2010 Winter Project Week HARDI CONNECTIVITY - Revision history

Wendyuu at 17:40, 8 January 2010

2010-01-08T17:40:54Z

2010-01-08T17:14:28Z

Key Investigators

2010-01-08T17:13:50Z

Key Investigators

2010-01-08T15:03:59Z

Key Investigators

2010-01-08T15:02:55Z

2010-01-07T19:47:00Z

Key Investigators

2010-01-07T19:46:17Z

Key Investigators

2010-01-05T16:27:01Z

Key Investigators

2010-01-05T15:30:40Z

Key Investigators

2010-01-05T15:29:14Z

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 <gallery>
 Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]
 </gallery>

← Older revision		Revision as of 17:14, 8 January 2010
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	==Key Investigators==		==Key Investigators==
−	* UNC-Chapel Hill: Yundi(Wendy) Shi~~, Deepika Mahalingam~~, Martin Styner	+	* UNC-Chapel Hill: Deepika Mahalingam, Yundi(Wendy) Shi, Martin Styner

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 *Day 2 - Trying to build the slicer3 module and use it to load the reconstructed ODF volume and use the binary odf calculation for the primate data. (The data format is in nifti)  Meeting with [[ 2010_Winter_Project_Week_Tractography|James Malcolm]] for the possibility of using their fiber tracking technique on our data.
-*Day 3 - Working with [[2010_Winter_Project_Week_HARDI_RSH  | Luke]] for using nrrd files using python in Slicer3 for his implementation.
+*Day 3 - Apply the ODF calculation implemented by [[2010_Winter_Project_Week_HARDI_RSH  | Luke]] to the 1 year old human dataset.
-*Day 4 - Learning usage of camino commands to fit multiple tensors to our 1 year old human data and running PASMRI on the same data.
+*Day 4 - Learning usage of camino commands to fit multiple tensors to our 1 year old human data and running PASMRI on the same data.  Visualize ODF files (nrrd format) in Slicer3 using the module by [[2010_Winter_Project_Week_HARDI_RSH  | Luke]]
 </div>

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 *Day 3 - Working with [[2010_Winter_Project_Week_HARDI_RSH  | Luke]] for using nrrd files using python in Slicer3 for his implementation.
-*Day 4 - Learning usage of camino commands to fit single and multiple tensors to our 1 year old human data and running PASMRI on the same data.
+*Day 4 - Learning usage of camino commands to fit multiple tensors to our 1 year old human data and running PASMRI on the same data.
 </div>

← Older revision		Revision as of 15:02, 8 January 2010
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	*Day 3 - Working with [[2010_Winter_Project_Week_HARDI_RSH \| Luke]] for using nrrd files using python in Slicer3 for his implementation.		*Day 3 - Working with [[2010_Winter_Project_Week_HARDI_RSH \| Luke]] for using nrrd files using python in Slicer3 for his implementation.
		+
		+	*Day 4 - Learning usage of camino commands to fit single and multiple tensors to our 1 year old human data and running PASMRI on the same data.

	</div>		</div>

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 *Day 1 - Compile and build HardiRsh([[2010_Winter_Project_Week_HARDI_RSH  | Bloy/Verma/Westin]]) with EXECT_OPTION (for ODF calculation) and SLICER_OPTION (for visualization in Slicer3) on a mac os platform
-*Day 2 - Trying to build the slicer3 module and use it to load the reconstructed ODF volume and use the binary odf calculation for the primate data. (The data format is in nifti)  Meeting with [[ 2010_Winter_Project_Week_Tractography|Filtered tractography | James Malcolm]] for the possibility of using their fiber tracking technique on our data.
+*Day 2 - Trying to build the slicer3 module and use it to load the reconstructed ODF volume and use the binary odf calculation for the primate data. (The data format is in nifti)  Meeting with [[ 2010_Winter_Project_Week_Tractography|James Malcolm]] for the possibility of using their fiber tracking technique on our data.
 *Day 3 - Working with [[2010_Winter_Project_Week_HARDI_RSH  | Luke]] for using nrrd files using python in Slicer3 for his implementation.

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 We have the matlab implementation of various QBall techniques and have applied those techniques to neonatal human data and primate data.  We're also learning to use the CAMINO package and its use for our purpose. We just started the development for the global fiber tractography.
-*Day 1 - Compile and build HardiRsh([[2010_Winter_Project_Week_HARDI_RSH  | Bloy/Verma/Westin]]) with EXECT_OPTION and SLICER_OPTION on a mac os platform
+*Day 1 - Compile and build HardiRsh([[2010_Winter_Project_Week_HARDI_RSH  | Bloy/Verma/Westin]]) with EXECT_OPTION (for ODF calculation) and SLICER_OPTION (for visualization in Slicer3) on a mac os platform
 *Day 2