SPL252016-03-25T03:00:39Z<p>Kikinis: /* SPL 25 Celebration and Workshop */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|250px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92320SPL252016-03-25T02:57:19Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
==Registration==<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92319SPL252016-03-25T02:56:39Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
'''Friday, April 8, 5pm -7.30pm:''' Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
'''Saturday, April 9, 9am-12noon:''' Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [[media:PeterBlackSPL25.pdf | Peter Black]]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92281SPL252016-03-23T10:48:04Z<p>Kikinis: /* Poster session on Saturday */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Scientific Session=<br />
The Scientific Session on Saturday (10.15-11.30am) is an opportunity to share participant's research with the SPL community. <br />
*Format: Peer reviewed electronic posters.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92280SPL252016-03-23T10:33:57Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
=SPL 25 Celebration and Workshop=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
=Poster session on Saturday=<br />
The Saturday morning poster session (10.15-11.30am) is a scientific event and will provide an opportunity to share participant's research with the SPL community. <br />
*Posters will be peer reviewed.<br />
*Presentations will be electronic.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92279SPL252016-03-23T10:24:05Z<p>Kikinis: /* Poster session on Saturday */</p>
<hr />
<div>__NOTOC__<br />
=Program=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Poster session on Saturday=<br />
The Saturday morning poster session (10.15-11.30am) is a scientific event and will provide an opportunity to share participant's research with the SPL community. <br />
*Posters will be peer reviewed.<br />
*Presentations will be electronic.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92278SPL252016-03-23T10:23:15Z<p>Kikinis: /* Posters */</p>
<hr />
<div>__NOTOC__<br />
=Program=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Poster session on Saturday=<br />
The Saturday morning poster session is a scientific event and will provide an opportunity to share participant's research with the SPL community. <br />
*Posters will be peer reviewed.<br />
*Presentations will be electronic.<br />
==Logistics==<br />
===Submission===<br />
*Please submit an abstract to the review using this link: '''https://easychair.org/conferences/?conf=spl25'''<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation during the session===<br />
*There will be space in available with tables to set up laptops/tablet computers<br />
*Please bring a laptop with a pre-loaded presentation of the reviewed content (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92277SPL252016-03-23T10:15:45Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
=Program=<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Posters=<br />
The Saturday morning session will provide an opportunity to share your research with the SPL community. <br />
*Poster abstracts will be peer reviewed.<br />
*The poster presentations will be electronic.<br />
==Poster Logistics==<br />
===Poster Submission===<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation of Posters===<br />
*Please bring a laptop with a pre-loaded presentation (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92276SPL252016-03-23T10:15:20Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|300px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Posters=<br />
The Saturday morning session will provide an opportunity to share your research with the SPL community. <br />
*Poster abstracts will be peer reviewed.<br />
*The poster presentations will be electronic.<br />
==Poster Logistics==<br />
===Poster Submission===<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation of Posters===<br />
*Please bring a laptop with a pre-loaded presentation (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92275SPL252016-03-23T10:14:40Z<p>Kikinis: /* Presentation of Posters */</p>
<hr />
<div>__NOTOC__<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Posters=<br />
The Saturday morning session will provide an opportunity to share your research with the SPL community. <br />
*Poster abstracts will be peer reviewed.<br />
*The poster presentations will be electronic.<br />
==Poster Logistics==<br />
===Poster Submission===<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation of Posters===<br />
*Please bring a laptop with a pre-loaded presentation (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
==About==<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92274SPL252016-03-23T10:13:33Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
=Posters=<br />
The Saturday morning session will provide an opportunity to share your research with the SPL community. <br />
*Poster abstracts will be peer reviewed.<br />
*The poster presentations will be electronic.<br />
==Poster Logistics==<br />
===Poster Submission===<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.<br />
===Presentation of Posters===<br />
*Please bring a laptop with a pre-loaded presentation (in any format of your choice) that can be cycled through in 8 minutes. Movies and images are encouraged.<br />
<br />
<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92236SPL252016-03-12T19:47:04Z<p>Kikinis: /* Abstract Guidelines */</p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Abstract Guidelines==<br />
The Saturday morning session will provide an opportunity to share your research with the SPL community. Abstracts will be peer reviewed.<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92235SPL252016-03-12T19:45:23Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8, 5pm -7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9, 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Abstract Guidelines==<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92234SPL252016-03-12T19:44:27Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8 5-7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9: 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of <br> [https://en.wikipedia.org/wiki/Ferenc_A._Jolesz Ferenc Jolesz's] vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Abstract Guidelines==<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92231SPL252016-03-11T13:17:05Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8 5-7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9: 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of our dear mentor <br> Ferenc Jolesz's vision for image-guided therapy, <br>will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Abstract Guidelines==<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92230SPL252016-03-11T13:16:38Z<p>Kikinis: /* Program */</p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Program==<br />
{| border="00" cellpadding="5" cellspacing="0" width="90%"<br />
|-<br />
| rowspan="2"| <br />
<br />
Friday, April 8 5-7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9: 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
| style="background: #ebeced" colspan="2" align="center"| [[Image:Circlelogo-25-675x700.png|400px]]<br />
|-<br />
| style="background: #ebeced"| <br />
| style="background: #ebeced"|Tours of [http://ncigt.org/amigo AMIGO], the embodiment of our dear mentor <br> Ferenc Jolesz's vision for image-guided therapy, will be also available upon request.<br />
|}<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Abstract Guidelines==<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.</div>Kikinishttps://www.na-mic.org/w/index.php?title=File:Circlelogo-25-675x700.png&diff=92228File:Circlelogo-25-675x700.png2016-03-11T13:15:11Z<p>Kikinis: </p>
<hr />
<div></div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92226SPL252016-03-11T04:23:23Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Program==<br />
<br />
Friday, April 8 5-7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9: 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
Tours of [http://ncigt.org/amigo AMIGO], the embodiment of our dear mentor Ferenc Jolesz's vision for image-guided therapy, will be also available upon request.<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Abstract Guidelines==<br />
*Please submit your abstracts for review here: https://easychair.org/conferences/?conf=spl25<br />
*1 page (8.5 inch x 11 inch page, US letter size), submitted in acrobat pdf format, with 1 inch margins, maximum 6 lines per inch (single spaced in software such as MS Word), in size 11 Arial Font. <br />
*Abstract submissions should include Title, Author(s), Affiliation(s), and five sections: Purpose, Methods, Results, Conclusions, Funding Source(s), identified by bold headers.<br />
*Images in abstracts are encouraged.<br />
*The program committee will review all submissions and decisions will be communicated on a rolling basis beginning March 31, 2016.<br />
*Please do not submit material that is not ready for public dissemination.<br />
*All abstracts will be made available publicly on the SPL symposium website.</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92129SPL252016-01-14T09:42:04Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
This is the program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Preliminary Program==<br />
<br />
Friday, April 8 5-7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9: 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
Tours of [http://ncigt.org/amigo AMIGO], the embodiment of our dear mentor Ferenc Jolesz's vision for image-guided therapy, will be also available upon request.<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Posters and Demos==<br />
<br />
* Content: Your science, presented to the SPL community<br />
* Format: Introduction, M+M, Results, Discussion, Conclusions<br />
== Invitation ==<br />
This is the draft version of the invitation<br />
{|class="wikitable"<br />
|align="left"|<big>SPL 25th Anniversary Celebration</big><br />
Dear Friends,<br />
<br />
I am delighted to invite you, the alumni/ae and colleagues of the SPL, to participate in the celebration of the twenty-fifth anniversary of the Surgical Planning Laboratory.<br />
<br />
From humble beginnings in corners of unused spaces in the Radiology Department at Brigham and Women's Hospital, the SPL has evolved into a leading institution in medical image computing, both investigating novel technologies and using them for biomedical research. It has been my privilege to both lead and participate in many of these activities.<br />
<br />
The unique strength of the SPL has always been the spirit and exceptional quality of its international community of investigators and partners, all working together to change the face of medicine. Many of you have carried this spirit beyond the SPL to wherever you are today.<br />
<br />
Please join us for a celebratory symposium at Brigham and Women’s Hospital and Harvard Medical School in Boston on April 8 and 9, 2016.<br />
<br />
Best Regards,<br />
<br />
Ron Kikinis<br />
<br />
|[[image:Circlelogo-25-1080x1120.png|250px]]<br />
|}</div>Kikinishttps://www.na-mic.org/w/index.php?title=SPL25&diff=92128SPL252016-01-14T09:41:16Z<p>Kikinis: </p>
<hr />
<div>__NOTOC__<br />
This is the draft program of the SPL 25 anniversary event. For the invitation click [http://www.spl.harvard.edu/25/ here]<br />
<br />
<br />
==Preliminary Program==<br />
<br />
Friday, April 8 5-7.30pm: Reception at [http://www.brighamandwomens.org/About_BWH/locations/main-campus-map.aspx Cabot Auditorium], Brigham and Women's Hospital, 45 Francis Street (aka 45 lobby)<br />
* 05.00-05.30 Arrival<br />
* 05.30-06.00 Welcome: [http://physiciandirectory.brighamandwomens.org/Details/1401 Steven Seltzer], [http://www.brighamandwomens.org/About_BWH/publicaffairs/aboutbwh/LeadershipBios/anderson.aspx Paul Anderson]<br />
* 06.00-07.30 Music by the band [https://www.facebook.com/besteverchicken/photos_stream “Best Ever Chicken”.], finger food and drinks<br />
<br />
Saturday, April 9: 9am-12noon: Symposium at [http://www.theconfcenter.hms.harvard.edu/ Joseph P. Martin Center], Harvard Medical School<br />
* 09.00-09.15 Welcome: [http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis]<br />
* 09.15-10.15 Plenary talks: [https://www.spl.harvard.edu/pages/People/ctempany Clare Tempany], [http://pnl.bwh.harvard.edu/martha-shenton-ph-d/ Martha Shenton], [https://orgchart.mit.edu/chancellor-academic-advancement Eric Grimson], [https://drpetermblack.wordpress.com/about/ Peter Black]<br />
* 10.15-11.30 Snacks and Science: Posters, demos, and snacks<br />
* 11.30-12.00 Closing remarks<br />
<br />
<br />
Tours of [http://ncigt.org/amigo AMIGO], the embodiment of our dear mentor Ferenc Jolesz's vision for image-guided therapy, will be also available upon request.<br />
<br />
==Registration==<br />
<br />
[http://www.eventbrite.com/e/spl-25th-anniversary-celebration-tickets-19546375736 SPL25 Registration (Eventbrite)]<br />
<br />
== Posters and Demos==<br />
<br />
* Content: Your science, presented to the SPL community<br />
* Format: Introduction, M+M, Results, Discussion, Conclusions<br />
== Invitation ==<br />
This is the draft version of the invitation<br />
{|class="wikitable"<br />
|align="left"|<big>SPL 25th Anniversary Celebration</big><br />
Dear Friends,<br />
<br />
I am delighted to invite you, the alumni/ae and colleagues of the SPL, to participate in the celebration of the twenty-fifth anniversary of the Surgical Planning Laboratory.<br />
<br />
From humble beginnings in corners of unused spaces in the Radiology Department at Brigham and Women's Hospital, the SPL has evolved into a leading institution in medical image computing, both investigating novel technologies and using them for biomedical research. It has been my privilege to both lead and participate in many of these activities.<br />
<br />
The unique strength of the SPL has always been the spirit and exceptional quality of its international community of investigators and partners, all working together to change the face of medicine. Many of you have carried this spirit beyond the SPL to wherever you are today.<br />
<br />
Please join us for a celebratory symposium at Brigham and Women’s Hospital and Harvard Medical School in Boston on April 8 and 9, 2016.<br />
<br />
Best Regards,<br />
<br />
Ron Kikinis<br />
<br />
|[[image:Circlelogo-25-1080x1120.png|250px]]<br />
|}</div>Kikinis