NAMIC Wiki - User contributions [en]

2012 Summer Project Week:XTK

2012-06-22T14:55:28Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[Media:Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
*Progress:
** A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).
** Feedback for the tutorial.
** HTML/JAVASCRIPT/CSS Template for exported scene.
** Identify new requirements in XTK (vtk tensors, etc.)
** Fixes in XTK (resize web browser)

* Next:
** Finish the template (design + connections)
** Export the whole slicer scene in new HTML template

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-22T14:44:58Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[Media:Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
*Progress:
** A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).
** Feedback for the tutorial.
** HTML/JAVASCRIPT/CSS Template for exported scene.
** Identify new requirements in XTK (vtk tensors, etc.)
** Fix in XTK (resize web browser)

* Next:
** Finish the template (design + connections)
** Export the whole slicer scene in new HTML template

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-22T14:44:29Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[Media:Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
*Progress:
** A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).
** Feedback for the tutorial.
** HTML/JAVASCRIPT/CSS Template for exported scene.
** Identify new requirements in XTK (vtk tensors, etc.)
** Fix in XTK (resize web browser)

* Next:
** Finish the template (design + connect buttons to models)
** Export the whole slicer scene in new HTML template

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-22T14:43:31Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[Media:Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
*Progress:
** A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).
** Feedback for the tutorial.
** HTML/JAVASCRIPT/CSS Template for exported scene.
** Identify new requirements in XTK (vtk tensors, etc.)
** Fix in XTK (resize web browser)

* Next:
** export the whole slicer scene in new template
** finish template

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-22T14:12:35Z

Nicolas.rannou:

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[Media:Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Got feedback for the tutorial.

Template for exported scene.

Identify new requirements in XTK (vtk tensors, etc.)
Should export the whole slicer scene

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-22T14:12:11Z

Nicolas.rannou:

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[File:Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Got feedback for the tutorial.

Template for exported scene.

Identify new requirements in XTK (vtk tensors, etc.)
Should export the whole slicer scene

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-22T14:11:58Z

Nicolas.rannou:

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week [[Progress_webglexport.mov]]
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Got feedback for the tutorial.

Template for exported scene.

Identify new requirements in XTK (vtk tensors, etc.)
Should export the whole slicer scene

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

File:Progress webglexport.mov

2012-06-22T14:09:25Z

Nicolas.rannou: Progress_webglexport

Progress_webglexport

2012 Summer Project Week:XTK

2012-06-22T14:07:29Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Got feedback for the tutorial.

Template for exported scene.

Identify new requirements in XTK (vtk tensors, etc.)
Should export the whole slicer scene

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-21T21:13:11Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Template for exported scene.

Export whole scene to xtk compliant code.

Identify new requirements in XTK (vtk tensors, etc.)
Should export the whole slicer scene

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

2012 Summer Project Week:XTK

2012-06-21T20:36:54Z

Nicolas.rannou:

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
Image:webgl_export_template.png|Template at the end of the summer project week
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Template for exported scene.

Ultimate solution is a slicer scene reader in XTK.

Export whole scene to xtk compliant code.

Identify new requirements in XTK (vtk tensors, etc.)

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

File:Webgl export template.png

2012-06-21T20:35:32Z

Nicolas.rannou: webgl_export_template.png

webgl_export_template.png

2012 Summer Project Week:XTK

2012-06-21T20:21:46Z

Nicolas.rannou: /* Key Investigators */

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:Xfibers.png|Tractography rendered with XTK in 5 lines of JavaScript code, here the [http://lessons.goxtk.com/06/ live version].
Image:Xvolume.png|MRI volume + label map rendered with XTK, here the [http://lessons.goxtk.com/13/ live version].
Image:Xtkabdom.png|The SPL Abdominal Atlas. ''Left'': In 3D Slicer version 4, ''Right'': In a web browser exported using the '''WebGL Export''' module.
Image:Xtkbrain.png|The NAC Brain Atlas: ''Left'': In Slicer, ''Right'': In a web browser.
Image:Xtkblack.png|An example WebGL export with black background color and a caption tooltip. ''Left'': In Slicer, ''Right'': In a web browser.
</gallery>

==Key Investigators==
* Boston Children's Hospital: Daniel Haehn, Nicolas Rannous, Rudolph Pienaar
* Isomics Inc.: Steve Pieper

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
XTK is a WebGL framework providing an easy-to-use API to visualize scientific data on the web. No background or knowledge in Computer Graphics is required and a [https://github.com/xtk/X/wiki/X:Fileformats variety of file formats] can be natively read and visualized with very little JavaScript code.<br><br>Nevertheless, some researchers want to share their data without writing any code so we propose a '''one-click WebGL export module''' for 3D Slicer 4.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
The '''WebGL Export''' module should enable the export of ''Surface Models'', ''Fiber Tracks'' and ''Volumes in 2D and 3D (including Volume Rendering)'' from 3D Slicer 4 to the web.

First step of further development is to update the currently existing '''WebGL Export''' module to a new XTK version. Additionally, a TrackVis file format (.TRK) writer should be implemented for 3D Slicer 4 since XTK natively supports this format for Tractography.

Also, it should be interesting to investigate if Slicer Data Bundles or Scene Views can be exported.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
A first version of the '''WebGL Export''' module is part of the latest 3D Slicer 4 release. Currently, it supports the export of ''Surface Models'' to a website (see [http://www.na-mic.org/Wiki/index.php/File:WebGLExport_TutorialContestSummer2012.pdf tutorial]).

Template for exported scene.

Ultimate solution is a slicer scene reader in XTK.

Export whole scene to xtk compliant code.

Identify new requirements in XTK (vtk tensors, etc.)

</div>
</div>

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#ITK Module
#Slicer Module
##Built-in '''YES'''
##Extension -- commandline
##Extension -- loadable
#Other (Please specify)

==References==
* [http://goXTK.com The XTK website] including lessons, demos etc.
* [https://github.com/xtk/SlicerWebGLExport Github Project Page] for the 3D Slicer WebGL Export module
* '''WebGL for Baby Brains: Neuroimaging in the Browser''' at the WebGL Camp Orlando 2012, [http://www.youtube.com/watch?v=SQuH-xpdlbc Video]
* '''Science!''' featuring XTK, [http://creativejs.com/2012/04/science/ CreativeJS.com]
* '''The X Toolkit for Scientific Visualization''' on [http://www.webgl.com/2012/03/webgl-demo-the-x-toolkit-for-scientific-visualization/ WebGL.com]
* D. Haehn, N. Rannou, B. Ahtam, E. Grant, R. Pienaar: '''Neuroimaging in the Browser using the X Toolkit''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/neuroimaging-in-the-browser-using-the-x-toolkit Abstract]
* A. Klein, N. Nichols, D. Haehn: '''Mindboggle 2 interface: online visualization of extracted brain features with XTK''', INCF Neuroinformatics 2012, [http://www.neuroinformatics2012.org/abstracts/mindboggle-2-interface-online-visualization-of-extracted-brain-features-with-xtk Abstract]

WebGLExport TutorialContestSummer2012

2012-06-19T16:24:47Z

Nicolas.rannou: /* Testing */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[File:WebGLExport_TutorialContestSummer2012.pdf]]
*Download the data [http://www.spl.harvard.edu/publications/bitstream/download/5276 here]

2012 Tutorial Contest

2012-06-15T17:10:31Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012 WebGL Export ]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

WebGLExport TutorialContestSummer2012

2012-06-15T17:09:37Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[File:WebGLExport_TutorialContestSummer2012.pdf]]
*Download the data [http://www.spl.harvard.edu/publications/bitstream/download/5276 here]

WebGLExport TutorialContestSummer2012

2012-06-15T17:09:15Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[File:WebGLExport_TutorialContestSummer2012.pdf here]]
*Download the data [http://www.spl.harvard.edu/publications/bitstream/download/5276 here]

2012 Tutorial Contest

2012-06-15T17:08:45Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012 WebGLExport ]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:08:23Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012| WebGLExport ]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:07:54Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[[http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012| WebGLExport ]]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:07:36Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[[ http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012 | WebGLExport ]]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:07:17Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[[http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012|WebGL Export]]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:07:01Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[[WebGL Export|http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012]]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:06:49Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[WebGL Export|http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

2012 Tutorial Contest

2012-06-15T17:06:02Z

Nicolas.rannou: /* Submission Dead-line and Presentation */

[[Media:Example.ogg]][http://www.slicer.org Slicer4] is used to perform meaningful research tasks. As part of the NA-MIC Training Core activities we are building a curated portfolio of tutorials for the basic functions and specialized functionality available in Slicer.

The primary purpose of the Summer 2012 tutorial contest is to enrich the training materials that are available to end-users and developers using 3D Slicer and the NA-MIC kit. We believe participants will be motivated to join this event to enhance the dissemination of their own algorithms that they have incorporated into the Slicer4 platform and/or to enhance training of Slicer4 functionality for their own laboratory groups.

There will be three categories:
*Category 1: '''END TO END SOLUTION TUTORIAL''' <br> In this category, the tutorial will teach a user how to solve a particular clinical problem using the NA-MIC Kit. <br> Example: [http://www.slicer.org/slicerWiki/images/f/f1/NeurosurgicalPlanning_SoniaPujol.pdf White Matter Exploration for Neurosurgical Planning]
*Category 2: '''ALGORITHM TUTORIAL:''' In this category the tutorial will teach a user how to make an algorithm work on their data.<br> Examples: [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Quantitative Imaging tutorial]<br>
*Category 3: '''METHODOLOGY TUTORIAL'''. Application-level tutorials for users and developers.<br> Examples:[[Slicer3:Fiducials_TutorialContestSummer2010 | '''Fiducials''']]

Entries in each category require the following material:
* scientific background and application motivation
* step-by-step instructions
* anonymized sampel dataset

=Rules=
*Tutorial must be based on the [http://download.slicer.org/ Slicer4.1 release version ].
*To enter the contest, you must provide '''a version of the tutorial that works on all supported platforms (Mac,Windows,Linux)+'''.
*Tutorial and all of its components (data, powerpoints/pdfs, additional modules etc.) must be released under the [http://www.slicer.org/slicerWiki/index.php/Slicer:license Slicer license]
*Tutorial data must be anonymized
*Tutorial must include contact information of the primary author (e-mail and phone number)
*Tutorial must follow the guidelines specified above and use the [[Media:TutorialContest_Template_2012.ppt‎ | Summer 2012 contest tutorial template]].
*If applicable, the tutorial must provide clear directions for downloading and installing additional modules <br>
+Applicants will work with the NA-MIC Training and Dissemination Cores in advance to do the multi-platform testing.

=Submission Dead-line and Presentation=

'''<span style="background-color: yellow"> Submission dead-line: Monday June 11, 2012'''</span>
* '''Submission process''': to enter the contest, please follow the 5 steps below:
**1. Create a wiki page for your tutorial on the NA-MIC wiki.
**2. Upload your slides and tutorial dataset. Your tutorial and data must be named as 'TutorialName_TutorialContestSummer2012.pdf' and 'TutorialData_TutorialContestSummer2012.zip'
**3. Add a link to the uploaded tutorial and datasets on your tutorial page.
**4. Copy the template of the [http://wiki.na-mic.org/Wiki/index.php/Training:Summer_2012_Contest_Table Summer 2012 test table ] on your tutorial page, and enter the results of your cross-platform testing (Mac, Windows XP &7, Linux 64, Linux 32).
**5. Once you have completed step 1-4, add a link to your tutorial page in the list below and send a notification email to Sonia Pujol (spujol at bwh.harvard.edu) to receive a confirmation of your submission.

* '''Presentation at the NA-MIC Project week''': Brief highlights of tutorials will be presented by the authors at 3 pm on Tuesday June 19 at the Summer 2012 Project Week. Each presentation should be 10-minute summary of the submission.

*Tutorial contest entries
#[http://wiki.na-mic.org/Wiki/index.php/File:CARMA-LA-Scar_TutorialContestSummer2012.pdf Automatic Left Atrial Scar Segmenter. Greg Garner, Josh Cates, SCI, Utah]
#[http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Qualitative and quantitative comparison of two RT dose distributions. James Shackleford, Nadya Shusharina, Greg Sharp, MGH]
#[http://www.na-mic.org/Wiki/index.php/File:DoseAccumulationforAdaptiveRadiationTherapy_TutorialContestSummer2012.pdf Dose accumulation for adaptive radiation therapy. Kevin Wang, Csaba Pinter, Andras Lasso, PMH, Queen's]
#[http://www.na-mic.org/Wiki/index.php/WebGLExport_TutorialContestSummer2012]

Judging will be done immediately following the presentations and winners will be announced Wednesday June 20 at 12:45 PM in the Grier Room.

Contest judges:
* Nicole Aucoin
* Guillaume Pernelle
* Nabgha Farhat
* Sonia Pujol

WebGLExport TutorialContestSummer2012

2012-06-15T17:04:56Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[File:WebGLExport_TutorialContestSummer2012.pdf]]
*Download the data http://www.spl.harvard.edu/publications/bitstream/download/5276

WebGLExport TutorialContestSummer2012

2012-06-15T17:04:47Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides File:WebGLExport_TutorialContestSummer2012.pdf
*Download the data http://www.spl.harvard.edu/publications/bitstream/download/5276

File:WebGLExport TutorialContestSummer2012.pdf

2012-06-15T17:04:28Z

Nicolas.rannou: WebGLExport Tutorial Contest Summer 2012

WebGLExport Tutorial Contest Summer 2012

WebGLExport TutorialContestSummer2012

2012-06-15T16:36:12Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides
*Download the data http://www.spl.harvard.edu/publications/bitstream/download/5276

WebGLExport TutorialContestSummer2012

2012-06-15T16:35:39Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[http://www.spl.harvard.edu/publications/bitstream/download/5276|here]]
*Download the data http://www.spl.harvard.edu/publications/bitstream/download/5276

WebGLExport TutorialContestSummer2012

2012-06-15T16:34:30Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[http://www.spl.harvard.edu/publications/bitstream/download/5276|here]]
*Download the data [[http://www.spl.harvard.edu/publications/bitstream/download/5276|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:33:14Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[here|here]]
*Download the data [[http://www.spl.harvard.edu/publications/bitstream/download/5276]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:32:59Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[here|here]]
*Download the data [[http://www.spl.harvard.edu/publications/bitstream/download/5276|data]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:32:49Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[here|here]]
*Download the data [[http://www.spl.harvard.edu/publications/bitstream/download/5276|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:32:30Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[here|here]]
*Download the data [[here|http://www.spl.harvard.edu/publications/bitstream/download/5276]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:32:14Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[here|here]]
*Download the data [[http://www.spl.harvard.edu/publications/bitstream/download/5276|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:32:04Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
*Download the slides [[here|here]]
*Download the data [[http://www.spl.harvard.edu/publications/bitstream/download/5276
|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:31:46Z

Nicolas.rannou: /* Ressources */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =
Download the slides [[here|here]]
Download the data [[here|http://www.spl.harvard.edu/publications/bitstream/download/5276
]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:30:18Z

Nicolas.rannou:

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:29:58Z

Nicolas.rannou:

[[File:Webglexport.png|thumb|100px]]
= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:29:28Z

Nicolas.rannou:

[[File:Webglexport.png|thumb|200px]]
= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:29:12Z

Nicolas.rannou: /* Overview */

= Overview =
Export data from Slicer to visualize it in a web browser
[[File:Webglexport.png|thumb|200px]]

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:28:29Z

Nicolas.rannou: /* Overview */

= Overview =
Export data from Slicer to visualize it in a web browser
[[File:Webglexport.png|200px]]

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:28:19Z

Nicolas.rannou: /* Overview */

= Overview =
Export data from Slicer to visualize it in a web browser
[[File:Webglexport.png|50px]]

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:27:56Z

Nicolas.rannou: /* Overview */

= Overview =
Export data from Slicer to visualize it in a web browser
[[File:Webglexport.png]]

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:27:41Z

Nicolas.rannou: /* Overview */

= Overview =
Export data from Slicer to visualize it in a web browser
File:Webglexport.png

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

File:Webglexport.png

2012-06-15T16:26:41Z

Nicolas.rannou: Webglexport tutorial contest summer 2012 illustration

Webglexport tutorial contest summer 2012 illustration

WebGLExport TutorialContestSummer2012

2012-06-15T16:23:20Z

Nicolas.rannou: /* Testing */

= Overview =
Export data from Slicer to visualize it in a web browser

'''Audience:''' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| WebgGL Export || Mac OS - Lion || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Windows XP 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
| WebgGL Export || Linux Ubuntu 64 bit || 4.1 || 06-15-2012 || Nicolas Rannou || OK
|-
|}
</table>

= Ressources =

Download the slides [[here|here]]

WebGLExport TutorialContestSummer2012

2012-06-15T16:19:43Z

Nicolas.rannou: /* Overview */

WebGLExport TutorialContestSummer2012

2012-06-15T16:19:37Z

Nicolas.rannou: /* Overview */

= Overview =
Export data from Slicer to visualize it in a web browser

''Audience:'' End-users

= Testing =
<table>
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
|-
|'''Tutorial Name'''||'''Platform'''||'''Slicer Version'''||'''Test Date'''||'''Author''' ||'''Test results (Mantis Links if tests failed)'''
|-
| || Mac OS || || ||
|
|-
| || Windows 7 32 bit || || ||
|
|-
| || Windows 7 64 bit || || ||
|
|-
| || Linux 64 bit || || ||
|
|-
|}
</table>
= Ressources =

Download the slides [[here|here]]