2010 Summer Project Week SPECTRE - Revision history

Naucoin at 22:58, 24 June 2010

2010-06-24T22:58:27Z

2010-06-24T22:50:53Z

Key Investigators

2010-06-17T14:51:21Z

Expanded the objectives.

2010-06-16T15:04:07Z

Key Investigators

2010-06-15T15:15:37Z

Key Investigators

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 <gallery>
 Image:PW-MIT2010.png|[[2010_Summer_Project_Week#Projects|Projects List]]
+Image:SPECTREinVisStudio.jpg
 </gallery>
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 Setting the extension directory to the top level directory where we put the main CMakeLists.txt file and the SPECTRE.tcl.in file, Slicer3 discovers the module and loads it as a command line module.
-TODO: clean up the cmake files, set up the files we created as a separate cvs repository that we can check out as anon public. Write a find package cmake file for MIPAV.
+TODO:
 Once it's been copied to local disk, run cmake to configure and generate, and then build to check out the source code from nitrc and build it.

← Older revision		Revision as of 22:50, 24 June 2010
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	Tcl wrapped Java jar files have been integrated into Slicer3 already, so hopefully no major infrastructure changes will be required.		Tcl wrapped Java jar files have been integrated into Slicer3 already, so hopefully no major infrastructure changes will be required.

		+	Worked closely with Dave Partyka from Kitware to create CMakeLists.txt files so that the SPECTRE project can be built by:
		+	* checking out .java classes from various repositoires
		+	* compiling them into .class files
		+	* sorting out dependencies
		+	* extracting the .class files from the .jar files in the lib directories of the repository checkouts
		+	* generating a list of all the .class files and using that to create a jar file
		+	* created a SPECTRE.tcl.in file that we configure from CMake to set the MIPAV and SPECTRE_Slicer.jar paths
		+
		+	Setting the extension directory to the top level directory where we put the main CMakeLists.txt file and the SPECTRE.tcl.in file, Slicer3 discovers the module and loads it as a command line module.
		+
		+	TODO: clean up the cmake files, set up the files we created as a separate cvs repository that we can check out as anon public. Write a find package cmake file for MIPAV.
		+
		+	Once it's been copied to local disk, run cmake to configure and generate, and then build to check out the source code from nitrc and build it.

	</div>		</div>

← Older revision		Revision as of 15:04, 16 June 2010
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	<h3>Progress</h3>		<h3>Progress</h3>

−	Tcl wrapped Java jar files have been integrated into Slicer3 already, so hopefully no major ~~infrastructur~~ changes will be required.	+	Tcl wrapped Java jar files have been integrated into Slicer3 already, so hopefully no major infrastructure changes will be required.

← Older revision		Revision as of 15:15, 15 June 2010
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	Our plan for the project week is to first try out a temporary location for the jar file and tcl wrapper and then come up with a plan for updates.		Our plan for the project week is to first try out a temporary location for the jar file and tcl wrapper and then come up with a plan for updates.
		+
		+	SPECTRE outputs will be modified to be compatible with Slicer image types(i.e. intensity, mask, etc.)

	</div>		</div>

@@ Line 14: / Line 14: @@
 <h3>Objective</h3>
-Futher integration of the Java SPECTRE skull tripping module into Slicer3.
+Further integration of the Java SPECTRE skull stripping module into Slicer3.
@@ Line 33: / Line 36: @@
 SPECTRE outputs will be modified to be compatible with Slicer image types(i.e. intensity, mask, etc.)
 </div>
@@ Line 50: / Line 54: @@
 ==Delivery Mechanism==
-This work will be delivered to the NA-MIC Kit as a
+This work will be delivered to the NA-MIC Kit as a:
 #ITK Module
 #Slicer Module