2008 Summer Project Week:PerkStation - Revision history

Sidd queens at 12:53, 27 June 2008

2008-06-27T12:53:23Z

2008-06-27T12:06:15Z

2008-06-27T12:05:14Z

2008-06-27T00:31:54Z

2008-06-27T00:31:02Z

2008-06-27T00:16:57Z

2008-06-27T00:15:53Z

2008-06-27T00:15:02Z

2008-06-23T18:20:41Z

Key Investigators

2008-06-18T15:58:33Z

@@ Line 36: / Line 36: @@
 ===During the project week, the following functionality has been accomplished and added:===
-- Actual volume transformation for image overlay system calibration i.e. Scale, Translate, Rotate the image to register it with patient/phantom through fiducial alignment
+- Actual volume transformation for image overlay system calibration i.e. Scale, Translate, Rotate the image, to register it with patient/phantom through fiducial alignment
 - Achieved above by two different methods: a) Moving the camera through vtkSliceLogic, vtkSliceNode; b) Integrating vtkMRMLLinearTransformNode and applying vtkTransform to volume (resuse of existing module)

@@ Line 33: / Line 33: @@
 <h1>Progress</h1>
 We are currently in the process of implementing the image overlay.
 ===During the project week, the following functionality has been accomplished and added:===
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 - Create an additional vtkRenderWindow to be sent to secondary monitor connected to PERK Station hardware; It involves creating a new instance of vtkRenderWindow, vtkActor, vtkImageMapper, however linking/sharing the image data to ensure consistency between SLICER SliceViewer window and render window on secondary monitor
 </div>

@@ Line 34: / Line 34: @@
 We are currently in the process of implementing the image overlay.
-Before arriving for the programming week, status:
+===Before arriving for the programming week, status:===
 - Complete work-flow GUI, and the module integrated in SLICER 3.3 as a loadable module
@@ Line 42: / Line 42: @@
 - 3D needle guide overlays on image in "Plan" step after specification of Entry, Target points and stays thereafter for "Insert", "Validate" steps
-During the project week, the following functionality has been accomplished and added:
+===During the project week, the following functionality has been accomplished and added:===
 - Actual volume transformation for image overlay system calibration i.e. Scale, Translate, Rotate the image to register it with patient/phantom through fiducial alignment

@@ Line 35: / Line 35: @@
 Before arriving for the programming week, status:
 - Complete work-flow GUI, and the module integrated in SLICER 3.3 as a loadable module
 - Capture and process mouse-clicks on image canvas (e.g. specification of entry, and target; fiducial clicks on image for calibration, etc)
 - 3D needle guide overlays on image in "Plan" step after specification of Entry, Target points and stays thereafter for "Insert", "Validate" steps
 During the project week, the following functionality has been accomplished and added:
 - Actual volume transformation for image overlay system calibration i.e. Scale, Translate, Rotate the image to register it with patient/phantom through fiducial alignment
 - Achieved above by two different methods: a) Moving the camera through vtkSliceLogic, vtkSliceNode; b) Integrating vtkMRMLLinearTransformNode and applying vtkTransform to volume (resuse of existing module)
 - Two way update and use of vtkMRMLLinearTransformNode, which adds to the MRML scene on loading PERK Station module
 - Create an additional vtkRenderWindow to be sent to secondary monitor connected to PERK Station hardware; It involves creating a new instance of vtkRenderWindow, vtkActor, vtkImageMapper, however linking/sharing the image data to ensure consistency between SLICER SliceViewer window and render window on secondary monitor
 </div>

@@ Line 32: / Line 32: @@
 <h1>Progress</h1>
-We are currently in the process of implementing the image overlay..
+We are currently in the process of implementing the image overlay.
 </div>

@@ Line 3: / Line 3: @@
 |[[Image:PerkStationNAMIC_TransformsNode.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
 |[[Image:PerkStationNAMIC_ActualTransform.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
 |[[Image:Plan.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
 |}

@@ Line 1: / Line 1: @@
 {|
 |[[Image:ProjectWeek-2008.png|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
-|[[Image:Calibrate.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
+|[[Image:PerkStationNAMIC_TransformsNode.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
 |[[Image:Plan.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
 |[[Image:Insert.JPG|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]

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 * Queen's University: Siddharth Vikal
 * Johns Hopkins University: Csaba Csoma
-* NA-MIC:
+* NA-MIC: Katie Hayes
 <div style="margin: 20px;">

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 <h1>Approach, Plan </h1>
-The PERK Station comprises of image overlay. The physician looks at the patient/phantom through the mirror showing the image overlay and the CT/MR image appears to be floating inside the body with the correct size and position, as if the physician had 2D ‘X-ray vision’. The planning and control software runs on a stand-alone laptop, where we draw a visual guide along the trajectory of insertion, mark the depth of insertion and push this image onto the overlay display.
+The PERK Station comprises of image overlay, laser overlay, and standard tracked freehand navigation in a single suite. The physician looks at the patient/phantom through the mirror showing the image overlay and the CT/MR image appears to be floating inside the body with the correct size and position, as if the physician had 2D ‘X-ray vision’. The planning and control software runs on a stand-alone laptop, where we draw a visual guide along the trajectory of insertion, mark the depth of insertion and push this image onto the overlay display.
 </div>
@@ Line 31: / Line 31: @@
 <h1>Progress</h1>
-We are currently in the process of ..
+We are currently in the process of implementing the image overlay..
 </div>