https://www.na-mic.org/w/index.php?action=history&feed=atom&title=2013_Summer_Project_Week%3ATemperature_Mapping2013 Summer Project Week:Temperature Mapping - Revision history2026-04-04T07:06:25ZRevision history for this page on the wikiMediaWiki 1.33.0https://www.na-mic.org/w/index.php?title=2013_Summer_Project_Week:Temperature_Mapping&diff=81079&oldid=prevTorabi: Created page with '__NOTOC__ <gallery> Image:PW-MIT2012.png|Projects List Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus…'2013-05-17T20:34:24Z<p>Created page with '__NOTOC__ <gallery> Image:PW-MIT2012.png|<a href="/wiki/2012_Summer_Project_Week#Projects" title="2012 Summer Project Week">Projects List</a> Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus…'</p>
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Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]<br />
Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus callosum of a normal brain.<br />
Image:genuFA.jpg|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.<br />
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==Instructions for Use of this Template==<br />
#Please create a new wiki page with an appropriate title for your project using the convention 2012_Winter_Project_Week:<Project Name><br />
#Copy the entire text of this page into the page created above<br />
#Link the created page into the list of projects for the project event<br />
#Delete this section from the created page<br />
#Send an email to tkapur at bwh.harvard.edu if you are stuck<br />
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==Key Investigators==<br />
* UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig<br />
* Utah: Tom Fletcher, Ross Whitaker<br />
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<h3>Objective</h3><br />
We are developing methods for analyzing diffusion tensor data along fiber tracts. The goal is to be able to make statistical group comparisons with fiber tracts as a common reference frame for comparison.<br />
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<h3>Approach, Plan</h3><br />
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Our approach for analyzing diffusion tensors is summarized in the IPMI 2007 reference below. The main challenge to this approach is <foo>.<br />
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Our plan for the project week is to first try out <bar>,...<br />
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<h3>Progress</h3><br />
Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the [[NA-MIC/Projects/Diffusion_Image_Analysis/DTI_Software_and_Algorithm_Infrastructure|DTI Software Infrastructure]] project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version (MEDIA 2006). Our recent IPMI 2007 paper includes a nonparametric regression method for analyzing data along a fiber tract.<br />
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==Delivery Mechanism==<br />
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This work will be delivered to the NA-MIC Kit as a (please select the appropriate options by noting YES against them below)<br />
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#ITK Module<br />
#Slicer Module<br />
##Built-in<br />
##Extension -- commandline<br />
##Extension -- loadable<br />
#Other (Please specify)<br />
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==References==<br />
*Fletcher P, Tao R, Jeong W, Whitaker R. [http://www.na-mic.org/publications/item/view/634 A volumetric approach to quantifying region-to-region white matter connectivity in diffusion tensor MRI.] Inf Process Med Imaging. 2007;20:346-358. PMID: 17633712.<br />
* Corouge I, Fletcher P, Joshi S, Gouttard S, Gerig G. [http://www.na-mic.org/publications/item/view/292 Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.] Med Image Anal. 2006 Oct;10(5):786-98. PMID: 16926104.<br />
* Corouge I, Fletcher P, Joshi S, Gilmore J, Gerig G. [http://www.na-mic.org/publications/item/view/1122 Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.] Int Conf Med Image Comput Comput Assist Interv. 2005;8(Pt 1):131-9. PMID: 16685838.<br />
* Goodlett C, Corouge I, Jomier M, Gerig G, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .</div>Torabi