2012 Summer Project Week:BK-PLUS Integration - Revision history

Lasso: /* Key Investigators */

2012-06-22T13:00:32Z

Key Investigators

Lasso: /* Detailed Plan */

2012-06-16T04:26:21Z

Detailed Plan

Lasso: /* Detailed Plan */

2012-06-16T04:23:25Z

Detailed Plan

Lasso at 04:20, 16 June 2012

2012-06-16T04:20:10Z

Lasso at 04:15, 16 June 2012

2012-06-16T04:15:33Z

Lasso at 04:00, 16 June 2012

2012-06-16T04:00:49Z

Lasso: Created page with 'NOTOC Image:PW-MIT2012.png|Projects List Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus…'

2012-06-16T03:06:08Z

Created page with '__NOTOC__ <gallery> Image:PW-MIT2012.png|Projects List Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus…'

New page

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus callosum of a normal brain.
Image:genuFA.jpg|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.
</gallery>

==Instructions for Use of this Template==
#Please create a new wiki page with an appropriate title for your project using the convention 2012_Winter_Project_Week:<Project Name>
#Copy the entire text of this page into the page created above
#Link the created page into the list of projects for the project event
#Delete this section from the created page
#Send an email to tkapur at bwh.harvard.edu if you are stuck

==Key Investigators==
* Queen's: Andras Lasso
* BWH: Andriy Fedorov, Isaiah Norton

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
Make live ultrasound images acquired by a BK ProFocus scanner available in 3D Slicer.

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>

Create a new video source class in the PLUS toolkit that receives the data from the scanner. PLUS can stream the live data through OpenIGTLink to Slicer.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>
New interface class created in PLUS that can receive the RF data and do basic B-mode conversion through a CameraLink framegrabber (any DALSA card with Sapera SDK).

</div>
</div>

==Delivery Mechanism==

Integrating new features in PLUS and SlicerIGT extensions.

==References==
* https://www.assembla.com/spaces/plus
* https://www.assembla.com/spaces/slicerigt
* http://www.teledynedalsa.com/mv/products/saperaEssential.aspx

@@ Line 42: / Line 42: @@
 During the project week:
 * Add user option to record B-mode or RF-mode image
-* Tentative: get displayed image data through the TCP/IP research interface. Need to apply a fix to Grabbie (Isaiah knows the details). Need to extend the BK interface class or create a new one.
+* Tentative: get displayed image data through the TCP/IP research interface. Need to apply a fix to Grabbie (Isaiah knows the details). Need to extend the BK interface class or create a new one. => Isaiah need to test the frame rate first
 * Tentative: Try PLUS with the Black Magic Design HD capture card
 * Tentative: scan conversion from RF-mode (currently only intensities are converted, but the scanlines are not mapped to physical space). Algorithm may be available in Grabbie or could ask Mehdi, or implement a new one.

@@ Line 42: / Line 42: @@
 During the project week:
 * Add user option to record B-mode or RF-mode image
 * Tentative: get displayed image data through the TCP/IP research interface. Need to apply a fix to Grabbie (Isaiah knows the details). Need to extend the BK interface class or create a new one.
 * Tentative: Try PLUS with the Black Magic Design HD capture card
 In the AMIGO suite:

@@ Line 30: / Line 30: @@
 <h3>Progress</h3>
 New interface class created in PLUS that can receive the RF data and do basic B-mode conversion through a CameraLink framegrabber (any DALSA card with Sapera SDK).
+Initial testing in AMIGO has been completed, several minor problems has been resolved, a few remaining ones will be addressed in the coming days.
 </div>
 </div>

@@ Line 22: / Line 22: @@
 <h3>Approach, Plan</h3>
-Create a new video source class in the PLUS toolkit that receives the data from the scanner. PLUS can stream the live data through OpenIGTLink to Slicer.
+Create a new video source class in the PLUS toolkit that receives the data from the scanner. PLUS can stream the live data through OpenIGTLink to Slicer. Preparation and initial testing before and during the project week. Extensive testing and tuning in the AMIGO suite on Saturday.
 </div>
@@ Line 44: / Line 37: @@
 Integrating new features in PLUS and SlicerIGT extensions.
 ==References==

@@ Line 2: / Line 2: @@
 <gallery>
 Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
-Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus callosum of a normal brain.
+Image:BkProFocus.jpg|BK ProFocus ultrasound scanner
-Image:genuFA.jpg|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.
+Image:LiveUltrasoundModule-Slicer4_2.jpg|Live ultrasound in 3D Slicer
 </gallery>

@@ Line 5: / Line 5: @@
 Image:genuFA.jpg|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.
 </gallery>
 ==Key Investigators==
@@ Line 21: / Line 14: @@
 <h3>Objective</h3>
-Make live ultrasound images acquired by a BK ProFocus scanner available in 3D Slicer.
+Make live ultrasound images acquired by a BK ProFocus scanner in the AMIGO suite at BWH available in 3D Slicer.
 </div>
@@ Line 30: / Line 23: @@
 Create a new video source class in the PLUS toolkit that receives the data from the scanner. PLUS can stream the live data through OpenIGTLink to Slicer.
 </div>
@@ Line 48: / Line 48: @@
 * https://www.assembla.com/spaces/plus
 * https://www.assembla.com/spaces/slicerigt
 * http://www.teledynedalsa.com/mv/products/saperaEssential.aspx

2012 Summer Project Week:BK-PLUS Integration - Revision history

Lasso: /* Key Investigators */

Lasso: /* Detailed Plan */

Lasso: /* Detailed Plan */

Lasso at 04:20, 16 June 2012

Lasso at 04:15, 16 June 2012

Lasso at 04:00, 16 June 2012

Lasso: Created page with '__NOTOC__ Image:PW-MIT2012.png|Projects List Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus…'

Lasso: Created page with 'NOTOC Image:PW-MIT2012.png|Projects List Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus…'