https://www.na-mic.org/w/api.php?action=feedcontributions&feedformat=atom&user=Weymouth 2026-06-03T02:13:21Z User contributions MediaWiki 1.33.0 https://www.na-mic.org/w/index.php?title=SDIWG:NCBC_Software_Classification_NCIBI_Examples&diff=8120 2007-03-06T18:22:34Z

<p>Weymouth: /* Edgewarp */</p> <hr /> <div>[[SDIWG:NCBC_Software_Classification|Back to the Main NCBC Software Ontology and Classification Page]]<br /> <br /> == NCIBI Software Classification &amp; Metadata Examples ==<br /> <br /> <br /> <br /> === MiMi:Michigan Molecular Interactions ===<br /> <br /> * NCBC [http://bioontology.org/ontologies/SoftwareOntology/ Ontology Classification]&lt;nowiki&gt;: Biotool --&gt; Data Management --&gt;Information retrieval, traversal and querying &lt;/nowiki&gt;<br /> * Description: MiMI gathers data from well-known protein interaction databases and merges the information. Since these datasets often contain contradictory information, the merge is performed in such a way that all information is retained. A provenance model has been developed that tracks where each piece of data came from, and what processes have been performed upon it. A simple yet powerful user interface aids users in their queries. Thus, MiMI allows scientists to query all data, whether corroborative, or contradictory, and specify which sources to utilize<br /> * Data Input: MQuery<br /> * Data Output: XML using MiMI's internal schema, PSI-MI format (version 2.5) and plain text<br /> * Implementation Language: Timber native XML database <br /> * Platforms tested: Web and Cytoscape Browsers<br /> * Authors: Magesh Jayapandian, Adriane Chapman, V. Glenn Tarcea, Cong Yu, Aaron Elkiss, Angela Ianni, Bin Liu, Arnab Nandi, Carlos Santos, Philip Andrews, Brian Athey, David States and H. V. Jagadish<br /> * URL: http://mimi.ncibi.org/MiMI/home.jsp<br /> * Keywords: data integration, protein interactions</div>

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