2013 Summer Project Week:Airway Inspector Porting - Revision history

Raul: /* Key Investigators */

2013-06-21T14:58:40Z

Key Investigators

Raul at 14:16, 21 June 2013

2013-06-21T14:16:30Z

Raul: /* Key Investigators */

2013-06-20T22:45:59Z

Key Investigators

Raul at 16:52, 16 June 2013

2013-06-16T16:52:16Z

Raul at 16:49, 16 June 2013

2013-06-16T16:49:24Z

Raul at 16:48, 16 June 2013

2013-06-16T16:48:35Z

Raul at 16:48, 16 June 2013

2013-06-16T16:48:08Z

Raul at 16:39, 16 June 2013

2013-06-16T16:39:10Z

Raul at 16:38, 16 June 2013

2013-06-16T16:38:25Z

Raul at 16:30, 16 June 2013

2013-06-16T16:30:15Z

@@ Line 8: / Line 8: @@
 ==Key Investigators==
-* BWH: Raul San Jose, Demian Wassermann, Rola Harmouche (BWH)
+* BWH: Raul San Jose, Demian Wassermann, Rola Harmouche, James Ross
 <h3>Background</h3>

@@ Line 4: / Line 4: @@
 Image:EmphysemaGUI.png|Emphysema Analysis Tool
 Image:AIScreenshot.png|Airway Analysis Tool
 </gallery>

← Older revision		Revision as of 22:45, 20 June 2013
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	The main libraries for lung and airway wall segmentation tools have been developed using C++ and VTK and have been validated and used in multiple clinical works.		The main libraries for lung and airway wall segmentation tools have been developed using C++ and VTK and have been validated and used in multiple clinical works.
		+
		+	We have created an extension to support this porting. We have developed two CLI to support the emphysema analsyis sub-module. A scripted python module is under development to encapsulate the logic.
		+
		+	The Airway Analysis Sub-module still is in the design phase.

@@ Line 3: / Line 3: @@
 Image:PW-MIT2013.png|[[2013_Summer_Project_Week#Projects|Projects List]]
 Image:EmphysemaGUI.png|Emphysema Analysis Tool
-Image:AirwayGUI.png|Airway Analysis Tool
+Image:AIScreenshot.png|Airway Analysis Tool
 </gallery>

@@ Line 2: / Line 2: @@
 <gallery>
 Image:PW-MIT2013.png|[[2013_Summer_Project_Week#Projects|Projects List]]
-[[Image:EmphysemaGUI.png|Emphysema Analysis Tool]]
+Image:EmphysemaGUI.png|Emphysema Analysis Tool
-[[File:AirwayGUI.png|Airway Analysis Tool]]
+Image:AirwayGUI.png|Airway Analysis Tool
 </gallery>

@@ Line 5: / Line 5: @@
 ==Key Investigators==
-* Rola Harmouche,Demian Wassermann, Raul San Jose (BWH)
+* BWH: Raul San Jose, Demian Wassermann, Rola Harmouche (BWH)
 <div style="margin: 20px;">
@@ Line 11: / Line 14: @@
 <h3>Objective</h3>
+Port the capabilities of Airway Inspector to Slicer4.
 </div>
@@ Line 19: / Line 21: @@
 <h3>Approach, Plan</h3>
-The library contains a set of tools for image processing, segmentation and airway and vessel generation  using particles and inspection. Some of these tools are described in the works by Ross et al. and Kindlmann et. al. Our plan for the project week is to port most of these tools to the CLI infrastructure and to define nipype interfaces.
+* Airway Analysis Sub-Module
 </div>
@@ Line 27: / Line 35: @@
 <h3>Progress</h3>
-The tools have been developed using C++ and ITK and have been validated and used in the works described previously.
+The  main libraries for lung and airway wall segmentation tools have been developed using C++ and VTK and have been validated and used in multiple clinical works.
@@ Line 38: / Line 46: @@
 #Slicer Module
-##Extension -- commandline
+##Extension — loadable modules
 ==References==
-* James C. Ross, R. San Jose Estepar, G. Kindlmann, Alejandro Diaz, C.-F. Westin, Edwin K. Silverman, George R. Washko, [Automatic Lung Lobe Segmentation Using Particles, Thin Plate Splines, and Maximum a Posteriori Estimation] Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010 Volume 6363, Pages 163-171, 2010
+* San Jose Estepar R, Washko GG, Silverman EK, Reilly JJ, Kikinis R, Westin CF. Airway inspector: An open source application for lung morphometry. In First International Workshop on Pulmonary Image Processing. New York City, USA, 2008;293-302. Available on-line: www.lulu.com/content/3507981.