2012 Winter Project Week:GBMseg - Revision history

Mmilch: /* Key Investigators */

2012-01-10T17:21:44Z

Key Investigators

2012-01-10T17:00:17Z

Delivery Mechanism

2012-01-10T16:59:16Z

Delivery Mechanism

2012-01-10T16:00:16Z

References

2012-01-09T15:59:16Z

Key Investigators

2012-01-06T16:48:10Z

2012-01-05T16:02:21Z

References

2012-01-05T16:02:08Z

Delivery Mechanism

2012-01-05T16:00:43Z

Key Investigators

2012-01-05T15:27:47Z

Instructions for Use of this Template

@@ Line 15: / Line 15: @@
 <h3>Approach, Plan</h3>
-The approach is to obtain accurate registration of a number of MR sequences of each tumor case, and analyze correlation with pathology data.
+The approach is to obtain accurate registration of a number of MR sequences of each tumor case, segment what is thought to be the tumor on T1 post contrast and analyze correlation with pathology data.
 </div>
@@ Line 22: / Line 22: @@
 <h3>Progress</h3>
 </div>
 </div>

@@ Line 28: / Line 28: @@
 ==Delivery Mechanism==
-Data preprocessing pipeline
+GBM MR preprocessing pipeline
 ==References==

← Older revision		Revision as of 16:59, 10 January 2012
Line 28:		Line 28:

	==Delivery Mechanism==		==Delivery Mechanism==
		+	Data preprocessing pipeline

	==References==		==References==

← Older revision		Revision as of 16:00, 10 January 2012
Line 30:		Line 30:

	==References==		==References==
		+	GrowCut segmentation Slicer documentation: http://wiki.slicer.org/slicerWiki/index.php/Modules:GrowCutSegmentation-Documentation-3.6

		+	V. Vezhnevets and V. Konouchine, "GrowCut - Interactive multi-label N-D image segmentation," in Proc. Graphicon, 2005. pp. 150--156.
		+
		+	Mark Jenkinson, Stephen Smith. "Optimisation in Robust Linear Registration of Brain Images." FMRIB Technical Report TR00MJ2, http://www.fmrib.ox.ac.uk/analysis/techrep/tr00mj2/tr00mj2/
		+
	</div>		</div>

@@ Line 7: / Line 7: @@
 <h3>Objective</h3>
-We are looking to segment and visualize GBM's from various MR sequences in Slicer, and create an integrated display for clinisian review, both radiologist and non-radiologist.
+We are looking to segment and visualize GBM's from various MR sequences in Slicer, and create an integrated display for clinician review, both radiologist and non-radiologist.
 </div>

@@ Line 1: / Line 1: @@
 ==Key Investigators==
 * WUSM: Dan Marcus, Misha Milchenko
-* Brigham and Women's: Andrey Fedorov
+* Brigham and Women's: Andrey Fedorov, Jan Egger
 <div style="margin: 20px;">

← Older revision		Revision as of 16:02, 5 January 2012
Line 30:		Line 30:

	==References==		==References==
−	*Fletcher P, Tao R, Jeong W, Whitaker R. [http://www.na-mic.org/publications/item/view/634 A volumetric approach to quantifying region-to-region white matter connectivity in diffusion tensor MRI.] Inf Process Med Imaging. 2007;20:346-358. PMID: 17633712.
−	* Corouge I, Fletcher P, Joshi S, Gouttard S, Gerig G. [http://www.na-mic.org/publications/item/view/292 Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.] Med Image Anal. 2006 Oct;10(5):786-98. PMID: 16926104.
−	* Corouge I, Fletcher P, Joshi S, Gilmore J, Gerig G. [http://www.na-mic.org/publications/item/view/1122 Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.] Int Conf Med Image Comput Comput Assist Interv. 2005;8(Pt 1):131-9. PMID: 16685838.
−	* Goodlett C, Corouge I, Jomier M, Gerig G, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .

	</div>		</div>

← Older revision		Revision as of 15:27, 5 January 2012
Line 1:		Line 1:
−	~~==Instructions for Use of this Template==~~
−	~~#Please create a new wiki page with an appropriate title for your project using the convention 2012_Winter_Project_Week:<Project Name>~~
−	~~#Copy the entire text of this page into the page created above~~
−	~~#Link the created page into the list of projects for the project event~~
−	~~#Delete this section from the created page~~
−	~~#Send an email to tkapur at bwh.harvard.edu if you are stuck~~
	==Key Investigators==		==Key Investigators==
	* UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig		* UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig