https://www.na-mic.org/w/index.php?action=history&feed=atom&title=2010_Winter_Project_Week_TubularTreeSeg
2010 Winter Project Week TubularTreeSeg - Revision history
2026-05-15T18:25:38Z
Revision history for this page on the wiki
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https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=47582&oldid=prev
Vandymohan at 16:34, 8 January 2010
2010-01-08T16:34:24Z
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Vandana Mohan (Georgia Tech)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Vandana Mohan<ins class="diffchange diffchange-inline">, Allen Tannenbaum </ins>(Georgia Tech)</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Marek Kubicki (BWH)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Marek Kubicki (BWH)</div></td></tr>
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Vandymohan
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=47568&oldid=prev
Vandymohan at 16:18, 8 January 2010
2010-01-08T16:18:11Z
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Image:MohanGT-TubSegSlicerModule-IntegrationResult1.png|<del class="diffchange diffchange-inline">CB Segmentation result from </del>Tubular Surface Segmentation framework <del class="diffchange diffchange-inline">(integrated into </del>Slicer<del class="diffchange diffchange-inline">)</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Image:MohanGT-TubSegSlicerModule-IntegrationResult1.png|<ins class="diffchange diffchange-inline">Snapshot of </ins>Tubular Surface Segmentation framework <ins class="diffchange diffchange-inline">as a </ins>Slicer <ins class="diffchange diffchange-inline">module, and obtained result</ins></div></td></tr>
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Vandymohan
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=47555&oldid=prev
Vandymohan: /* Key Investigators */
2010-01-08T16:02:47Z
<p><span dir="auto"><span class="autocomment">Key Investigators</span></span></p>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Progress</h3></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h3>Progress</h3></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>The algorithm is available in MATLAB with parts of the framework as C code (via mex). </div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">* </ins>The algorithm is available in MATLAB with parts of the framework as C code (via mex)<ins class="diffchange diffchange-inline">. </ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">* During winter project week 2010: Framework integrated into Slicer as MATLAB module. Tested for CB segmentation. (See above image for snapshot of module view and result from Slicer.)</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">* Next steps: Enable branching detection in framework, and test on vessel segmentation</ins>.</div></td></tr>
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Vandymohan
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=47520&oldid=prev
Vandymohan at 07:27, 8 January 2010
2010-01-08T07:27:00Z
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">Image:MohanGT-TubSegSlicerModule-IntegrationResult1.png|CB Segmentation result from Tubular Surface Segmentation framework (integrated into Slicer)</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div></gallery></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div></gallery></div></td></tr>
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Vandymohan
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=45742&oldid=prev
Vandymohan: /* References */
2009-12-04T18:03:20Z
<p><span dir="auto"><span class="autocomment">References</span></span></p>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Tubular Surface Segmentation for extracting anatomical structures from medical imagery; Vandana Mohan, Ganesh Sundaramoorthi and Allen Tannenbaum; IEEE Transactions in Medical Imaging (in review)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">"</ins>Tubular Surface Segmentation for extracting anatomical structures from medical imagery<ins class="diffchange diffchange-inline">"</ins>; Vandana Mohan, Ganesh Sundaramoorthi and Allen Tannenbaum; IEEE Transactions in Medical Imaging (in review)</div></td></tr>
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Vandymohan
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=45741&oldid=prev
Vandymohan at 18:02, 4 December 2009
2009-12-04T18:02:52Z
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Key Investigators==</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* <del class="diffchange diffchange-inline">Andras Lasso </del>(<del class="diffchange diffchange-inline">Queen's University</del>)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* <ins class="diffchange diffchange-inline">Vandana Mohan </ins>(<ins class="diffchange diffchange-inline">Georgia Tech</ins>)</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* <del class="diffchange diffchange-inline">Yi Gao </del>(<del class="diffchange diffchange-inline">Georgia Tech</del>)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* <ins class="diffchange diffchange-inline">Marek Kubicki </ins>(<ins class="diffchange diffchange-inline">BWH</ins>)</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><div style="margin: 20px;"></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><div style="margin: 20px;"></div></td></tr>
</table>
Vandymohan
https://www.na-mic.org/w/index.php?title=2010_Winter_Project_Week_TubularTreeSeg&diff=45740&oldid=prev
Vandymohan: Created page with '__NOTOC__ <gallery> Image:PW-SLC2010.png|Projects List </gallery> ==Key Investigators== * Andras Lasso (Queen's University) * Yi Gao (Geor…'
2009-12-04T18:02:20Z
<p>Created page with '__NOTOC__ <gallery> Image:PW-SLC2010.png|<a href="/wiki/2010_Winter_Project_Week#Projects" title="2010 Winter Project Week">Projects List</a> </gallery> ==Key Investigators== * Andras Lasso (Queen's University) * Yi Gao (Geor…'</p>
<p><b>New page</b></p><div>__NOTOC__<br />
<gallery><br />
Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]<br />
</gallery><br />
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<br />
==Key Investigators==<br />
* Andras Lasso (Queen's University)<br />
* Yi Gao (Georgia Tech)<br />
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<div style="margin: 20px;"><br />
<div style="width: 27%; float: left; padding-right: 3%;"><br />
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<h3>Objective</h3><br />
Implement a Slicer module for the Tubular Tree segmentation framework of Mohan et al.<br />
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</div><br />
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<div style="width: 27%; float: left; padding-right: 3%;"><br />
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<h3>Approach, Plan</h3><br />
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Implement as a command-line module via integration of current MATLAB implementation.<br />
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</div><br />
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<div style="width: 40%; float: left;"><br />
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<h3>Progress</h3><br />
The algorithm is available in MATLAB with parts of the framework as C code (via mex). <br />
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</div><br />
</div><br />
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<div style="width: 97%; float: left;"><br />
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==References==<br />
Tubular Surface Segmentation for extracting anatomical structures from medical imagery; Vandana Mohan, Ganesh Sundaramoorthi and Allen Tannenbaum; IEEE Transactions in Medical Imaging (in review)<br />
</div></div>
Vandymohan