2017-06-22T15:29:46Z

P.zaffino: /* Illustrations */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==

*[http://www.imagenglab.com/pileggi_29.html Giampaolo Pileggi] (Magna Graecia University, Italy/German Cancer Research Center (DKFZ), Germany)
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://isgwww.cs.uni-magdeburg.de/cas/team.php Gino Gulamhussene] (Universität Magdeburg, Germany)
*[http://isgwww.cs.uni-magdeburg.de/isg/meyer.html Anneke Meyer] (Universität Magdeburg, Germany)

==Project Description==
This tool allows the user to generate an HU map (Pseudo-CT) from T1/T2 input MRI. The tool is still in the early development stages with good early results in terms of Mean Absolute Error and Bias.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|
The main object is to understand which topology of CNN is the most suited for the Pseudo-CT generation task.
|
Test of different structures with training on low-res images in order to speed-up computational time.
Analysis of the different output with MAE and Bias metrics
|
TBD
|}

==Illustrations==
http://www.slicer.org/img/Slicer4Announcement-HiRes.png

==Background and References==

Project Week 25/CNN for PseudoCT Generation from T1T2 MR

2017-06-22T15:28:58Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==

*[http://www.imagenglab.com/pileggi_29.html Giampaolo Pileggi] (Magna Graecia University, Italy/German Cancer Research Center (DKFZ), Germany)
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://isgwww.cs.uni-magdeburg.de/cas/team.php Gino Gulamhussene] (Universität Magdeburg, Germany)
*[http://isgwww.cs.uni-magdeburg.de/isg/meyer.html Anneke Meyer] (Universität Magdeburg, Germany)

==Project Description==
This tool allows the user to generate an HU map (Pseudo-CT) from T1/T2 input MRI. The tool is still in the early development stages with good early results in terms of Mean Absolute Error and Bias.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|
The main object is to understand which topology of CNN is the most suited for the Pseudo-CT generation task.
|
Test of different structures with training on low-res images in order to speed-up computational time.
Analysis of the different output with MAE and Bias metrics
|
TBD
|}

==Illustrations==
http://www.slicer.org/img/Slicer4Announcement-HiRes.png

<embedvideo service="youtube">https://www.youtube.com/watch?v=MKLWzD0PiIc</embedvideo>

==Background and References==

Project Week 25/NeedleSegmentation

2017-06-22T15:09:30Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentations.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Refine/clear the segmentations coming from the CNN algorithm.
* Figure out how to transfer MRIs to a server hosting the CNN code and get back the results.
|

* Clustering and morphological filters for data cleaning.
* Talk with someone from the core team to figure out how to remotely process the data.
|

TDB
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

Project Week 25/NeedleSegmentation

2017-06-22T15:08:25Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentations.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Refine/clear the segmentations coming from the CNN algorithm.
* Figure out how to transfer MRIs to a server hosting the CNN code and how to get back the results.
|

* Clustering and morphological filter for data cleaning.
* Talk with someone of core team to figure out how to remotely process the data.
|

TDB
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

Project Week 25/NeedleSegmentation

2017-06-22T07:12:11Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentations.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Refine/clear the segmentations coming from the CNN algorithm.
* Figure out how to transfer MRIs to some server hosting the CNN code and how to get back the results.
|

* Clustering and morphological filter for data cleaning.
* Talk with someone of core team to figure out how to remotely process the data.
|

TDB
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

Project Week 25/NeedleSegmentation

2017-06-22T07:09:16Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentations.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Refine/clear the segmentations coming from the CNN algorithm.
* Figure out how to transfer MRIs to some server hosting the CNN code and how to get back the results.
|

Please start each sentence in a new line.

|

TDB
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

Project Week 25/NeedleSegmentation

2017-06-22T07:07:25Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentations.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

* Refine/clear the segmentations coming from the CNN algorithm
|

Please start each sentence in a new line.

|

TDB
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

Project Week 25/NeedleSegmentation

2017-06-22T07:05:01Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentation.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

Please start each sentence in a new line.
|

Please start each sentence in a new line.

|

TDB
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

Project Week 25/NeedleSegmentation

2017-06-22T07:02:36Z

P.zaffino: /* Project Description */

__NOTOC__

Back to [[Project_Week_25#Projects|Projects List]]

==Key Investigators==
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino] (Magna Graecia University, Italy)
*[http://www.imagenglab.com/newsite/salvatore_scaramuzzino/ Salvatore Scaramuzzino] (Magna Graecia University/ASL Vercelli, Italy)
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea] (Magna Graecia University, Italy)
*[http://www.imperial.ac.uk/people/g.pernelle14 Guillaume Pernelle] (remote) (Imperial College, London, UK)
*[http://www.spl.harvard.edu/pages/People/mehrtash Alireza Mehrtash] (remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
*[http://www.spl.harvard.edu/pages/People/tkapur Tina Kapur] (Brigham and Women's Hospital, Harvard Medical School, USA)

==Project Description==

NeedleFinder offers tools to segment needles from MRI/CT. It has mostly been tested on MRI from GYN brachytherapy cases. Anyway, this tool requires manual interaction.
Now we want to develop a completely automatic strategy to segment the needles.
For this purpose, we tested a CNN approach that provides good results, even if a post processing step must be implemented in order to remove some noise and to refine the obtained segmentation.

{| class="wikitable"
! style="text-align: left; width:27%" | Objective
! style="text-align: left; width:27%" | Approach and Plan
! style="text-align: left; width:27%" | Progress and Next Steps
|- style="vertical-align:top;"
|

Please start each sentence in a new line.
|

Please start each sentence in a new line.

|

Please start each sentence in a new line.
|}

==Illustrations==

http://needlefinder.org/assets/images/home_cropped.jpg

<embedvideo service="youtube">https://youtu.be/5G9t6DZ8KrM</embedvideo>

==Background and References==


#[http://www.needlefinder.org NeedleFinder website]
#[https://arxiv.org/abs/1705.06712 Model-based Catheter Segmentation in MRI-images]

P.zaffino: /* Registrants */

__NOTOC__
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW25.png|300px]] [[image:IEL_logo.png|225px]]
 

=Welcome to the web page for the 25th Project Week!=

It is a pleasure to announce that the 25th Project week will be held in [https://goo.gl/maps/b9CpkFxNyWN2 Catanzaro Lido] (Calabria, Italy) on June 26-30, 2017. This is the first time in Italy for the Slicer Community, and the event is organized in cooperation with [http://www.imagenglab.com ImagEngLab]. Catanzaro Lido is a city on the Ionian Sea, in the middle of Squillace Gulf where, according to the ancient legend, Odysseus started his journey back to Ithaca. Of course bring your swimsuit...the conference room and the hotel are 20 meters far away from the beach!

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

===Local Organizing Committee===
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea, PhD]
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino, PhD].

==Hangouts for preparation==
#(Tina Kapur) Hangout #1: April 5th, 2017 - 9.00 AM Boston time: [https://plus.google.com/events/cjh9ag37hm1e7peplatphl7kh2g?authkey=COWc5cKc77jymgE event page] ([[PW25 Hangouts Notes|Notes]])
#(Steve Pieper) Hangout #2: Wednesday April 12, 2017, 9am EDT (GMT-4): Web browser based computing: Dockerized Slicer with remote computing and GPU computing; Cornerstone/LesionTracker OHIF; XTK->AMI (threejs); ePad; vtk.js; QWebEngine; [https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Andras Lasso) Hangout #3: Wednesday April 19, 2017, 9am EDT (GMT-4) Connecting devices such as surgical navigation, ultrasound, 3D Slicer, PLUS, OpenIGTLink, Augmented reality; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Tina Kapur) Hangout #4: Wednesday April 26, 2017, 9am EDT (GMT-4) Deep Learning for Detection of Cancer and Instruments; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page];
#(Simon Drouin) Hangout #5: Wednesday May 3, 2017, 9am EDT (GMT-4)Volume Rendering, Augmented Reality, and Virtual Reality. [https://docs.google.com/document/d/1UwdSzjnDm1yEeQ44OEhXWbH6V83Uo1Cd4KngxoyrRdI/edit Notes];[https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Tina Kapur) Hangout #6: Wednesday May 10, 2017, 9am EDT (GMT-4) For new participants: What is project week and how to get the most out of participating in it? [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Andrey Fedorov) Hangout #7: Wednesday May 17, 2017, 9am EDT (GMT-4) DICOM for Quantitative Imaging and integration with processing applications. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page] ([http://bit.ly/2017NSPW-DICOM notes])
#(Tina Kapur) Hangout #8: Wednesday May 24, 2017, 9am EDT (GMT-4) Review of Projects and teams that have been provided on the wiki page by participants, internationalization strategy for Slicer. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Francesca Spadea) Hangout #9: Wednesday May 31, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees should join [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #10: Wednesday June 7, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #11: Wednesday June 14, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(Francesca Spadea) Hangout #12: Wednesday June 21, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees with questions should join [https://zoom.us/j/879371330 zoom "hangout" page]

==Logistics==

*'''Dates:''' June 26-30, 2017. Consider staying for one more day (leaving Sunday morning), as a day off in a gorgeous sea place is planned on July 1st. More details in the calendar below.
*'''Location:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]
**[mailto:prenotazioni@hotelperladelporto.it Booking]. Subject line: "Slicer Summer Project Week 2017".
***Special rates are:
****Single room, full bed, 79 € per night (1 person)
****Single room, queen bed 89 € per night (1 person)
****Double room, queen bed 99 € per night (2 people)
****Triple room, 110 € (3 people)
*'''REGISTRATION:''' To register please visit this [http://www.imagenglab.com/newsite/project-week page]
*'''Registration Fee:''' 320€ and it includes lunches, coffee breaks and airport connections
*'''Hotel:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]. The closest airport is [http://www.lameziaairport.it/english/ Lamezia Terme Airport (IATA: SUF)].
*'''Transportation from Airport to Hotel''' Your registration fee includes ground transportation [https://www.google.com/maps/dir/Lamezia+Terme+International+Airport,+Via+Aeroporto,+88046+Lamezia+Terme+CZ,+Italy/BEST+WESTERN+PLUS+Hotel+Perla+Del+Porto,+Via+Martiri+di+Cefalonia,+64,+88100+Catanzaro,+Italy/@38.868758,16.1564814,10z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x133fe15a3cbed47f:0x544ab120c3de78a6!2m2!1d16.2434017!2d38.9065845!1m5!1m1!1s0x134003d668252a13:0x2989caf676f45a72!2m2!1d16.6312407!2d38.827712!3e0 to/from the hotel and airport].
** Please fill out this form to request transportation https://goo.gl/forms/7vmhxZSHy8Z1A62z2
*'''Local points of interest (pubs, restaurants, bar):''' [https://www.google.com/maps/d/viewer?mid=1FU63ik9Do3zzP6K2kvLVTtM2at8&ll=38.86221979925013%2C16.44292274999998&z=12 map (constantly updated)]

==Calendar==

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NA-MIC Project Week (Timezone is Italy / GMT+02.)
|view=WEEK
|dates=20170626/20170701
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

=Projects=

Please put a brief preliminary title for your project here with some names in parenthesis for potential team members

#Needle segmentation Project 1 (Guillaume Pernelle, Tina Kapur, Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea)
#Needle segmentation Project 2 (Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea, Guillaume Pernelle, Tina Kapur)
#DICOM Segmentation support for Cornerstone / OHIF Viewer (Erik Ziegler, Steve Pieper, Marco Nolden, Tina Kapur)
#Conversion of DICOM single frame MR to Enhanced Multiframe (Michael Onken, Steve Pieper, Andras Lasso, Csaba Pinter)
#Human-Computer Interaction under sterile conditions (Christian Hansen, Julian Hettig, Benjamin Hatscher, David Black, Marco Nolden, Juan Ruiz)
#Development and evaluation of new AR visualization techniques to support radiological interventions (Christian Hansen, Florian Heinrich, Andrè Mewes, Juan Ruiz, Marco Nolden)
#Interactive manipulation of plots and graphs: i) panning; ii) click and drag; iii) data selection (Davide Punzo, Steve Pieper, Jean-Christophe Fillion-Robin)
#Next generation of volume rendering in VTK (Simon Drouin, Steve Pieper, Ole Vegard Solberg, Andras Lasso)
#Tracked Ultrasound Standardization IV: Controlling US acquisition (Simon Drouin, Ole Vegard Solberg, Csaba Pinter, Andras Lasso [electronically: Longquan Chen, Adam Rankin])
#Steerable catheters path planner extension for brain surgery applications (Alberto Favaro, Marlene Pinzi)
#Improving depth perception in interventional Augmented Reality visualization/(+sonification?) (Simon Drouin, Christian Hansen, David Black)
#DICOM for Quantitative Imaging and integration with processing applications (Jasmin Metzger, Marco Nolden, Steve Pieper)
#Intra-operative deformable registration based on dense point cloud reconstruction (Sara Moccia, Andre Mewes, Gino Gulamhussene, Florian Heinrich)
#Segmentation for improving image registration of preoperative MRI/intraoperative ultrasound images for neuro-navigation (Jennifer Nitsch, Scheherazade Kraß)
#CNN for pseudoCT generation from T1/T2 MRI (Giampaolo Pileggi, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Gino Gulamhussene, Anneke Meyer)
#Internationalizing Slicer modules (Juan Ruiz Alzola, )
#Interfacing Slicer to mobile phone-controlled sensors (Juan Ruiz Alzola, )
#Slicer and 3D Printing (Juan Ruiz Alzola, Mike Halle, Christian Hansen)
#Slicer export to VR (Juan Ruiz Alzola, Mike Halle,)
#Deep Learning: Data augmentation for prostate segmentation (Anneke Meyer, Christian Hansen, Andrey Federov)
#2D Slice to 3D volume registration to support radiologic interventions (Gino Gulamhussene,)

=Registrants=

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [http://www.imagenglab.com/newsite/project-week/ registration site].

# Kikinis, Ron :: Brigham and Women's Hospital, Harvard Medical School, USA
# Pieper, Steve :: Isomics, Inc., USA
# Kapur, Tina :: Brigham and Women's Hospital, Harvard Medical School, USA
# Spadea, Maria Francesca :: Magna Graecia University, Italy
# Zaffino, Paolo :: Magna Graecia University, Italy
# Scaramuzzino, Salvatore :: Magna Graecia University/ASL Vercelli, Italy
# Pileggi, Giampaolo :: Magna Graecia University, Italy/DKFZ, Germany
# Rackerseder, Julia :: Technische Universität München, Germany
# Pinter, Csaba :: Queen's University, Canada
# Kraß, Scheherazade :: University of Bremen, Germany
# Gerig, Guido :: NYU Tandon School of Engineering, USA
# Punzo, Davide :: Kapteyn Astronomical Institute, Netherlands
# Drouin, Simon :: NeuroImaging and Surgical Technologies (NIST) Lab, Canada
# Lasso, Andras :: School of Computing, Queen's University, Canada
# Favaro, Alberto :: Politecnico di Milano, Italy
# Leger, Etienne :: Concordia University, Canada
# Ziegler, Erik :: Ziegler Consult SAS
# Onken, Michael :: Open Connections GmbH, Germany
# Pinzi, Marlene :: Imperial College, UK
# Nitsch, Jennifer :: University Of Bremen, Germany
# Moccia, Sara :: Politecnico di Milano, Italy
# Black, David :: Fraunhofer Institute for Medical Image Computing MEVIS, Bremen, Germany
# Penzkofer, Tobias :: Charité Universitätsmedizin, Berlin, Germany
# Hansen, Christian :: Universität Magdeburg, Germany
# Vegard Solberg, Ole :: Norway
# Heinrich, Florian :: Universität Magdeburg, Germany
# Mewes, André :: Universität Magdeburg, Germany
# Hatscher, Benjamin :: Universität Magdeburg, Germany
# Hettig, Julian :: Universität Magdeburg, Germany
# Meyer, Anneke :: Universität Magdeburg, Germany
# Gulamhussene, Gino :: Universität Magdeburg, Germany
# Cassetta, Roberto :: Politecnico di Milano, Italy
# Fillion-Robin, Jean-Christophe :: Kitware, USA
# Metzger, Jasmin :: DKFZ, Germany

File:File graph GraphVizExtensionDummy dot.svg

2017-06-02T15:23:40Z

P.zaffino: generated by the GraphViz extension from the File page

File:File graph GraphVizExtensionDummy dot.svg

2017-06-02T15:23:40Z

P.zaffino: generated by the GraphViz extension from the File:File graph GraphVizExtensionDummy dot.svg page

[[Category:GraphViz]][[Category:GraphViz dot]]

Project Week 25

2017-05-31T14:34:13Z

P.zaffino: /* Registrants */

__NOTOC__
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW25.png|300px]] [[image:IEL_logo.png|225px]]
 

=Welcome to the web page for the 25th Project Week!=

It is a pleasure to announce that the 25th Project week will be held in [https://goo.gl/maps/b9CpkFxNyWN2 Catanzaro Lido] (Calabria, Italy) on June 26-30, 2017. This is the first time in Italy for the Slicer Community, and the event is organized in cooperation with [http://www.imagenglab.com ImagEngLab]. Catanzaro Lido is a city on the Ionian Sea, in the middle of Squillace Gulf where, according to the ancient legend, Odysseus started his journey back to Ithaca. Of course bring your swimsuit...the conference room and the hotel are 20 meters far away from the beach!

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

===Local Organizing Committee===
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea, PhD]
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino, PhD].

==Hangouts for preparation==
#(Tina Kapur) Hangout #1: April 5th, 2017 - 9.00 AM Boston time: [https://plus.google.com/events/cjh9ag37hm1e7peplatphl7kh2g?authkey=COWc5cKc77jymgE event page] ([[PW25 Hangouts Notes|Notes]])
#(Steve Pieper) Hangout #2: Wednesday April 12, 2017, 9am EDT (GMT-4): Web browser based computing: Dockerized Slicer with remote computing and GPU computing; Cornerstone/LesionTracker OHIF; XTK->AMI (threejs); ePad; vtk.js; QWebEngine; [https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Andras Lasso) Hangout #3: Wednesday April 19, 2017, 9am EDT (GMT-4) Connecting devices such as surgical navigation, ultrasound, 3D Slicer, PLUS, OpenIGTLink, Augmented reality; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Tina Kapur) Hangout #4: Wednesday April 26, 2017, 9am EDT (GMT-4) Deep Learning for Detection of Cancer and Instruments; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page];
#(Simon Drouin) Hangout #5: Wednesday May 3, 2017, 9am EDT (GMT-4)Volume Rendering, Augmented Reality, and Virtual Reality. [https://docs.google.com/document/d/1UwdSzjnDm1yEeQ44OEhXWbH6V83Uo1Cd4KngxoyrRdI/edit Notes];[https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Tina Kapur) Hangout #6: Wednesday May 10, 2017, 9am EDT (GMT-4) For new participants: What is project week and how to get the most out of participating in it? [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Andrey Fedorov) Hangout #7: Wednesday May 17, 2017, 9am EDT (GMT-4) DICOM for Quantitative Imaging and integration with processing applications. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page] ([http://bit.ly/2017NSPW-DICOM notes])
#(Tina Kapur) Hangout #8: Wednesday May 24, 2017, 9am EDT (GMT-4) Review of Projects and teams that have been provided on the wiki page by participants, internationalization strategy for Slicer. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Francesca Spadea) Hangout #9: Wednesday May 31, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees should join [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #10: Wednesday June 7, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #11: Wednesday June 14, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(Francesca Spadea) Hangout #12: Wednesday June 21, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees with questions should join [https://zoom.us/j/879371330 zoom "hangout" page]

==Logistics==

*'''Dates:''' June 26-30, 2017. Consider staying for one more day (leaving Sunday morning), as a day off in a gorgeous sea place is planned on July 1st. More details in the calendar below.
*'''Location:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]
**[mailto:prenotazioni@hotelperladelporto.it Booking]. Subject line: "Slicer Summer Project Week 2017".
***Special rates are:
****Single room, full bed, 79 € per night (1 person)
****Single room, queen bed 89 € per night (1 person)
****Double room, queen bed 99 € per night (2 people)
****Triple room, 110 € (3 people)
*'''REGISTRATION:''' To register please visit this [http://www.imagenglab.com/newsite/project-week page]
*'''Registration Fee:''' 320€ and it includes lunches, coffee breaks and airport connections
*'''Hotel:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]. The closest airport is [http://www.lameziaairport.it/english/ Lamezia Terme Airport (IATA: SUF)].
*'''Transportation from Airport to Hotel''' Your registration fee includes ground transportation [https://www.google.com/maps/dir/Lamezia+Terme+International+Airport,+Via+Aeroporto,+88046+Lamezia+Terme+CZ,+Italy/BEST+WESTERN+PLUS+Hotel+Perla+Del+Porto,+Via+Martiri+di+Cefalonia,+64,+88100+Catanzaro,+Italy/@38.868758,16.1564814,10z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x133fe15a3cbed47f:0x544ab120c3de78a6!2m2!1d16.2434017!2d38.9065845!1m5!1m1!1s0x134003d668252a13:0x2989caf676f45a72!2m2!1d16.6312407!2d38.827712!3e0 to/from the hotel and airport].
** Please fill out this form to request transportation https://goo.gl/forms/7vmhxZSHy8Z1A62z2
*'''Local points of interest (pubs, restaurants, bar):''' [https://www.google.com/maps/d/viewer?mid=1FU63ik9Do3zzP6K2kvLVTtM2at8&ll=38.86221979925013%2C16.44292274999998&z=12 map (constantly updated)]

==Calendar==

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NA-MIC Project Week (Timezone is Italy / GMT+02.)
|view=WEEK
|dates=20170626/20170701
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

=Projects=

Please put a brief preliminary title for your project here with some names in parenthesis for potential team members

#Needle segmentation Project 1 (Guillaume Pernelle, Tina Kapur, Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea)
#Needle segmentation Project 2 (Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea, Guillaume Pernelle, Tina Kapur)
#DICOM Segmentation support for Cornerstone / OHIF Viewer (Erik Ziegler, Steve Pieper, Marco Nolden, Tina Kapur)
#Conversion of DICOM single frame MR to Enhanced Multiframe (Michael Onken, Steve Pieper, Andras Lasso, Csaba Pinter)
#Human-Computer Interaction under sterile conditions (Christian Hansen, Julian Hettig, Benjamin Hatscher, David Black, Marco Nolden, Juan Ruiz)
#Development and evaluation of new AR visualization techniques to support radiological interventions (Christian Hansen, Florian Heinrich, Andrè Mewes, Juan Ruiz, Marco Nolden)
#Interactive manipulation of plots and graphs: i) panning; ii) click and drag; iii) data selection (Davide Punzo, Steve Pieper, Jean-Christophe Fillion-Robin)
#Next generation of volume rendering in VTK (Simon Drouin, Steve Pieper, Ole Vegard Solberg, Andras Lasso)
#Tracked Ultrasound Standardization IV: Controlling US acquisition (Simon Drouin, Ole Vegard Solberg, Andras Lasso [electronically: Longquan Chen, Adam Rankin])
#Steerable catheters path planner extension for brain surgery applications (Alberto Favaro, Marlene Pinzi)
#Improving depth perception in interventional Augmented Reality visualization/(+sonification?) (Simon Drouin, Christian Hansen, David Black)
#DICOM for Quantitative Imaging and integration with processing applications (Jasmin Metzger, Marco Nolden, Steve Pieper)
#Intra-operative deformable registration based on dense point cloud reconstruction (Sara Moccia, Andre Mewes, Gino Gulamhussene, Florian Heinrich)
#Segmentation for improving image registration of preoperative MRI/intraoperative ultrasound images for neuro-navigation (Jennifer Nitsch, Scheherazade Kraß)
#CNN for pseudoCT generation from T1/T2 MRI (Giampaolo Pileggi, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Gino Gulamhussene, Anneke Meyer)
#Internationalizing Slicer modules (Juan Ruiz Alzola, )
#Interfacing Slicer to mobile phone-controlled sensors (Juan Ruiz Alzola, )
#Slicer and 3D Printing (Juan Ruiz Alzola, Mike Halle, Christian Hansen)
#Slicer export to VR (Juan Ruiz Alzola, Mike Halle,)
#Deep Learning: Data augmentation for prostate segmentation (Anneke Meyer, Christian Hansen, Andrey Federov)
#2D Slice to 3D volume registration to support radiologic interventions (Gino Gulamhussene,)

=Registrants=

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [http://www.imagenglab.com/newsite/project-week/ registration site].

# Kikinis, Ron :: Brigham and Women's Hospital, Harvard Medical School, USA
# Pieper, Steve :: Isomics, Inc., USA
# Kapur, Tina :: Brigham and Women's Hospital, Harvard Medical School, USA
# Spadea, Maria Francesca :: Magna Graecia University, Italy
# Zaffino, Paolo :: Magna Graecia University, Italy
# Scaramuzzino, Salvatore :: Magna Graecia University/ASL Vercelli, Italy
# Pileggi, Giampaolo :: Magna Graecia University, Italy/DKFZ, Germany
# Rackerseder, Julia :: Technische Universität München, Germany
# Pinter, Csaba :: Queen's University, Canada
# Kraß, Scheherazade :: University of Bremen, Germany
# Gerig, Guido :: NYU Tandon School of Engineering, USA
# Punzo, Davide :: Kapteyn Astronomical Institute, Netherlands
# Drouin, Simon :: NeuroImaging and Surgical Technologies (NIST) Lab, Canada
# Lasso, Andras :: School of Computing, Queen's University, Canada
# Favaro, Alberto :: Politecnico di Milano, Italy
# Leger, Etienne :: Concordia University, Canada
# Ziegler, Erik :: Ziegler Consult SAS
# Onken, Michael :: Open Connections GmbH, Germany
# Pinzi, Marlene :: Imperial College, UK
# Nitsch, Jennifer :: University Of Bremen, Germany
# Moccia, Sara :: Politecnico di Milano, Italy
# Black, David :: Fraunhofer Institute for Medical Image Computing MEVIS, Bremen, Germany
# Penzkofer, Tobias :: Charité Universitätsmedizin, Berlin, Germany
# Hansen, Christian :: Universität Magdeburg, Germany
# Vegard Solberg, Ole :: Norway
# Heinrich, Florian :: Universität Magdeburg, Germany
# Mewes, André :: Universität Magdeburg, Germany
# Hatscher, Benjamin :: Universität Magdeburg, Germany
# Hettig, Julian :: Universität Magdeburg, Germany
# Meyer, Anneke :: Universität Magdeburg, Germany
# Gulamhussene, Gino :: Universität Magdeburg, Germany
# Cassetta, Roberto :: Politecnico di Milano, Italy
# Fillion-Robin, Jean-Christophe :: Kitware, USA

Project Week 25

2017-05-31T14:33:55Z

P.zaffino: /* Registrants */

__NOTOC__
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW25.png|300px]] [[image:IEL_logo.png|225px]]
 

=Welcome to the web page for the 25th Project Week!=

It is a pleasure to announce that the 25th Project week will be held in [https://goo.gl/maps/b9CpkFxNyWN2 Catanzaro Lido] (Calabria, Italy) on June 26-30, 2017. This is the first time in Italy for the Slicer Community, and the event is organized in cooperation with [http://www.imagenglab.com ImagEngLab]. Catanzaro Lido is a city on the Ionian Sea, in the middle of Squillace Gulf where, according to the ancient legend, Odysseus started his journey back to Ithaca. Of course bring your swimsuit...the conference room and the hotel are 20 meters far away from the beach!

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

===Local Organizing Committee===
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea, PhD]
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino, PhD].

==Hangouts for preparation==
#(Tina Kapur) Hangout #1: April 5th, 2017 - 9.00 AM Boston time: [https://plus.google.com/events/cjh9ag37hm1e7peplatphl7kh2g?authkey=COWc5cKc77jymgE event page] ([[PW25 Hangouts Notes|Notes]])
#(Steve Pieper) Hangout #2: Wednesday April 12, 2017, 9am EDT (GMT-4): Web browser based computing: Dockerized Slicer with remote computing and GPU computing; Cornerstone/LesionTracker OHIF; XTK->AMI (threejs); ePad; vtk.js; QWebEngine; [https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Andras Lasso) Hangout #3: Wednesday April 19, 2017, 9am EDT (GMT-4) Connecting devices such as surgical navigation, ultrasound, 3D Slicer, PLUS, OpenIGTLink, Augmented reality; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Tina Kapur) Hangout #4: Wednesday April 26, 2017, 9am EDT (GMT-4) Deep Learning for Detection of Cancer and Instruments; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page];
#(Simon Drouin) Hangout #5: Wednesday May 3, 2017, 9am EDT (GMT-4)Volume Rendering, Augmented Reality, and Virtual Reality. [https://docs.google.com/document/d/1UwdSzjnDm1yEeQ44OEhXWbH6V83Uo1Cd4KngxoyrRdI/edit Notes];[https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Tina Kapur) Hangout #6: Wednesday May 10, 2017, 9am EDT (GMT-4) For new participants: What is project week and how to get the most out of participating in it? [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Andrey Fedorov) Hangout #7: Wednesday May 17, 2017, 9am EDT (GMT-4) DICOM for Quantitative Imaging and integration with processing applications. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page] ([http://bit.ly/2017NSPW-DICOM notes])
#(Tina Kapur) Hangout #8: Wednesday May 24, 2017, 9am EDT (GMT-4) Review of Projects and teams that have been provided on the wiki page by participants, internationalization strategy for Slicer. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Francesca Spadea) Hangout #9: Wednesday May 31, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees should join [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #10: Wednesday June 7, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #11: Wednesday June 14, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(Francesca Spadea) Hangout #12: Wednesday June 21, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees with questions should join [https://zoom.us/j/879371330 zoom "hangout" page]

==Logistics==

*'''Dates:''' June 26-30, 2017. Consider staying for one more day (leaving Sunday morning), as a day off in a gorgeous sea place is planned on July 1st. More details in the calendar below.
*'''Location:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]
**[mailto:prenotazioni@hotelperladelporto.it Booking]. Subject line: "Slicer Summer Project Week 2017".
***Special rates are:
****Single room, full bed, 79 € per night (1 person)
****Single room, queen bed 89 € per night (1 person)
****Double room, queen bed 99 € per night (2 people)
****Triple room, 110 € (3 people)
*'''REGISTRATION:''' To register please visit this [http://www.imagenglab.com/newsite/project-week page]
*'''Registration Fee:''' 320€ and it includes lunches, coffee breaks and airport connections
*'''Hotel:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]. The closest airport is [http://www.lameziaairport.it/english/ Lamezia Terme Airport (IATA: SUF)].
*'''Transportation from Airport to Hotel''' Your registration fee includes ground transportation [https://www.google.com/maps/dir/Lamezia+Terme+International+Airport,+Via+Aeroporto,+88046+Lamezia+Terme+CZ,+Italy/BEST+WESTERN+PLUS+Hotel+Perla+Del+Porto,+Via+Martiri+di+Cefalonia,+64,+88100+Catanzaro,+Italy/@38.868758,16.1564814,10z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x133fe15a3cbed47f:0x544ab120c3de78a6!2m2!1d16.2434017!2d38.9065845!1m5!1m1!1s0x134003d668252a13:0x2989caf676f45a72!2m2!1d16.6312407!2d38.827712!3e0 to/from the hotel and airport].
** Please fill out this form to request transportation https://goo.gl/forms/7vmhxZSHy8Z1A62z2
*'''Local points of interest (pubs, restaurants, bar):''' [https://www.google.com/maps/d/viewer?mid=1FU63ik9Do3zzP6K2kvLVTtM2at8&ll=38.86221979925013%2C16.44292274999998&z=12 map (constantly updated)]

==Calendar==

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NA-MIC Project Week (Timezone is Italy / GMT+02.)
|view=WEEK
|dates=20170626/20170701
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

=Projects=

Please put a brief preliminary title for your project here with some names in parenthesis for potential team members

#Needle segmentation Project 1 (Guillaume Pernelle, Tina Kapur, Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea)
#Needle segmentation Project 2 (Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea, Guillaume Pernelle, Tina Kapur)
#DICOM Segmentation support for Cornerstone / OHIF Viewer (Erik Ziegler, Steve Pieper, Marco Nolden, Tina Kapur)
#Conversion of DICOM single frame MR to Enhanced Multiframe (Michael Onken, Steve Pieper, Andras Lasso, Csaba Pinter)
#Human-Computer Interaction under sterile conditions (Christian Hansen, Julian Hettig, Benjamin Hatscher, David Black, Marco Nolden, Juan Ruiz)
#Development and evaluation of new AR visualization techniques to support radiological interventions (Christian Hansen, Florian Heinrich, Andrè Mewes, Juan Ruiz, Marco Nolden)
#Interactive manipulation of plots and graphs: i) panning; ii) click and drag; iii) data selection (Davide Punzo, Steve Pieper, Jean-Christophe Fillion-Robin)
#Next generation of volume rendering in VTK (Simon Drouin, Steve Pieper, Ole Vegard Solberg, Andras Lasso)
#Tracked Ultrasound Standardization IV: Controlling US acquisition (Simon Drouin, Ole Vegard Solberg, Andras Lasso [electronically: Longquan Chen, Adam Rankin])
#Steerable catheters path planner extension for brain surgery applications (Alberto Favaro, Marlene Pinzi)
#Improving depth perception in interventional Augmented Reality visualization/(+sonification?) (Simon Drouin, Christian Hansen, David Black)
#DICOM for Quantitative Imaging and integration with processing applications (Jasmin Metzger, Marco Nolden, Steve Pieper)
#Intra-operative deformable registration based on dense point cloud reconstruction (Sara Moccia, Andre Mewes, Gino Gulamhussene, Florian Heinrich)
#Segmentation for improving image registration of preoperative MRI/intraoperative ultrasound images for neuro-navigation (Jennifer Nitsch, Scheherazade Kraß)
#CNN for pseudoCT generation from T1/T2 MRI (Giampaolo Pileggi, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Gino Gulamhussene, Anneke Meyer)
#Internationalizing Slicer modules (Juan Ruiz Alzola, )
#Interfacing Slicer to mobile phone-controlled sensors (Juan Ruiz Alzola, )
#Slicer and 3D Printing (Juan Ruiz Alzola, Mike Halle, Christian Hansen)
#Slicer export to VR (Juan Ruiz Alzola, Mike Halle,)
#Deep Learning: Data augmentation for prostate segmentation (Anneke Meyer, Christian Hansen, Andrey Federov)
#2D Slice to 3D volume registration to support radiologic interventions (Gino Gulamhussene,)

=Registrants=

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [http://www.imagenglab.com/newsite/project-week/ registration site].

# Kikinis, Ron :: Brigham and Women's Hospital, Harvard Medical School, USA
# Pieper, Steve :: Isomics, Inc., USA
# Kapur, Tina :: Brigham and Women's Hospital, Harvard Medical School, USA
# Spadea, Maria Francesca :: Magna Graecia University, Italy
# Zaffino, Paolo :: Magna Graecia University, Italy
# Scaramuzzino, Salvatore :: Magna Graecia University/ASL Vercelli, Italy
# Pileggi, Giampaolo :: Magna Graecia University, Italy/DKFZ, Germany
# Rackerseder, Julia :: Technische Universität München, Germany
# Pinter, Csaba :: Queen's University, Canada
# Kraß, Scheherazade :: University of Bremen, Germany
# Gerig, Guido :: NYU Tandon School of Engineering, USA
# Punzo, Davide :: Kapteyn Astronomical Institute, Netherlands
# Drouin, Simon :: NeuroImaging and Surgical Technologies (NIST) Lab, Canada
# Lasso, Andras :: School of Computing, Queen's University, Canada
# Favaro, Alberto :: Politecnico di Milano, Italy
# Leger, Etienne :: Concordia University, Canada
# Ziegler, Erik :: Ziegler Consult SAS
# Onken, Michael :: Open Connections GmbH, Germany
# Pinzi, Marlene :: Imperial College, UK
# Nitsch, Jennifer :: University Of Bremen, Germany
# Moccia, Sara :: Politecnico di Milano, Italy
# Black, David :: Fraunhofer Institute for Medical Image Computing MEVIS, Bremen, Germany
# Penzkofer, Tobias :: Charité Universitätsmedizin, Berlin, Germany
# Hansen, Christian :: Universität Magdeburg, Germany
# Vegard Solberg, Ole :: Norway
# Heinrich, Florian :: Universität Magdeburg, Germany
# Mewes, André :: Universität Magdeburg, Germany
# Hatscher, Benjamin :: Universität Magdeburg, Germany
# Hettig, Julian :: Universität Magdeburg, Germany
# Meyer, Anneke :: Universität Magdeburg, Germany
# Gulamhussene, Gino :: Universität Magdeburg, Germany
# Cassetta, Roberto :: Politecnico di Milano, Italy
# Fillion-Robin, Jean-Christophe Fillion-Robin :: Kitware, USA

Project Week 25

2017-05-30T10:24:07Z

P.zaffino: /* Registrants */

__NOTOC__
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW-Summer2017.png|300px]] [[image:IEL_logo.png|225px]]
 

=Welcome to the web page for the 25th Project Week!=

It is a pleasure to announce that the 25th Project week will be held in [https://goo.gl/maps/b9CpkFxNyWN2 Catanzaro Lido] (Calabria, Italy) on June 26-30, 2017. This is the first time in Italy for the Slicer Community, and the event is organized in cooperation with [http://www.imagenglab.com ImagEngLab]. Catanzaro Lido is a city on the Ionian Sea, in the middle of Squillace Gulf where, according to the ancient legend, Odysseus started his journey back to Ithaca. Of course bring your swimsuit...the conference room and the hotel are 20 meters far away from the beach!

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

===Local Organizing Committee===
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea, PhD]
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino, PhD].

==Hangouts for preparation==
#(Tina Kapur) Hangout #1: April 5th, 2017 - 9.00 AM Boston time: [https://plus.google.com/events/cjh9ag37hm1e7peplatphl7kh2g?authkey=COWc5cKc77jymgE event page] ([[PW25 Hangouts Notes|Notes]])
#(Steve Pieper) Hangout #2: Wednesday April 12, 2017, 9am EDT (GMT-4): Web browser based computing: Dockerized Slicer with remote computing and GPU computing; Cornerstone/LesionTracker OHIF; XTK->AMI (threejs); ePad; vtk.js; QWebEngine; [https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Andras Lasso) Hangout #3: Wednesday April 19, 2017, 9am EDT (GMT-4) Connecting devices such as surgical navigation, ultrasound, 3D Slicer, PLUS, OpenIGTLink, Augmented reality; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Tina Kapur) Hangout #4: Wednesday April 26, 2017, 9am EDT (GMT-4) Deep Learning for Detection of Cancer and Instruments; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page];
#(Simon Drouin) Hangout #5: Wednesday May 3, 2017, 9am EDT (GMT-4)Volume Rendering, Augmented Reality, and Virtual Reality. [https://docs.google.com/document/d/1UwdSzjnDm1yEeQ44OEhXWbH6V83Uo1Cd4KngxoyrRdI/edit Notes];[https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Tina Kapur) Hangout #6: Wednesday May 10, 2017, 9am EDT (GMT-4) For new participants: What is project week and how to get the most out of participating in it? [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Andrey Fedorov) Hangout #7: Wednesday May 17, 2017, 9am EDT (GMT-4) DICOM for Quantitative Imaging and integration with processing applications. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page] ([http://bit.ly/2017NSPW-DICOM notes])
#(Tina Kapur) Hangout #8: Wednesday May 24, 2017, 9am EDT (GMT-4) Review of Projects and teams that have been provided on the wiki page by participants, internationalization strategy for Slicer. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Francesca Spadea) Hangout #9: Wednesday May 31, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees should join [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #10: Wednesday June 7, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(TBD) Hangout #11: Wednesday June 14, 2017, 9am EDT (GMT-4) TBD [https://zoom.us/j/879371330 zoom "hangout" page]
#(Francesca Spadea) Hangout #12: Wednesday June 21, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees with questions should join [https://zoom.us/j/879371330 zoom "hangout" page]

==Logistics==

*'''Dates:''' June 26-30, 2017. Consider staying for one more day (leaving Sunday morning), as a day off in a gorgeous sea place is planned on July 1st. More details in the calendar below.
*'''Location:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]
**[mailto:prenotazioni@hotelperladelporto.it Booking]. Subject line: "Slicer Summer Project Week 2017".
***Special rates are:
****Single room, full bed, 79 € per night (1 person)
****Single room, queen bed 89 € per night (1 person)
****Double room, queen bed 99 € per night (2 people)
****Triple room, 110 € (3 people)
*'''REGISTRATION:''' To register please visit this [http://www.imagenglab.com/newsite/project-week page]
*'''Registration Fee:''' 320€ and it includes lunches, coffee breaks and airport connections
*'''Hotel:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]. The closest airport is [http://www.lameziaairport.it/english/ Lamezia Terme Airport (IATA: SUF)].
*'''Transportation from Airport to Hotel''' Your registration fee includes ground transportation [https://www.google.com/maps/dir/Lamezia+Terme+International+Airport,+Via+Aeroporto,+88046+Lamezia+Terme+CZ,+Italy/BEST+WESTERN+PLUS+Hotel+Perla+Del+Porto,+Via+Martiri+di+Cefalonia,+64,+88100+Catanzaro,+Italy/@38.868758,16.1564814,10z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x133fe15a3cbed47f:0x544ab120c3de78a6!2m2!1d16.2434017!2d38.9065845!1m5!1m1!1s0x134003d668252a13:0x2989caf676f45a72!2m2!1d16.6312407!2d38.827712!3e0 to/from the hotel and airport].
** Please fill out this form to request transportation https://goo.gl/forms/7vmhxZSHy8Z1A62z2
*'''Local points of interest (pubs, restaurants, bar):''' [https://www.google.com/maps/d/viewer?mid=1FU63ik9Do3zzP6K2kvLVTtM2at8&ll=38.86221979925013%2C16.44292274999998&z=12 map (constantly updated)]

==Calendar==

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NA-MIC Project Week (Timezone is EDT, Will change to Italy time during that week.)
|view=WEEK
|dates=20170626/20170701
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

=Projects=

Please put a brief preliminary title for your project here with some names in parenthesis for potential team members

#Needle segmentation Project 1 (Guillaume Pernelle, Tina Kapur, Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea)
#Needle segmentation Project 2 (Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea, Guillaume Pernelle, Tina Kapur)
#DICOM Segmentation support for Cornerstone / OHIF Viewer (Erik Ziegler, Steve Pieper, Marco Nolden, Tina Kapur)
#Conversion of DICOM single frame MR to Enhanced Multiframe (Michael Onken, Steve Pieper, Andras Lasso, Csaba Pinter)
#Human-Computer Interaction under sterile conditions (Christian Hansen, Julian Hettig, Benjamin Hatscher, David Black, Marco Nolden, Juan Ruiz)
#Development and evaluation of new AR visualization techniques to support radiological interventions (Christian Hansen, Florian Heinrich, Andrè Mewes, Juan Ruiz, Marco Nolden)
#Interactive manipulation of plots and graphs: i) panning; ii) click and drag; iii) data selection (Davide Punzo, Steve Pieper, Jean-Christophe Fillion-Robin)
#Next generation of volume rendering in VTK (Simon Drouin, Steve Pieper, Ole Vegard Solberg, Andras Lasso)
#Tracked Ultrasound Standardization IV: Controlling US acquisition (Simon Drouin, Ole Vegard Solberg, Andras Lasso [electronically: Longquan Chen, Adam Rankin])
#Steerable catheters path planner extension for brain surgery applications (Alberto Favaro, Marlene Pinzi)
#Improving depth perception in interventional Augmented Reality visualization/(+sonification?) (Simon Drouin, Christian Hansen, David Black)
#DICOM for Quantitative Imaging and integration with processing applications (Jasmin Metzger, Marco Nolden, Steve Pieper)
#Tissue deformation estimation based on dense points cloud reconstruction using stereo images (Sara Moccia)
#Segmentation for improving image registration of preoperative MRI/intraoperative ultrasound images for neuro-navigation (Jennifer Nitsch, Scheherazade Kraß)
#CNN for pseudoCT generation from T1/T2 MRI (Giampaolo Pileggi, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea)
#Internationalizing Slicer modules (Juan Ruiz Alzola, )
#Interfacing Slicer to mobile phone-controlled sensors (Juan Ruiz Alzola, )
#Slicer and 3D Printing (Juan Ruiz Alzola, Mike Halle, )
#Slicer export to VR (Juan Ruiz Alzola, Mike Halle, )

=Registrants=

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [http://www.imagenglab.com/newsite/project-week/ registration site].

# Kikinis, Ron :: Brigham and Women's Hospital, Harvard Medical School, USA
# Pieper, Steve :: Isomics, Inc., USA
# Kapur, Tina :: Brigham and Women's Hospital, Harvard Medical School, USA
# Spadea, Maria Francesca :: Magna Graecia University, Italy
# Zaffino, Paolo :: Magna Graecia University, Italy
# Scaramuzzino, Salvatore :: Magna Graecia University/ASL Vercelli, Italy
# Pileggi, Giampaolo :: Magna Graecia University, Italy/DKFZ, Germany
# Rackerseder, Julia :: Technische Universität München, Germany
# Pinter, Csaba :: Queen's University, Canada
# Kraß, Scheherazade :: University of Bremen, Germany
# Gerig, Guido :: NYU Tandon School of Engineering, USA
# Punzo, Davide :: Kapteyn Astronomical Institute, Netherlands
# Drouin, Simon :: NeuroImaging and Surgical Technologies (NIST) Lab, Canada
# Lasso, Andras :: School of Computing, Queen's University, Canada
# Favaro, Alberto :: Politecnico di Milano, Italy
# Leger, Etienne :: Concordia University, Canada
# Ziegler, Erik :: Ziegler Consult SAS
# Onken, Michael :: Open Connections GmbH, Germany
# Pinzi, Marlene :: Imperial College, UK
# Nitsch, Jennifer :: University Of Bremen, Germany
# Moccia, Sara :: Politecnico di Milano, Italy
# Black, David :: Fraunhofer Institute for Medical Image Computing MEVIS, Bremen, Germany
# Penzkofer, Tobias :: Charité Universitätsmedizin, Berlin, Germany
# Hansen, Christian :: Universität Magdeburg, Germany
# Vegard Solberg, Ole :: Norway
# Heinrich, Florian :: Universität Magdeburg, Germany
# Mewes, André :: Universität Magdeburg, Germany
# Hatscher, Benjamin :: Universität Magdeburg, Germany
# Hettig, Julian :: Universität Magdeburg, Germany
# Meyer, Anneke :: Universität Magdeburg, Germany
# Gulamhussene, Gino :: Universität Magdeburg, Germany
# Cassetta, Roberto :: Politecnico di Milano, Italy

Project Week 25

2017-05-26T15:22:02Z

P.zaffino:

__NOTOC__
Back to [[Events]]

A summary of all past [[Project_Events#Past_Project_Weeks|Project Events]].

[[image:PW-Summer2017.png|300px]] [[image:IEL_logo.png|225px]]
 

=Welcome to the web page for the 25th Project Week!=

It is a pleasure to announce that the 25th Project week will be held in [https://goo.gl/maps/b9CpkFxNyWN2 Catanzaro Lido] (Calabria, Italy) on June 26-30, 2017. This is the first time in Italy for the Slicer Community, and the event is organized in cooperation with [http://www.imagenglab.com ImagEngLab]. Catanzaro Lido is a city on the Ionian Sea, in the middle of Squillace Gulf where, according to the ancient legend, Odysseus started his journey back to Ithaca. Of course bring your swimsuit...the conference room and the hotel are 20 meters far away from the beach!

This project week is an event [[Post-NCBC-2014|endorsed]] by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week [http://public.kitware.com/mailman/listinfo/na-mic-project-week mailing list].

===Local Organizing Committee===
*[http://www.imagenglab.com/newsite/mf_spadea/ Maria Francesca Spadea, PhD]
*[http://www.imagenglab.com/newsite/paolo_zaffino/ Paolo Zaffino, PhD].

==Hangouts for preparation==
#(Tina Kapur) Hangout #1: April 5th, 2017 - 9.00 AM Boston time: [https://plus.google.com/events/cjh9ag37hm1e7peplatphl7kh2g?authkey=COWc5cKc77jymgE event page] ([[PW25 Hangouts Notes|Notes]])
#(Steve Pieper) Hangout #2: Wednesday April 12, 2017, 9am EDT (GMT-4): Web browser based computing: Dockerized Slicer with remote computing and GPU computing; Cornerstone/LesionTracker OHIF; XTK->AMI (threejs); ePad; vtk.js; QWebEngine; [https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Andras Lasso) Hangout #3: Wednesday April 19, 2017, 9am EDT (GMT-4) Connecting devices such as surgical navigation, ultrasound, 3D Slicer, PLUS, OpenIGTLink, Augmented reality; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Tina Kapur) Hangout #4: Wednesday April 26, 2017, 9am EDT (GMT-4) Deep Learning for Detection of Cancer and Instruments; [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page];
#(Simon Drouin) Hangout #5: Wednesday May 3, 2017, 9am EDT (GMT-4)Volume Rendering, Augmented Reality, and Virtual Reality. [https://docs.google.com/document/d/1UwdSzjnDm1yEeQ44OEhXWbH6V83Uo1Cd4KngxoyrRdI/edit Notes];[https://plus.google.com/hangouts/_/kitware.com/pw-25?hceid=a2l0d2FyZS5jb21fc2IwN2kxNzFvbGFjOWFhdmg0NmlyNDk1YzRAZ3JvdXAuY2FsZW5kYXIuZ29vZ2xlLmNvbQ.fffs75fitbu0mvpl3vvmrcqf3s&authuser=0 hangout page]
#(Tina Kapur) Hangout #6: Wednesday May 10, 2017, 9am EDT (GMT-4) For new participants: What is project week and how to get the most out of participating in it? [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Andrey Fedorov) Hangout #7: Wednesday May 17, 2017, 9am EDT (GMT-4) DICOM for Quantitative Imaging and integration with processing applications. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page] ([http://bit.ly/2017NSPW-DICOM notes])
#(Tina Kapur) Hangout #8: Wednesday May 24, 2017, 9am EDT (GMT-4) Review of Projects and teams that have been provided on the wiki page by participants, internationalization strategy for Slicer. [https://hangouts.google.com/hangouts/_/kitware.com/pw-25?authuser=0 hangout page]
#(Francesca Spadea) Hangout #9: Wednesday May 31, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees should join
#(TBD) Hangout #10: Wednesday June 7, 2017, 9am EDT (GMT-4) TBD
#(TBD) Hangout #11: Wednesday June 14, 2017, 9am EDT (GMT-4) TBD
#(Francesca Spadea) Hangout #12: Wednesday June 21, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees with questions should join

==Logistics==

*'''Dates:''' June 26-30, 2017. Consider staying for one more day (leaving Sunday morning), as a day off in a gorgeous sea place is planned on July 1st. More details will be posted soon.
*'''Location:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]
**[mailto:prenotazioni@hotelperladelporto.it Booking]. Subject line: "Slicer Summer Project Week 2017".
***Special rates are:
****Single room, full bed, 79 € per night (1 person)
****Single room, queen bed 89 € per night (1 person)
****Double room, queen bed 99 € per night (2 people)
****Triple room, 110 € (3 people)
*'''REGISTRATION:''' To register please visit this [http://www.imagenglab.com/newsite/project-week page]
*'''Registration Fee:''' 320€ and it includes lunches, coffee breaks and airport connections
*'''Hotel:''' [http://www.hotelperladelporto.it/en/home-page.aspx Perla del Porto Hotel]. The closest airport is [http://www.lameziaairport.it/english/ Lamezia Terme Airport (IATA: SUF)].
*'''Transportation from Airport to Hotel''' Your registration fee includes ground transportation [https://www.google.com/maps/dir/Lamezia+Terme+International+Airport,+Via+Aeroporto,+88046+Lamezia+Terme+CZ,+Italy/BEST+WESTERN+PLUS+Hotel+Perla+Del+Porto,+Via+Martiri+di+Cefalonia,+64,+88100+Catanzaro,+Italy/@38.868758,16.1564814,10z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x133fe15a3cbed47f:0x544ab120c3de78a6!2m2!1d16.2434017!2d38.9065845!1m5!1m1!1s0x134003d668252a13:0x2989caf676f45a72!2m2!1d16.6312407!2d38.827712!3e0 to/from the hotel and airport].
** Please fill out this form to request transportation https://goo.gl/forms/7vmhxZSHy8Z1A62z2
*'''Local points of interest (pubs, restaurants, bar):''' [https://www.google.com/maps/d/viewer?mid=1FU63ik9Do3zzP6K2kvLVTtM2at8&ll=38.86221979925013%2C16.44292274999998&z=12 map (constantly updated)]

==Calendar==

{{#widget:Google Calendar
|id=kitware.com_sb07i171olac9aavh46ir495c4@group.calendar.google.com
|timezone=America/New_York&dates=20170108%2F20170114
|title=NA-MIC Project Week
|view=WEEK
|dates=20170626/20170701
}}

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

=Projects=

Please put a brief preliminary title for your project here with some names in parenthesis for potential team members

#Needle segmentation Project 1 (Guillaume Pernelle, Tina Kapur, Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea)
#Needle segmentation Project 2 (Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea, Guillaume Pernelle, Tina Kapur)
#DICOM Segmentation support for Cornerstone / OHIF Viewer (Erik Ziegler, Steve Pieper, Marco Nolden, Tina Kapur)
#Conversion of DICOM single frame MR to Enhanced Multiframe (Michael Onken, Steve Pieper, Andras Lasso, Csaba Pinter)
#Human-Computer Interaction under sterile conditions (Christian Hansen, Julian Hettig, Benjamin Hatscher, David Black, Marco Nolden, Juan Ruiz)
#Development and evaluation of new AR visualization techniques to support radiological interventions (Christian Hansen, Florian Heinrich, Andrè Mewes, Juan Ruiz, Marco Nolden)
#Interactive manipulation of plots and graphs: i) panning; ii) click and drag; iii) data selection (Davide Punzo, Steve Pieper)
#Next generation of volume rendering in VTK (Simon Drouin, Steve Pieper, Ole Vegard Solberg, Andras Lasso)
#Tracked Ultrasound Standardization IV: Controlling US acquisition (Simon Drouin, Ole Vegard Solberg, Andras Lasso [electronically: Longquan Chen, Adam Rankin])
#Steerable catheters path planner extension for brain surgery applications (Alberto Favaro, Marlene Pinzi)
#Improving depth perception in interventional Augmented Reality visualization/(+sonification?) (Simon Drouin, Christian Hansen, David Black)
#DICOM for Quantitative Imaging and integration with processing applications (Jasmin Metzger, Marco Nolden, Steve Pieper)
#Tissue deformation estimation based on dense points cloud reconstruction using stereo images (Sara Moccia)
#Segmentation for improving image registration of preoperative MRI/intraoperative ultrasound images for neuro-navigation (Jennifer Nitsch, Scheherazade Kraß)
#CNN for pseudoCT generation from T1/T2 MRI (Giampaolo Pileggi, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea)
#Internationalizing Slicer modules (Juan Ruiz Alzola, )
#Interfacing Slicer to mobile phone-controlled sensors (Juan Ruiz Alzola, )
#Slicer and 3D Printing (Juan Ruiz Alzola, Mike Halle, )
#Slicer export to VR (Juan Ruiz Alzola, Mike Halle, )

=Registrants=

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this [http://www.imagenglab.com/newsite/project-week/ registration site].

# Kikinis, Ron :: Brigham and Women's Hospital, Harvard Medical School, USA
# Pieper, Steve :: Isomics, Inc., USA
# Kapur, Tina :: Brigham and Women's Hospital, Harvard Medical School, USA
# Spadea, Maria Francesca :: Magna Graecia University, Italy
# Zaffino, Paolo :: Magna Graecia University, Italy
# Scaramuzzino, Salvatore :: Magna Graecia University/ASL Vercelli, Italy
# Pileggi, Giampaolo :: Magna Graecia University, Italy/DKFZ, Germany
# Rackerseder, Julia :: Technische Universität München, Germany
# Pinter, Csaba :: Queen's University, Canada
# Kraß, Scheherazade :: University of Bremen, Germany
# Gerig, Guido :: NYU Tandon School of Engineering, USA
# Punzo, Davide :: Kapteyn Astronomical Institute, Netherlands
# Drouin, Simon :: NeuroImaging and Surgical Technologies (NIST) Lab, Canada
# Lasso, Andras :: School of Computing, Queen's University, Canada
# Favaro, Alberto :: Politecnico di Milano, Italy
# Leger, Etienne :: Concordia University, Canada
# Ziegler, Erik :: Ziegler Consult SAS
# Onken, Michael :: Open Connections GmbH, Germany
# Pinzi, Marlene :: Imperial College, UK
# Nitsch, Jennifer :: University Of Bremen, Germany
# Moccia, Sara :: Politecnico di Milano, Italy
# Black, David :: Fraunhofer Institute for Medical Image Computing MEVIS, Bremen, Germany
# Penzkofer, Tobias :: Charité Universitätsmedizin, Berlin, Germany
# Hansen, Christian :: Universität Magdeburg, Germany
# Vegard Solberg, Ole :: Norway
# Heinrich, Florian :: Universität Magdeburg, Germany
# Mewes, André :: Universität Magdeburg, Germany
# Hatscher, Benjamin :: Universität Magdeburg, Germany
# Hettig, Julian :: Universität Magdeburg, Germany
# Meyer, Anneke :: Universität Magdeburg, Germany
# Gulamhussene, Gino :: Universität Magdeburg, Germany