https://www.na-mic.org/w/index.php?action=history&feed=atom&title=2010_Winter_Project_Week_Deformation_Field_Visualization
2010 Winter Project Week Deformation Field Visualization - Revision history
2026-06-06T01:35:16Z
Revision history for this page on the wiki
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Garrett: /* Key Investigators */
2010-01-08T15:46:38Z
<p><span dir="auto"><span class="autocomment">Key Investigators</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:46, 8 January 2010</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Progress</h3></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Progress</h3></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> </div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">* Produced ITK filter to create deformation tensor image from deformation field</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">* Produced ITK filter to create log-Euclidean geodesic anisotropy image from deformation tensor image</ins></div></td></tr>
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Garrett
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Garrett: /* References */
2009-12-17T15:05:52Z
<p><span dir="auto"><span class="autocomment">References</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:05, 17 December 2009</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Lepore et al. Generalized tensor-based morphometry of HIV/AIDS using multivariate statistics on deformation tensors. IEEE Transactions on Medical Imaging (2008) vol. 27 (1) pp. 129-41</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Lepore et al. Generalized tensor-based morphometry of HIV/AIDS using multivariate statistics on deformation tensors. IEEE Transactions on Medical Imaging (2008) vol. 27 (1) pp. 129-41</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Lepore et al. Mean template for tensor-based morphometry using deformation tensors. Medical image computing and computer-assisted intervention : MICCAI International Conference on Medical Image Computing and Computer-Assisted Intervention (2007) vol. 10 (Pt 2) pp. 826-33</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Lepore et al. Mean template for tensor-based morphometry using deformation tensors. Medical image computing and computer-assisted intervention : MICCAI International Conference on Medical Image Computing and Computer-Assisted Intervention (2007) vol. 10 (Pt 2) pp. 826-33</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*Vincent Arsigny, Olivier Commowick, Xavier Pennec, and Nicholas Ayache. A Log-Euclidean Framework for Statistics on Diffeomorphisms. In Proc. of the 9th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'06), LNCS, 2-4 October 2006.</ins></div></td></tr>
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Garrett
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Garrett: /* Key Investigators */
2009-12-17T15:02:21Z
<p><span dir="auto"><span class="autocomment">Key Investigators</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:02, 17 December 2009</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* UNC-Chapel Hill: Garrett Larson, Martin Styner, Ipek Oguz</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* UNC-Chapel Hill: Garrett Larson, Martin Styner, Ipek Oguz</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">* Core 2 support: TBD at project week, Luis Ibanez</ins></div></td></tr>
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Garrett
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_Deformation_Field_Visualization&diff=46406&oldid=prev
Garrett: /* Key Investigators */
2009-12-17T15:01:31Z
<p><span dir="auto"><span class="autocomment">Key Investigators</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:01, 17 December 2009</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Approach, Plan</h3></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Approach, Plan</h3></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Develop Log Euclidean filter</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Develop Log Euclidean <ins class="diffchange diffchange-inline">deformation field </ins>filter</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* <del class="diffchange diffchange-inline">Adapt filter </del>for use in Slicer</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* <ins class="diffchange diffchange-inline">Develop external module </ins>for use in Slicer <ins class="diffchange diffchange-inline">computing deformation tensor field and its logEuclidean map</ins></div></td></tr>
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Garrett
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_Deformation_Field_Visualization&diff=46405&oldid=prev
Garrett: /* Key Investigators */
2009-12-17T14:59:50Z
<p><span dir="auto"><span class="autocomment">Key Investigators</span></span></p>
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 14:59, 17 December 2009</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* UNC-Chapel Hill: Garrett Larson</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* UNC-Chapel Hill: Garrett Larson<ins class="diffchange diffchange-inline">, Martin Styner, Ipek Oguz</ins></div></td></tr>
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Garrett
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_Deformation_Field_Visualization&diff=46404&oldid=prev
Garrett: /* Key Investigators */
2009-12-17T14:59:32Z
<p><span dir="auto"><span class="autocomment">Key Investigators</span></span></p>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Objective</h3></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Objective</h3></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>I am developing tools to measure and visualize <del class="diffchange diffchange-inline">diffusion </del>tensors <del class="diffchange diffchange-inline">in </del>rodent brains. The goal is to produce a Log Euclidean map ITK filter and Slicer plugin for open source distribution.</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>I am developing tools to measure and visualize <ins class="diffchange diffchange-inline">deformation fields and </ins>tensors <ins class="diffchange diffchange-inline">(with application to </ins>rodent brains<ins class="diffchange diffchange-inline">)</ins>. The goal is to produce a Log Euclidean map ITK filter and Slicer plugin for open source distribution.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div></div></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div></div></div></td></tr>
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Garrett
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_Deformation_Field_Visualization&diff=46401&oldid=prev
Garrett: moved 2010 Winter Project Week Diffusion Tensor Visualization to 2010 Winter Project Week Deformation Field Visualization
2009-12-17T14:58:00Z
<p>moved <a href="/wiki/2010_Winter_Project_Week_Diffusion_Tensor_Visualization" class="mw-redirect" title="2010 Winter Project Week Diffusion Tensor Visualization">2010 Winter Project Week Diffusion Tensor Visualization</a> to <a href="/wiki/2010_Winter_Project_Week_Deformation_Field_Visualization" title="2010 Winter Project Week Deformation Field Visualization">2010 Winter Project Week Deformation Field Visualization</a></p>
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<td colspan="1" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="1" style="background-color: #fff; color: #222; text-align: center;">Revision as of 14:58, 17 December 2009</td>
</tr><tr><td colspan="2" class="diff-notice" lang="en"><div class="mw-diff-empty">(No difference)</div>
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Garrett
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_Deformation_Field_Visualization&diff=46398&oldid=prev
Garrett: created stub for diffusion tensor visualization
2009-12-17T10:45:58Z
<p>created stub for diffusion tensor visualization</p>
<p><b>New page</b></p><div>__NOTOC__<br />
<gallery><br />
Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]<br />
</gallery><br />
<br />
==Key Investigators==<br />
* UNC-Chapel Hill: Garrett Larson<br />
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<div style="margin: 20px;"><br />
<div style="width: 27%; float: left; padding-right: 3%;"><br />
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<h3>Objective</h3><br />
I am developing tools to measure and visualize diffusion tensors in rodent brains. The goal is to produce a Log Euclidean map ITK filter and Slicer plugin for open source distribution.<br />
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</div><br />
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<div style="width: 27%; float: left; padding-right: 3%;"><br />
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<h3>Approach, Plan</h3><br />
* Develop Log Euclidean filter<br />
* Adapt filter for use in Slicer<br />
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</div><br />
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<div style="width: 40%; float: left;"><br />
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<h3>Progress</h3><br />
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</div><br />
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</div><br />
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<div style="width: 97%; float: left;"><br />
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==References==<br />
*Lepore et al. Generalized tensor-based morphometry of HIV/AIDS using multivariate statistics on deformation tensors. IEEE Transactions on Medical Imaging (2008) vol. 27 (1) pp. 129-41<br />
*Lepore et al. Mean template for tensor-based morphometry using deformation tensors. Medical image computing and computer-assisted intervention : MICCAI International Conference on Medical Image Computing and Computer-Assisted Intervention (2007) vol. 10 (Pt 2) pp. 826-33<br />
</div></div>
Garrett