2013 Summer Project Week:CARMA AutoLASeg - Revision history

Sbengali at 14:15, 21 June 2013

2013-06-21T14:15:34Z

Sbengali: /Added progress/

2013-06-21T03:30:07Z

Added progress

Sbengali at 03:00, 17 June 2013

2013-06-17T03:00:21Z

Sbengali at 21:47, 4 June 2013

2013-06-04T21:47:58Z

Sbengali at 21:47, 4 June 2013

2013-06-04T21:47:39Z

Sbengali at 21:47, 4 June 2013

2013-06-04T21:47:25Z

Sbengali: Created page with 'NOTOC Image:PW-MIT2012.png|Projects List ==Key Investigators== * Utah: Salma Bengali, Alan Morris, Josh Cates, Gop…'

2013-05-24T16:46:49Z

Created page with '__NOTOC__ <gallery> Image:PW-MIT2012.png|Projects List </gallery> ==Key Investigators== * Utah: Salma Bengali, Alan Morris, Josh Cates, Gop…'

New page

__NOTOC__
<gallery>
Image:PW-MIT2012.png|[[2013_Summer_Project_Week#Projects|Projects List]]
</gallery>

==Key Investigators==
* Utah: Salma Bengali, Alan Morris, Josh Cates, Gopal Veni, Ross Whitaker, Rob MacLeod

[[File:CARMA_GopalLASeg.png‎|thumb|center|Automated LA Segmentation]]

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<h3>Objective</h3>
The goal of this project is to implement Gopal and Ross' segmentation method: "Left atrial wall segmentation using intensity profile based feature detector and optimal graph-cuts." Our objective is to implement this method in Slicer. There are several fairly involved steps for the entire segmentation process, including:
# An LA shape model building phase
# User input to identify the center of a region of interest
# Computation of the segmentation, given a new LGE-MRI image
# Surface reconstruction of the output point set and (optionally) scan-conversion of the surface mesh to a binary segmentation volume.

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<div style="width: 27%; float: left; padding-right: 3%;">

<h3>Approach, Plan</h3>
# We plan to implement this algorithm as a Slicer command-line module.

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<h3>Progress</h3>

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==Delivery Mechanism==

This work will be delivered to the NA-MIC Kit as a Slicer module as part of the existing Cardiac MRI Toolkit extension.

==References==
*[http://www.na-mic.org/Wiki/index.php/DBP3:Utah Utah DBP]

@@ Line 31: / Line 31: @@
 <h3>Progress</h3>
-This module is nearly complete, and visualization of the output result is much better but will need some bug fixes such as proper centering. We have decided to store the training model data on a website like Midas, and leave it to the user to download the data.
+This module is nearly complete, and visualization of the output result is much better but will need some bug fixes such as proper centering. We have decided to store the training model data on a website like Midas, and leave it to the user to download the data. We will soon make it available in the nightly Slicer build.
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@@ Line 31: / Line 31: @@
 <h3>Progress</h3>
-This module has been nearly completed, and we need to improve the visualization of the final isosurface of the left atrium. We also need to find a way to store and access (through Slicer) a large amount of training model data.
+This module is nearly complete, and visualization of the output result is much better but will need some bug fixes such as proper centering. We have decided to store the training model data on a website like Midas, and leave it to the user to download the data.
 </div>
 </div>

@@ Line 31: / Line 31: @@
 <h3>Progress</h3>
-This module has been nearly completed, and we need to improve the visualization of the final isosurface of the left atrium.
+This module has been nearly completed, and we need to improve the visualization of the final isosurface of the left atrium. We also need to find a way to store and access (through Slicer) a large amount of training model data.
 </div>

@@ Line 31: / Line 31: @@
 <h3>Progress</h3>
+This module has been nearly completed, and we need to improve the visualization of the final isosurface of the left atrium.
 </div>

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 __NOTOC__
 <gallery>
-Image:PW-MIT2012.png|[[2013_Summer_Project_Week#Projects|Projects List]]
+Image:PW-MIT2013.png|[[2013_Summer_Project_Week#Projects|Projects List]]
 </gallery>

@@ Line 24: / Line 24: @@
 <h3>Approach, Plan</h3>
-# We plan to implement this algorithm as a Slicer command-line module.
+We plan to implement this algorithm as a Slicer command-line module.
 </div>

2013 Summer Project Week:CARMA AutoLASeg - Revision history

Sbengali at 14:15, 21 June 2013

Sbengali: /*Added progress*/

Sbengali at 03:00, 17 June 2013

Sbengali at 21:47, 4 June 2013

Sbengali at 21:47, 4 June 2013

Sbengali at 21:47, 4 June 2013

Sbengali: Created page with '__NOTOC__ Image:PW-MIT2012.png|Projects List ==Key Investigators== * Utah: Salma Bengali, Alan Morris, Josh Cates, Gop…'

Sbengali: /Added progress/

Sbengali: Created page with 'NOTOC Image:PW-MIT2012.png|Projects List ==Key Investigators== * Utah: Salma Bengali, Alan Morris, Josh Cates, Gop…'