2011 Winter Project Week:RegistrationCaseLibrary - Revision history

Meier: /* Key Investigators */

2011-01-14T14:47:28Z

Key Investigators

Meier: /* Key Investigators */

2011-01-12T17:00:20Z

Key Investigators

Meier at 00:59, 12 January 2011

2011-01-12T00:59:34Z

Meier: /* Progress: Target Projects */

2011-01-12T00:58:16Z

Progress: Target Projects

Meier: /* Key Investigators */

2010-12-16T21:40:00Z

Key Investigators

Meier at 20:30, 17 November 2010

2010-11-17T20:30:11Z

Meier at 20:29, 17 November 2010

2010-11-17T20:29:32Z

Meier at 20:28, 17 November 2010

2010-11-17T20:28:22Z

Meier: Created page with 'NOTOC Registration Case Library =The 3DSlicer Registration Case Library Project= ==Key Investigators== * BWH: Dominik Meier, Ron Kikin…'

2010-11-17T20:26:05Z

Created page with '__NOTOC__ 400px|Registration Case Library =The 3DSlicer Registration Case Library Project= ==Key Investigators== * BWH: Dominik Meier, Ron Kikin…'

New page

__NOTOC__
[[Image:RegLib_Banner1.png‎|400px|Registration Case Library]]
=The 3DSlicer Registration Case Library Project=

==Key Investigators==
* BWH: Dominik Meier, Ron Kikinis

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
This work is part of a 2-year effort to supplement the 3DSlicer Registration Module with extensive set of documentation, tutorials and use case scenarios. We seek to build a comprehensive '''[[Projects:RegistrationDocumentation:UseCaseInventory|library of use cases ]]''' for every form of registration challenge using 3DSlicer. Each library entry will contain a dataset along with Registration Parameter Presets and a guided tutorial on how to successfully register the images.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>

The use case library relies mainly on user contributions for content. There is an [[Projects:RegistrationDocumentation:UseCaseAdvertisement|'''official call for datasets''']] to all slicer users to consider a unique time-limited service for any dataset/registration problem that is not yet in the library. Users who agree to share one '''anonymized''' dataset for the library will have that dataset registered by us and the solution and strategies posted. [[Projects:RegistrationDocumentation:UseCaseExample1b|Look here for an example of a library entry.]]
<br>
Our plan for the project week is to first get a survey of all projects using registration. We hope to catch most of these projects from reviewing these project description pages, so it is important that if you use registration in your procedure, please make sure to mention explicitly. We will collect as many example cases as possible, and select a few focus cases with particularly vexing registration challenges and begin to develop the appropriate tailored registration strategies.
<br>

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
*see below for list of projects/contacts for new use cases: [[2011_Winter_Project_Week_RegistrationCaseLibrary#Target Projects]]
</div>
</div>

<div style="width: 97%; float: left;">
=== Progress: Target Projects ===
The following projects below have been tentatively identified as having strong registration ties. We will seek discussion with these projects during the week. If your project is listed here, I will try to discuss the registration aspects at some point during the week. Type and length of discussion will vary greatly. Text next to each project below identifies the registration link.

project links go here

=== Progress: Notes ===

==References==
*[[2011_Winter_Project_Week#Projects|back to AHM_2011 project list]]
*[[Projects:RegistrationDocumentation|Link to the RegistrationDocumentation Project Wiki]]
*[[Projects:RegistrationDocumentation:RegLibTable|Link to Registration Case Library]]

</div>

@@ Line 32: / Line 32: @@
 <h3>Progress</h3>
 * use of ITK registration cost function to validate FE-based model of intraoperative brainshift -> expose ITK cost function: develop a user module to measure/visualize MI over a specified region
 * atlas-based registration/classification (prodcedure for translating physical alignment to image-space congruence)
 </div>

@@ Line 32: / Line 32: @@
 <h3>Progress</h3>
 * use of ITK registration cost function to validate FE-based model of intraoperative brainshift -> expose ITK cost function: develop a user module to measure/visualize MI over a specified region
 </div>
 </div>

@@ Line 1: / Line 1: @@
 __NOTOC__
-[[Image:RegLib_Banner1.png‎|400px|Registration Case Library]]
+[[Image:RegLib_Banner1.png‎|300px|Registration Case Library]]
-[[Image:RegLib_CaseTable_snapshot.png‎|400px|Registration Case Library Table]]
+____ [[Image:RegLib_CaseTable_snapshot.png‎|200px|Registration Case Library Table]]
 =The 3DSlicer Registration Case Library Project=

@@ Line 31: / Line 31: @@
 <h3>Progress</h3>
-*see below for list of projects/contacts for new use cases: [[2011_Winter_Project_Week:RegistrationCaseLibrary#Target Projects]]
+* use of ITK registration cost function to validate FE-based model of intraoperative brainshift -> expose ITK cost function: develop a user module to measure/visualize MI over a specified region
 </div>
 </div>
 <div style="width: 97%; float: left;">
 === Progress: Notes ===

@@ Line 36: / Line 36: @@
 <div style="width: 97%; float: left;">
-=== Progress: Target Projects ===
+=== Progress: Target Projects & use cases ===
-The following projects below have been tentatively identified as having strong registration ties. We will seek discussion with these projects during the week. If your project is listed here, I will try to discuss the registration aspects at some point during the week.  Type and length of discussion will vary greatly. Text next to each project below identifies the registration link.
+* use of ITK registration cost function to validate FE-based model of intraoperative brainshift -> expose ITK cost function: develop a user module to measure/visualize MI over a specified region
 === Progress: Notes ===

@@ Line 21: / Line 21: @@
 <h3>Approach, Plan</h3>
-The use case library relies mainly on user contributions for content. There is an [[Projects:RegistrationDocumentation:UseCaseAdvertisement|'''official call for datasets''']]  to all slicer users to consider a unique time-limited service for any dataset/registration problem that is not yet in the library. Users who agree to share one '''anonymized''' dataset for the library will have that dataset registered by us and the solution and strategies posted.  [[Projects:RegistrationDocumentation:UseCaseExample1b|Look here for an example of a library entry.]]
+The ''Slicer Registration Library'' relies mainly on user contributions for content. There is an [[Projects:RegistrationDocumentation:UseCaseAdvertisement|'''official call for datasets''']]  to all slicer users to consider a unique time-limited service for any dataset/registration problem that is not yet in the library. Users who agree to share one '''anonymized''' dataset for the library will have that dataset registered by us and the solution and strategies posted.  [[Projects:RegistrationDocumentation:UseCaseExample1b|Look here for an example of a library entry.]]
 <br>
 Our plan for the project week is to first  get a survey of all projects using registration. We hope to catch most of these projects from reviewing these project description pages, so it is important that if you use registration in your procedure, please make sure to mention explicitly.  We will collect as many example cases as possible, and select a few focus cases with particularly vexing registration challenges and begin to develop the appropriate tailored registration strategies.

2011 Winter Project Week:RegistrationCaseLibrary - Revision history

Meier: /* Key Investigators */

Meier: /* Key Investigators */

Meier at 00:59, 12 January 2011

Meier: /* Progress: Target Projects */

Meier: /* Key Investigators */

Meier at 20:30, 17 November 2010

Meier at 20:29, 17 November 2010

Meier at 20:28, 17 November 2010

Meier: Created page with '__NOTOC__ Registration Case Library =The 3DSlicer Registration Case Library Project= ==Key Investigators== * BWH: Dominik Meier, Ron Kikin…'

Meier: Created page with 'NOTOC Registration Case Library =The 3DSlicer Registration Case Library Project= ==Key Investigators== * BWH: Dominik Meier, Ron Kikin…'