2012 Winter Project Week:UserInTheLoop InteractiveSegmn - Revision history

Pkarasev: /* Key Investigators */

2012-01-13T16:31:34Z

Key Investigators

Pkarasev at 16:30, 13 January 2012

2012-01-13T16:30:45Z

Pkarasev: /* Key Investigators */

2012-01-13T16:22:54Z

Key Investigators

Pkarasev: /* Key Investigators */

2012-01-13T16:20:32Z

Key Investigators

Ivan.kolesov at 21:30, 31 December 2011

2011-12-31T21:30:45Z

Ivan.kolesov at 21:30, 31 December 2011

2011-12-31T21:30:13Z

Ivan.kolesov at 21:27, 31 December 2011

2011-12-31T21:27:19Z

Ivan.kolesov at 21:23, 31 December 2011

2011-12-31T21:23:30Z

Ivan.kolesov at 21:16, 31 December 2011

2011-12-31T21:16:46Z

Ivan.kolesov: Created page with 'NOTOC Image:PW-SLC2012.png|Projects List Image:phantom_double.png|Synthetic example used for tests. ==Key Investig…'

2011-12-31T21:14:35Z

Created page with '__NOTOC__ <gallery> Image:PW-SLC2012.png|Projects List Image:phantom_double.png|Synthetic example used for tests. </gallery> ==Key Investig…'

New page

__NOTOC__
<gallery>
Image:PW-SLC2012.png|[[2012_Winter_Project_Week#Projects|Projects List]]
Image:phantom_double.png|Synthetic example used for tests.
</gallery>

==Key Investigators==
* Peter Karasev, Ivan Kolesov:Georgia Institute of Technology
* Karl Fritscher
* Allen Tannenbaum : Boston University

<div style="margin: 20px;">
<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Objective</h3>
*Goal: Improve the usability (speed, visualization, resource management) of the KSlice interactive segmentation algorithm.
*Test the algorithm on more data sets (so far, experiments on orthopedic MRI and limited CT datasets have been performed)
*Determine suggested energies to be used on different modalities/anatomic structures

</div>

<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
*Take advantage of the structure of deformation (parameterized deformation field).
*Perform approximate interpolation.
*Make algorithmic improvements to make algorithm usable on large 3D datasets.

</div>

<div style="width: 40%; float: left;">

<h3>Progress</h3>

</div>
</div>

<div style="width: 97%; float: left;">

==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a

#Slicer Module (via PLUS and OpenIGTLink)

==References==

</div>

@@ Line 37: / Line 37: @@
 <h3>Progress</h3>
-*Successfully segment some TBI and AF images on first try. TBI works great, AF a bit less so.
+*Successfully segment some TBI and AF images on first try. TBI works great, AF a bit less so due to the region-based nominal dynamics.
 *Profile with valgrind the bottlenecks in 3D application.
 *Generate some synthetic 3D test data to best align matlab and c++ codes' testing.

@@ Line 4: / Line 4: @@
 Image:Slicer_KSlice_brain.png|
 Image:KVoutSegTightMod.png|
 </gallery>

@@ Line 38: / Line 38: @@
 *Profile with valgrind the bottlenecks in 3D application.
 *Generate some synthetic 3D test data to best align matlab and c++ codes' testing.
 </div>
 </div>

@@ Line 28: / Line 28: @@
 *Experiment different energies on different modalities.
 *Reduce the memory consumption for multiple label maps.
-*Allow new user (you!) to try the algorithm on your data sets (to obtain feedback on its usability).
+*Allow new users (you!) to try the algorithm on your data sets (to obtain feedback on its usability).
 </div>

← Older revision		Revision as of 21:23, 31 December 2011
Line 49:		Line 49:
	==References==		==References==

		+	I. Kolesov, P. Karasev, G. Muller, K. Chudy, J. Xerogeanes,A. Tannenbaum. Human supervisory control framework for interactive medical image segmentation.Proceedings of MICCAI Computational Biomechanics for Medicine Workshop, 2011.

		+	P.Karasev, I.Kolesov, K.Chudy, G.Muller, J.Xerogeanes, A.Tannenbaum. Interactive MRI Segmentation with Controlled Active Vision. IEEE Conference on Decision and Control, 2011.
	</div>		</div>

@@ Line 7: / Line 7: @@
 ==Key Investigators==
-* Peter Karasev, Ivan Kolesov:Georgia Institute of Technology
+* Peter Karasev, Ivan Kolesov : Georgia Institute of Technology
-* Karl Fritscher
+* Karl Fritscher : BWH at Harvard and UMIT (Austria)
 * Allen Tannenbaum : Boston University
@@ Line 35: / Line 35: @@
 <h3>Progress</h3>
+*Successfully segment some TBI and AF images on first try. TBI works great, AF a bit less so.
 </div>
 </div>

@@ Line 16: / Line 16: @@
 <h3>Objective</h3>
 *Goal: Improve the usability (speed, visualization, resource management) of the KSlice interactive segmentation algorithm.
 *Determine suggested energies to be used on different modalities/anatomic structures
@@ Line 26: / Line 25: @@
 <h3>Approach, Plan</h3>
-*Take advantage of the structure of deformation (parameterized deformation field).
+*Test the algorithm on more data sets (so far, experiments on orthopedic MRI and limited CT datasets have been performed)
-*Perform approximate interpolation.
+*Experiment different energies on different modalities.
-*Make algorithmic improvements to make algorithm usable on large 3D datasets.
+*Reduce the memory consumption for multiple label maps.
 </div>

@@ Line 2: / Line 2: @@
 <gallery>
 Image:PW-SLC2012.png|[[2012_Winter_Project_Week#Projects|Projects List]]
-Image:phantom_double.png|Synthetic example used for tests.
+Image:Slicer_KSlice_brain.png|
 </gallery>

2012 Winter Project Week:UserInTheLoop InteractiveSegmn - Revision history

Pkarasev: /* Key Investigators */

Pkarasev at 16:30, 13 January 2012

Pkarasev: /* Key Investigators */

Pkarasev: /* Key Investigators */

Ivan.kolesov at 21:30, 31 December 2011

Ivan.kolesov at 21:30, 31 December 2011

Ivan.kolesov at 21:27, 31 December 2011

Ivan.kolesov at 21:23, 31 December 2011

Ivan.kolesov at 21:16, 31 December 2011

Ivan.kolesov: Created page with '__NOTOC__ Image:PW-SLC2012.png|Projects List Image:phantom_double.png|Synthetic example used for tests. ==Key Investig…'

Ivan.kolesov: Created page with 'NOTOC Image:PW-SLC2012.png|Projects List Image:phantom_double.png|Synthetic example used for tests. ==Key Investig…'