2011-Challenge:Segment-a-spine - Revision history

Grundlett: Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

2017-07-10T17:34:41Z

Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

2011-07-13T14:27:23Z

2011-07-13T14:25:08Z

2011-07-12T22:31:44Z

2011-03-20T14:54:49Z

2011-02-25T20:01:37Z

Deliverables

2011-01-15T17:59:43Z

Deliverables

2011-01-15T17:58:21Z

Sample data set

2011-01-15T17:53:56Z

Deliverables

2011-01-14T17:48:45Z

Deliverables

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 *the algorithm will be tested using a different ct data set of comparable quality.
 *The algorithm can be semi-automated. It is acceptable to ask the user to point to one or more vertebrae or other structures.
-*The algorithm must comply with [http://www.slicer.org/slicerWiki/index.php/Documentation-Rons-Rules-For-Tools "Rons Rules For Tools"].
+*The algorithm must comply with [https://www.slicer.org/wiki/Documentation-Rons-Rules-For-Tools "Rons Rules For Tools"].
 =Deliverables=

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 *[[media:2009-03-03-722LungCT-4.nrrd|Lung CT data set]]: This is a data set from a different subject.
 *[[media:COPDCases.zip|Lung CT data sets (3 cases) with COPD]]: These are three subjects with different degree of COPD.
 =Atlas reference=
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 [[image:RadnosticsSpineSegmentationSample.jpg|right|300px|Radnostics Spine Segmentation]]
 =Winning Project=

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 [[image:2010AbdominalAtlasBones.png|right|350px|Individual vertebrae have been manually segmented in the abdominal atlas]]
 =Atlas reference=
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 *http://en.wikipedia.org/wiki/Lumbar_vertebrae
 *http://en.wikipedia.org/wiki/Sacrum
 =Winning Project=
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 [http://wiki.na-mic.org/Wiki/index.php/2011_Summer_Project_Week_Spine_Segmentation_And_Osteoporosis_Screening_CT Radnostics Spine Segmentation And Osteoporosis Screening in CT] by
-[http://radnostics.com/default.aspx Radnostics]: [mailto:Anthony.Blumfield@Radnostics.com Anthony Blumfield]
+*[http://radnostics.com/default.aspx Radnostics]: [mailto:Anthony.Blumfield@Radnostics.com Anthony Blumfield]
+*[http://www.einstein.yu.edu/home/default.asp Albert Einstein College of Medicine]: [http://www.einstein.yu.edu/home/faculty/profile.asp?id=10350 Einat Blumfield, MD]

← Older revision		Revision as of 22:31, 12 July 2011
Line 45:		Line 45:
	*http://en.wikipedia.org/wiki/Lumbar_vertebrae		*http://en.wikipedia.org/wiki/Lumbar_vertebrae
	*http://en.wikipedia.org/wiki/Sacrum		*http://en.wikipedia.org/wiki/Sacrum
		+
		+	=Winning Project=
		+	The winning project of the 2011 segment-a-spine-challenge is
		+
		+	[http://wiki.na-mic.org/Wiki/index.php/2011_Summer_Project_Week_Spine_Segmentation_And_Osteoporosis_Screening_CT Radnostics Spine Segmentation And Osteoporosis Screening in CT] by
		+
		+	[http://radnostics.com/default.aspx Radnostics]: [mailto:Anthony.Blumfield@Radnostics.com Anthony Blumfield]
		+
		+	[http://www.einstein.yu.edu/home/default.asp Albert Einstein College of Medicine]: [http://www.einstein.yu.edu/home/faculty/profile.asp?id=10350 Einat Blumfield, MD]
		+
		+	.

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 *The best solution will be awarded a prize of USD 500.-
 *Definition of "best":
-**Compliant with Rons Rules for Tools
+**Compliant with Rons Rules for Tools. Slicer license strongly preferred.
 **Outer boundaries of the vertebral body correspond to the visible boundaries
 **Clean separation from adjacent vertebrae, ribs (if present) and intervertebral disks
-**Full segmentation of the transverse, spinous, and other processes
+**Full segmentation of the transverse, spinous, and other processes.
-** 2-3 vertebrae will be segmented by Ron using your tool on Rons CT data set(s).
+** 2-3 vertebrae will be segmented by Ron on his laptop using your tool on Rons CT data sets. The data sets will be of a quality comparable to the test data sets.
-** During the test phase thoracic or lumbar vertebrae will be used. The cervical will not be used
+** During the test phase thoracic or lumbar vertebrae will be used. The cervical vertebrae will not be used.
 =Sample data set=

← Older revision	Revision as of 14:54, 20 March 2011
(No difference)

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 =Sample data set=
-*[[Media:CT crop.zip|See volume of interest]] which is cropped from the full data set. For reference, L1 has been labeled. Use File/Load scene to load the volume into Slicer. The size of the download is 70MB and contains the original data set as well.
+*[[Media:CT crop.zip|See example of a volume of interest]] which is cropped from the full data set. For reference, L1 has been labeled. Use File/Load scene to load the volume into Slicer. The size of the download is 70MB and contains the original data set as well.
 **The bottom case in [[RSNA2010.PlanningLog#Demos_for_the_Slicer_booth|this table]] is the original location.
 *[[media:2009-03-03-722LungCT-4.nrrd|Lung CT data set]]: This is a data set from a different subject.

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 =Deliverables=
 *Deliver your solution to Ron (contact by email) by May 31 2011
-**Plug-in for Slicer
+**Plug-in for Slicer using the Slicer license
 **Directions on how to use
@@ Line 24: / Line 24: @@
 **Clean separation from adjacent vertebrae, ribs (if present) and intervertebral disks
 **Full segmentation of the transverse, spinous, and other processes
 =Sample data set=