2009 Winter Project Week LungImagingPlatform - Revision history

Raul: /* Key Investigators */

2009-01-09T07:50:28Z

Key Investigators

Raul: /* Related projects */

2009-01-05T18:37:37Z

Related projects

Raul at 18:32, 5 January 2009

2009-01-05T18:32:10Z

Jcross186 at 19:33, 4 January 2009

2009-01-04T19:33:46Z

Raul at 03:32, 3 January 2009

2009-01-03T03:32:48Z

Raul: /* Related projects */

2009-01-03T03:32:15Z

Related projects

Raul at 03:31, 3 January 2009

2009-01-03T03:31:24Z

Raul: /* Key Investigators */

2009-01-03T03:20:32Z

Key Investigators

Raul: /* Key Investigators */

2008-12-19T18:19:18Z

Key Investigators

Raul: /* Key Investigators */

2008-12-19T18:16:35Z

Key Investigators

@@ Line 34: / Line 34: @@
 * A unique library that can be linked against and shared by other Slicer modules or external applications.
 * Command Line Modules that encapsulate the individual algorithmic components of the platform without strings attached to a particular solution. The idea is to enable rapid prototyping and deployment of the solutions before they are fully integrated.
-* Custom solutions for disease-oriented applications: our plan is to discuss how an explication can customize the Slicer 3 layout.
+* Custom solutions for disease-oriented applications: our plan is to discuss how an application can customize the Slicer 3 layout.
 We will focus on the following design aspects:
@@ Line 47: / Line 47: @@
 <h1>Progress</h1>
 * A semiautomatic lobe segmentation has been successfully implemented in Slicer 3 as a Command Line Module.
-* Initial design needs have been discussed.
+* Design needs have been discussed and integration with vmtk for tubular network representation is going to be adopted.
+* XNAT Desktop has been positively installed and tested as a platform to organize COPDGene datasets at BWH. Dicom rules have been defined to cover the needs of the project.
 </div>

@@ Line 59: / Line 59: @@
 === Related projects ===
 Other projects that share some common goals are:
-* [http://www.na-mic.org/Wiki/index.php/2009_Winter_Project_Week_SlicerLayouts |  User Interface Flexible Layouts]
+* [http://www.na-mic.org/Wiki/index.php/2009_Winter_Project_Week_SlicerLayouts | User Interface Flexible Layouts]
 * [http://www.na-mic.org/Wiki/index.php/2009_Winter_Project_Week_Slicer_VMTK | Vessel Segmentation in Slicer using VMTK ]
-* [http://wiki.na-mic.org/Wiki/index.php/2009_Winter_Project_Week:GT_TubularSurfaceSeg | ubular volumetric segmentation framework ]
+* [http://wiki.na-mic.org/Wiki/index.php/2009_Winter_Project_Week:GT_TubularSurfaceSeg | Tubular volumetric segmentation framework ]
 === References ===

@@ Line 2: / Line 2: @@
 |[[Image:NAMIC-SLC.jpg|thumb|320px|Return to [[2009_Winter_Project_Week|Project Week Main Page]] ]]
 |[[Image:sagittalLungLobes.jpg]]
-|[[]]
+|[[Image:AirwayInspectorGUI_small.png]]
 |}

@@ Line 1: / Line 1: @@
 {|
 |[[Image:NAMIC-SLC.jpg|thumb|320px|Return to [[2009_Winter_Project_Week|Project Week Main Page]] ]]
-|[[]]
+|[[Image:sagittalLungLobes.jpg]]
 |[[]]
 |}

← Older revision		Revision as of 03:32, 3 January 2009
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	* [http://wiki.na-mic.org/Wiki/index.php/2009_Winter_Project_Week:GT_TubularSurfaceSeg \| ubular volumetric segmentation framework ]		* [http://wiki.na-mic.org/Wiki/index.php/2009_Winter_Project_Week:GT_TubularSurfaceSeg \| ubular volumetric segmentation framework ]

−	===References==	+	=== References ===

← Older revision		Revision as of 03:31, 3 January 2009
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	</div>		</div>

−	===References===	+	=== Related projects ===
		+	Other projects that share some common goals are:
		+	* [[http://www.na-mic.org/Wiki/index.php/2009_Winter_Project_Week_SlicerLayouts \| User Interface Flexible Layouts]]
		+	* [[http://www.na-mic.org/Wiki/index.php/2009_Winter_Project_Week_Slicer_VMTK \| Vessel Segmentation in Slicer using VMTK ]]
		+	* [[http://wiki.na-mic.org/Wiki/index.php/2009_Winter_Project_Week:GT_TubularSurfaceSeg \| ubular volumetric segmentation framework ]]
		+
		+	===References==

@@ Line 19: / Line 19: @@
 <h1>Objective</h1>
-Our goal is to develop a lung imaging platform for the clinical understanding of multiple lung diseases like, Chronic Obstructive Pulmonary Disease (COPD), Asthma, Interstitial Lung Disease (ILD) among others. Quantitative lung imaging is a key component of on-going genetic and molecular biology studies that are being carried out at BWH and other centers across USA. A significant example of these new efforts is [[http://www.copdgene.org/|COPD Genetics Epidemiology]] multicenter study. The NAMIC Kit and Slicer 3 are ideal candidates for the implementation of such a effort.
+Our goal is to develop a lung imaging platform for the clinical understanding of multiple lung diseases such as Chronic Obstructive Pulmonary Disease (COPD), Asthma, and Interstitial Lung Disease (ILD) among others. Quantitative lung imaging is a key component of on-going genetic and molecular biology studies that are being carried out at BWH and other centers across USA. A significant example of these new efforts is [[http://www.copdgene.org/|COPD Genetics Epidemiology]] multicenter study. The NAMIC Kit and Slicer 3 are ideal candidates for the implementation of such efforts.
 Our goals for this week are threefold:
@@ Line 31: / Line 31: @@
 <h1>Approach, Plan</h1>
-Our approach is to develop a module in Slicer 3 that have the following components:
+Our approach is to develop a module in Slicer 3 that has the following components:
-* A unique library that can be link against and shared by other Slicer module or external applications.
+* A unique library that can be linked against and shared by other Slicer modules or external applications.
-* Command Line Modules that encapsulate the individual algorithm components of the platform without string attaches to a particular solution. The idea is to enable rapid prototyping and deployment of the solutions before they are fully integrated.
+* Command Line Modules that encapsulate the individual algorithmic components of the platform without strings attached to a particular solution. The idea is to enable rapid prototyping and deployment of the solutions before they are fully integrated.
 * Custom solutions for disease-oriented applications: our plan is to discuss how an explication can customize the Slicer 3 layout.

@@ Line 22: / Line 22: @@
 Our goals for this week are threefold:
-* User case analysis and design of the main platform components.
+* Design the main platform components.
 * Dynamic programming approaches for the extraction of 3D airways.
 * Porting our current imaging platform, [[http://www.airwayinspector.org| Airway Inspector]] based on 3D Slicer to Slicer 3.
@@ Line 31: / Line 31: @@
 <h1>Approach, Plan</h1>
 </div>