2012 Winter Project Week:GeomIndicesSlicer4 - Revision history

Petersv: /* Key Investigators */

2012-01-11T21:23:38Z

Key Investigators

Petersv at 15:35, 9 December 2011

2011-12-09T15:35:03Z

Petersv: Created page with 'NOTOC ==Key Investigators== * BWH: Peter Savadjiev

Objective
The objective…'

2011-12-09T15:29:57Z

Created page with '__NOTOC__ ==Key Investigators== * BWH: Peter Savadjiev <div style="margin: 20px;"> <div style="width: 27%; float: left; padding-right: 3%;"> <h3>Objective</h3> The objective…'

New page

__NOTOC__

==Key Investigators==
* BWH: Peter Savadjiev

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<h3>Objective</h3>

The objective is to port to Slicer4 an existing Slicer3 python module that implements the white matter geometry indices of Savadjiev et al. (2010).

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<h3>Approach, Plan</h3>

The last remaining step of the port is to modify the XML interface of the Python module to match the requirements of Slicer 4.

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<h3>Progress</h3>

At the June 2011 project week, a script was created for automatic testing of the module. Given a set of sample input and the corresponding pre-computed output, the script calls the module and verifies that the output produced by the module matches the correct pre-computed output.

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==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a Slicer4 python extension module.

==References==
* Savadjiev P, Kindlmann GK, Bouix S, Shenton ME, Westin C-F. Local White Matter Geometry from Diffusion Tensor Gradients. Neuroimage 49, 3175-3186, 2010.

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← Older revision		Revision as of 21:23, 11 January 2012
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	At the June 2011 project week, a script was created for automatic testing of the module. Given a set of sample input and the corresponding pre-computed output, the script calls the module and verifies that the output produced by the module matches the correct pre-computed output.		At the June 2011 project week, a script was created for automatic testing of the module. Given a set of sample input and the corresponding pre-computed output, the script calls the module and verifies that the output produced by the module matches the correct pre-computed output.
		+
		+	At the January 2012 project week, I learned that the XML interface mechanism for CLI python modules has not been ported to Slicer4 yet. Steve promised to look into this. When this mechanism is ported to Slicer4, the module will be ready to be used in Slicer4.

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 ==References==
-* Savadjiev P, Kindlmann GK, Bouix S, Shenton ME, Westin C-F. Local White Matter Geometry from Diffusion Tensor Gradients. Neuroimage 49, 3175-3186, 2010.
+* Savadjiev P, Kindlmann GL, Bouix S, Shenton ME, Westin C-F. Local White Matter Geometry from Diffusion Tensor Gradients. Neuroimage 49, 3175-3186, 2010.
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2012 Winter Project Week:GeomIndicesSlicer4 - Revision history

Petersv: /* Key Investigators */

Petersv at 15:35, 9 December 2011

Petersv: Created page with '__NOTOC__ ==Key Investigators== * BWH: Peter Savadjiev Objective The objective…'

Objective

Petersv: Created page with 'NOTOC ==Key Investigators== * BWH: Peter Savadjiev

Objective
The objective…'