2010 Summer Project Week - Revision history

Marianna: /* IGT */

2017-06-30T13:05:07Z

IGT

Marianna at 13:02, 30 June 2017

2017-06-30T13:02:27Z

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Marianna at 15:52, 30 March 2017

2017-03-30T15:52:10Z

Marianna at 14:58, 30 March 2017

2017-03-30T14:58:45Z

Marianna at 23:01, 29 March 2017

2017-03-29T23:01:20Z

Marianna at 17:39, 9 December 2016

2016-12-09T17:39:15Z

Marianna at 15:16, 9 December 2016

2016-12-09T15:16:41Z

Marianna at 15:13, 9 December 2016

2016-12-09T15:13:36Z

Finetjul: /* Agenda */

2011-01-11T13:26:58Z

Agenda

Marianna: /* Attendee List */

2010-11-12T18:19:01Z

Attendee List

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@@ Line 56: / Line 56: @@
 === IGT ===
 #[[2010_Summer_Project_Week_MR_to_CT_Registration_for_Prostate_Brachytherapy_Dose_Calculation|MR to CT Registration for Prostate Brachytherapy Dose Calculation]] (Andriy Fedorov, Dominik Meier, Hans Johnson)
-#[[2010_Summer_Project_Week_Intraoperative Brain Shift Monitoring using Shear Mode Transcranial Ultrasound|Intraoprative Brain Shift Monitoring Using Shear Mode Transcranial Ultrasound]] (Jason White, Steve Pieper, Junichi Tokuda, Pratik Patel?)
+#[[2010_Summer_Project_Week_Intraoperative_Brain_Shift_Monitoring_Using_Shear_Mode_Transcranial_Ultrasound|Intraoprative Brain Shift Monitoring using Shear Mode Transcranial Ultrasound]] (Jason White, Steve Pieper, Junichi Tokuda, Pratik Patel?)
 #[[2010_Summer_Project_Week_Prostate_Intervention|Prostate Intervention(Junichi Tokuda,  Tamas Ungi, Haiying Liu, Sam Song)]]
 #[[2010_Summer_Project_Week_Liver_Ablation|Liver Ablation (Haiying Liu, Noby Hata)]]

@@ Line 1: / Line 1: @@
 __NOTOC__
 Back to [[Events]]
 [[image:PW-MIT2010.png|300px]]
@@ Line 9: / Line 7: @@
 ==Summary==
 The 11th PROJECT WEEK was held on June 21-25, 2010 in Boston, at MIT and Brigham and Women's Hospital. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. Participants traveled to the project week from 9 countries (Austria, Singapore, France, Germany, Japan, Italy, England, Poland, and Canada), and from 16 states within the US (MA, NY, NC, MD, CA, UT, OH, MO, GA, PA, CO, IA, FL, DC, CT, NM). The projects, agenda, and affiliations of attendees are detailed below.
 <gallery perrow="3" widths="200px">
@@ Line 227: / Line 227: @@
 We are pleased to announce the 11th PROJECT WEEK of hands-on research and development activity for applications in Image-Guided Therapy, Neuroscience, and several additional areas of biomedical research that enable personalized medicine. Participants will engage in open source programming using the [[NA-MIC-Kit|NA-MIC Kit]], algorithm design, medical imaging sequence development, tracking experiments, and clinical application. The main goal of this event is to move forward the translational research deliverables of the sponsoring centers and their collaborators. Active and potential collaborators are encouraged and welcome to attend this event. This event will be set up to maximize informal interaction between participants.
-Active preparation begins on Thursday, April 15th at 3pm ET, with a kick-off teleconference.  Invitations to this call will be sent to members of the sponsoring communities, their collaborators, past attendees of the event, as well as any parties who have expressed an interest in working with these centers. The main goal of the kick-off call is to get an idea of which groups/projects will be active at the upcoming event, and to ensure that there is sufficient coverage for all. Subsequent teleconferences will allow for more focused discussions on individual projects and allow the hosts to finalize the project teams, consolidate any common components, and identify topics that should be discussed in breakout sessions. In the final days leading upto the meeting, all project teams will be asked to fill in a template page on this wiki that describes the objectives and plan of their projects.
+Active preparation begins on Thursday, April 15th at 3pm ET, with a kick-off teleconference.  Invitations to this call will be sent to members of the sponsoring communities, their collaborators, past attendees of the event, as well as any parties who have expressed an interest in working with these centers. The main goal of the kick-off call is to get an idea of which groups/projects will be active at the upcoming event, and to ensure that there is sufficient coverage for all. Subsequent teleconferences will allow for more focused discussions on individual projects and allow the hosts to finalize the project teams, consolidate any common components, and identify topics that should be discussed in breakout sessions. In the final days leading up to the meeting, all project teams will be asked to fill in a template page on this wiki that describes the objectives and plan of their projects.
 The event itself will start off with a short presentation by each project team, driven using their previously created description, and will help all participants get acquainted with others who are doing similar work. In the rest of the week, about half the time will be spent in breakout discussions on topics of common interest of subsets of the attendees, and the other half will be spent in project teams, doing hands-on project work.  The hands-on activities will be done in 30-50 small teams of size 2-4, each with a mix of multi-disciplinary expertise.  To facilitate this work, a large room at MIT will be setup with several tables, with internet and power access, and each computer software development based team will gather on a table with their individual laptops, connect to the internet to download their software and data, and be able to work on their projects.  Teams working on projects that require the use of medical devices will proceed to Brigham and Women's Hospital and carry out their experiments there. On the last day of the event, a closing presentation session will be held in which each project team will present a summary of what they accomplished during the week.
 This event is part of the translational research efforts of [http://www.na-mic.org NA-MIC], [http://www.ncigt.org NCIGT], [http://nac.spl.harvard.edu/ NAC], [http://catalyst.harvard.edu/home.html Harvard Catalyst], and [http://www.cimit.org CIMIT].  It is an expansion of the NA-MIC Summer Project Week that has been held annually since 2005. It will be held every summer at MIT and Brigham and Women's Hospital in Boston, typically during the last full week of June, and in Salt Lake City in the winter, typically during the second week of January.
 == Logistics ==

@@ Line 2: / Line 2: @@
 Back to [[Events]]
-[[Engineering:Programming_Events|All Programming Events]]
+To [[Engineering:Programming_Events|All Hands on Project Events]]
 [[image:PW-MIT2010.png|300px]]
 =Welcome to the web page for the 11th Project Week!=
 ==Summary==
-The 11th PROJECT WEEK was held June 21-25, 2010 in Boston, at MIT and Brigham and Women's Hospital. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. Participants traveled to the project week from 9 countries (Austria, Singapore, France, Germany, Japan, Italy, England, Poland, and Canada), and from 16 states within the US (MA, NY, NC, MD, CA, UT, OH, MO, GA, PA, CO, IA, FL, DC, CT, NM). The projects, agenda, and affiliations of attendees are detailed below.
+The 11th PROJECT WEEK was held on June 21-25, 2010 in Boston, at MIT and Brigham and Women's Hospital. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. Participants traveled to the project week from 9 countries (Austria, Singapore, France, Germany, Japan, Italy, England, Poland, and Canada), and from 16 states within the US (MA, NY, NC, MD, CA, UT, OH, MO, GA, PA, CO, IA, FL, DC, CT, NM). The projects, agenda, and affiliations of attendees are detailed below.
 <gallery perrow="3" widths="200px">

@@ Line 1: / Line 1: @@
 __NOTOC__
 Back to [[Events]]
 [[image:PW-MIT2010.png|300px]]

@@ Line 7: / Line 7: @@
 ==Summary==
-The 11th PROJECT WEEK was held June 21-25, 2010 in Boston, at MIT and Brigham and Women's Hospital. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. Participants traveled to the project week from 9 countries (Austria, Singapore, France, Germany, Japan, Italy, England, Poland, and Canada), and from 16 states within the US(MA, NY, NC, MD, CA, UT, OH, MO, GA, PA, CO, IA, FL, DC, CT, NM). The projects, agenda, and affiliations of attendees are detailed below.
+The 11th PROJECT WEEK was held June 21-25, 2010 in Boston, at MIT and Brigham and Women's Hospital. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. Participants traveled to the project week from 9 countries (Austria, Singapore, France, Germany, Japan, Italy, England, Poland, and Canada), and from 16 states within the US (MA, NY, NC, MD, CA, UT, OH, MO, GA, PA, CO, IA, FL, DC, CT, NM). The projects, agenda, and affiliations of attendees are detailed below.
 <gallery perrow="3" widths="200px">
@@ Line 219: / Line 219: @@
 Please note:
 *We need to empty room by 1:30pm on Friday.  You are welcome to use wireless in Stata.
-*Please sign up for the developer [http://www.slicer.org/pages/Mailinglist mailing lists]
+*Please sign up for the Slicer Developer [http://www.slicer.org/pages/Mailinglist mailing lists]
 *Next Project Week [[AHM_2011| January 3-7, 2011, Salt Lake City, Utah]]
@@ Line 230: / Line 230: @@
 The event itself will start off with a short presentation by each project team, driven using their previously created description, and will help all participants get acquainted with others who are doing similar work. In the rest of the week, about half the time will be spent in breakout discussions on topics of common interest of subsets of the attendees, and the other half will be spent in project teams, doing hands-on project work.  The hands-on activities will be done in 30-50 small teams of size 2-4, each with a mix of multi-disciplinary expertise.  To facilitate this work, a large room at MIT will be setup with several tables, with internet and power access, and each computer software development based team will gather on a table with their individual laptops, connect to the internet to download their software and data, and be able to work on their projects.  Teams working on projects that require the use of medical devices will proceed to Brigham and Women's Hospital and carry out their experiments there. On the last day of the event, a closing presentation session will be held in which each project team will present a summary of what they accomplished during the week.
-This event is part of the translational research efforts of [http://www.na-mic.org NA-MIC], [http://www.ncigt.org NCIGT], [http://nac.spl.harvard.edu/ NAC], [http://catalyst.harvard.edu/home.html Harvard Catalyst], and [http://www.cimit.org CIMIT].  It is an expansion of the NA-MIC Summer Project Week that has been held annually since 2005. It will be held every summer at MIT and Brigham and Womens Hospital in Boston, typically during the last full week of June, and in Salt Lake City in the winter, typically during the second week of January.
+This event is part of the translational research efforts of [http://www.na-mic.org NA-MIC], [http://www.ncigt.org NCIGT], [http://nac.spl.harvard.edu/ NAC], [http://catalyst.harvard.edu/home.html Harvard Catalyst], and [http://www.cimit.org CIMIT].  It is an expansion of the NA-MIC Summer Project Week that has been held annually since 2005. It will be held every summer at MIT and Brigham and Women's Hospital in Boston, typically during the last full week of June, and in Salt Lake City in the winter, typically during the second week of January.
-A summary of all past NA-MIC Project Events is available [[Project_Events#Past|here]].
+A summary of all past NA-MIC Project Events is available [[Project_Events#Past_Project_Weeks|here]].
 == Logistics ==
@@ Line 271: / Line 271: @@
 #Yousef	Al-Kofahi,	CompuCyte Corporation
 #Peter	Anderson,	retired
-#Nicole	Aucoin,	Brigham & Women's Hospital
+#Nicole	Aucoin,	Brigham and Women's Hospitall
 #Michel	Audette,	Kitware, Inc.
-#Stephen	Aylward,	Kitware, Inc.
+#Stephen Aylward,	Kitware, Inc.
 #Jim Barabas, MIT
-#Barrett, Ryan, Brigham & Women's Hospital
+#Barrett Ryan, Brigham and Women's Hospital
 #Alexis	Boucharin,	UNC Neuro Image Research and Analysis Laboratories
-#Sylvain	Bouix, 	Brigham & Women's Hospital
+#Sylvain	Bouix, 	Brigham and Women's Hospital
 #Michael	Bowers,	Johns Hopkins University
 #Francois	Budin,	UNC
@@ Line 290: / Line 290: @@
 #Ilker	Ersoy,	University of Missouri Columbia
 #Andriy	Fedorov,	Surgical Planning Lab
-#Jean-Christophe	Fillion-Robin	,	Kitware, Inc.
+#Jean-Christophe	Fillion-Robin,	Kitware, Inc.
 #Julien	Finet,	Kitware, Inc.
 #James	Fishbaugh,	SCI Institute
@@ Line 304: / Line 304: @@
 #Adel	Hafiane,	ENSI-Bourges
 #Nathan	Hageman,
-#Dieter	Hahn,	University Erlangen
+#Dieter	Hahn,	University of Erlangen
-#Michael	Halle,	Surgical Planning Laboratory, Brigham & Women's Hospital
+#Michael	Halle,	Surgical Planning Laboratory, Brigham and Women's Hospital
 #Corentin	Hamel,	UNC Chapel Hill
 #Nobuhiko	Hata,	Brigham and Women's Hospital
@@ Line 313: / Line 313: @@
 #Leslie	Holton,	Medtronic Navigation
 #Luis	Ibanez,	Kitware, Inc.
-#Jayender	Jagadeesan,	Surgical Planning Laboratory, Brigham & Women's Hospital
+#Jayender	Jagadeesan,	Surgical Planning Laboratory, Brigham and Women's Hospital
 #Hans	Johnson,	University of Iowa
-#Tina	Kapur	,	Brigham and Women's Hospital
+#Tina	Kapur,	Brigham and Women's Hospital
 #Peter Karasev, Georgia Tech
 #Ron	Kikinis,	Brigham and Women's Hospital
@@ Line 329: / Line 329: @@
 #Yanling	Liu,	SAIC-Frederick, Inc.
 #Bradley	Lowekamp,	Lockheed Martin
-#raghu	machiraju,	The Ohio State University
+#Raghu	Machiraju,	The Ohio State University
 #Vincent	Magnotta,	The University of Iowa
-#mathieu	malaterre,	CoSMo Software
+#Mathieu	Malaterre,	CoSMo Software
-#Charles Maneval, Brigham & Women's Hospital
+#Charles Maneval, Brigham and Women's Hospital
 #Daniel	Marcus,	Washington University
-#William	Marks,	Focused Ultrasound Lab, Brigham & Women's Hospital, Harvard Medical School
+#William	Marks,	Focused Ultrasound Lab, Brigham and Women's Hospital
 #Katie	Mastrogiacomo,	Brigham and Women's Hospital
 #Joy	Matsui,	University of Iowa
 #Sean	Megason,	Harvard Medical School
-#Dominik	Meier, 	Brigham & Women's Hospital
+#Dominik Meier, 	Brigham and Women's Hospital
 #Bjoern	Menze,	CSAIL MIT
 #Mikhail	Milchenko,	WUSTL
@@ Line 344: / Line 344: @@
 #Kishore	Mosaliganti,	Harvard Medical School
 #Marc	Niethammer,	UNC Chapel Hill
-#Isaiah	Norton,	Brigham & Women's Hospital, Neurosurgery
+#Isaiah	Norton,	Brigham and Women's Hospital
-#Beck	Olson	,	UCSF
+#Beck	Olson,	UCSF
 #John	Onofrey,	Yale University
 #Raghav	Padmanabhan,	RPI
-#Kannappan	Palaniappan	,	University of Missouri
+#Kannappan	Palaniappan,	University of Missouri
-#Beatriz	Paniagua,	University of North Caolina at Chapel Hill
+#Beatriz	Paniagua,	University of North Carolina at Chapel Hill
 #Xenophon	Papademetris,	Yale University
-#Eun-Joo	Park,	Brigham & Women's Hospital
+#Eun-Joo	Park,	Brigham and Women's Hospital
 #David	Partyka,	Kitware, Inc.
 #Pratik	Patel,
@@ Line 357: / Line 357: @@
 #Thierry	PECOT,	Ohio State University
 #Marta	Peroni,	Politecnico di Milano
-#Antonin	Perrot-Audet	,	Harvard Medical School
+#Antonin	Perrot-Audet,	Harvard Medical School
 #Steve	Pieper,	Isomics, Inc.
 #Wendy	Plesniak,	Brigham and Women's Hospital
@@ Line 372: / Line 372: @@
 #Yundi	Shi,	UNC Chapel Hill
 #Nadya	Shusharina,	MGH
-#Shantanu	Singh	,	The Ohio State University
+#Shantanu	Singh,	The Ohio State University
-#Gareth	Smith	,	Wolfson Medical Imaging Centre (WMIC)
+#Gareth	Smith,	Wolfson Medical Imaging Centre (WMIC)
 #Lydie	Souhait,	Harvard Medical School
 #Dominik	Spinczyk,	Silesian University of Technology
 #Padmapriya	Srinivasan,
 #Xiaodong	Tao,	GE Research
-#Matthew	Toews	,	Brigham and Women's Hospital, Harvard Medical School
+#Matthew	Toews,	Brigham and Women's Hospital
 #Junichi	Tokuda,	Brigham and Women's Hospital
 #Tamas	Ungi,	Queen's University
@@ Line 389: / Line 389: @@
 #Adam	Weinrich,	Nokia
 #Sandy	Wells,	 Brigham and Women's Hospital
-#Phillip	White,	 Brigham and Women's Hospital, Harvard Medical School
+#Phillip	White,	 Brigham and Women's Hospital
 #Guorong	Wu,	University of North Carolina at Chapel Hill
 #Yin	Wu,	Mass General Hospital
 #Atsushi	Yamada,	Nagoya Institute of Technology
 #Alexander	Yarmarkovich,	ISOMICS
-#Alexander	Zaitsev,	Brigham and Womens Hospital
+#Alexander	Zaitsev,	Brigham and Women's Hospital

@@ Line 241: / Line 241: @@
 *'''Hotel:''' We have reserved a block of rooms  at the Boston Marriott Cambridge Hotel, Two Cambridge Center, 50 Broadway, Cambridge, MA 02142. (Phone: 617.252.4405, Fax: 617.494.6565)  [http://www.marriott.com/hotels/travel/BOSCB?groupCode=NAMNAMA&app=resvlink&fromDate=6/20/10&toDate=6/25/10   Please click here to reserve.] You will be directed to the property's home page with the group code already entered in the appropriate field. All you need to do is enter your arrival date to begin the reservation process.
-   ''' All reservations must be made by Tuesday, June 1, 2010 to receive the discounted rate of'''
+*''' All reservations must be made by Tuesday, June 1, 2010 to receive the discounted rate of'''
-   ''' $189/night/room (plus tax).'''
+*''' $189/night/room (plus tax).'''
-   ''' This rate is good only through June 1.'''
+*''' This rate is good only through June 1, 2010.'''
 Please note that if you try to reserve a room outside of the block on the shoulder nights via the link, you will be told that the group rate is not available for the duration of your stay. To reserve those rooms, which might not be at the group rate because it is based upon availability, please call Marriott Central Reservations at 1-800-228-9290.
@@ Line 281: / Line 281: @@
 #Francois	Budin,	UNC
 #Everette	Burdette,	Acoustic MedSystems, Inc.
-#Laurent	CHAUVIN,	Brigham and Women's Hospital
+#Laurent	Chauvin,	Brigham and Women's Hospital
 #Min	Chen,	Johns Hopkins University
 #Jason	Crane,	UCSF

@@ Line 1: / Line 1: @@
-Back to [[Project Events]], [[Events]]
+[[image:PW-MIT2010.png|300px]]
+==Summary==
 The 11th PROJECT WEEK was held June 21-25, 2010 in Boston, at MIT and Brigham and Women's Hospital. It recorded 126 registered attendees, who worked on 71 projects. These attendees represented 30 academic sites and 15 companies. Participants traveled to the project week from 9 countries (Austria, Singapore, France, Germany, Japan, Italy, England, Poland, and Canada), and from 16 states within the US(MA, NY, NC, MD, CA, UT, OH, MO, GA, PA, CO, IA, FL, DC, CT, NM). The projects, agenda, and affiliations of attendees are detailed below.
 <gallery perrow="3" widths="200px">
 Image:2010_Summer_Project_Week_Group.JPG|Volume Rendering Breakout Session
 Image:2010_Summer_Project_Week_Group_2.jpg|Raise Your Hand if you are a NRRD
@@ Line 14: / Line 15: @@
 Image:2010_Summer_Project_Week_Group_4.jpg| Brainlab VVlink OpenIGTLink Demo
 Image:2010_Summer_Project_Week_Group_5.jpg| Tutorial Contest Presentation
 </gallery>
 [http://www.smugmug.com/gallery/12687574_DsJjF '''More Photos ''']
 ==Projects==
 === Segmentation ===
 #[[2010_Summer_Project_Week_Robust_Statistics_Segmenter_Slicer_Module|Robust Statistics Segmenter Slicer Module]] (Yi Gao, Allen Tannenbaum, Ron Kikinis)

@@ Line 182: / Line 182: @@
 '''3:30-5:30pm: Tutorial:''' [[2010 Summer Project Week Breakout: Getting Started with Qt|Getting Started with Qt]] (Adam Weinrich, Nokia)
 <br>[[MIT_Project_Week_Rooms#32-155|32-155 (Stata Lecture Hall)]]
-|'''1-3pm: <font color="#4020ff">Breakout Session:'''</font><br> QT/Slicer (Steve, JC, J2)
+|'''1-3pm: <font color="#4020ff">Breakout Session:'''</font><br> [[2010_Summer_Project_Qt_tutorial|QT/Slicer]] (Steve, JC, J2)
 <br>[[MIT_Project_Week_Rooms#Grier_34-401_AB|Star Room]]
 <br>----------------------------------------<br>