2014 Summer Project Week: Pectoralis muscle segmentation - Revision history

Rharmo at 14:29, 27 June 2014

2014-06-27T14:29:06Z

2014-06-27T14:14:05Z

2014-06-27T14:05:56Z

2014-06-27T14:03:57Z

2014-06-27T14:03:30Z

2014-06-27T14:01:49Z

2014-06-27T14:00:39Z

2014-06-27T13:28:18Z

2014-06-27T13:27:32Z

2014-06-27T12:17:54Z

Project Description

@@ Line 26: / Line 26: @@
 <div style="width: 27%; float: left; padding-right: 3%;">
 <h3>Progress</h3>
-* Worked on ensuring that the python packages that we need can be compatible with Slicer (thanks to Hans and Steve). Dealt with many compatibility issues (numpy, scipy, scikit, pygco) between the code that was developed using Canopy python and Slicer's python .
+* Worked on ensuring that the python packages that we need can be compatible with Slicer (thanks to Hans Johnson and Steve Pieper). Dealt with many compatibility issues (numpy, scipy, scikit, pygco) between the code that was developed using Canopy python and Slicer's python .
-* Got help with the image-based registration between the test and training cases from Brad using SimpleITK. He gave me an ipython notebook.
+* Got help with the image-based registration between the test and training cases from Bradley Lowekamp using SimpleITK. He gave me an ipython notebook.
 * Incorporating the segmentation code into a python module (but without the atlas creation for now). It successfully runs bit we are still having trouble visualizing the output.

@@ Line 26: / Line 26: @@
 <div style="width: 27%; float: left; padding-right: 3%;">
 <h3>Progress</h3>
-* Worked on ensuring that the python packages that we need can be compatible with Slicer (thanks to Hans and Steve). Dealt with many compatibility issues between the code that was developed using Canopy python.
+* Worked on ensuring that the python packages that we need can be compatible with Slicer (thanks to Hans and Steve). Dealt with many compatibility issues (numpy, scipy, scikit, pygco) between the code that was developed using Canopy python and Slicer's python .
 * Got help with the image-based registration between the test and training cases from Brad using SimpleITK. He gave me an ipython notebook.
 * Incorporating the segmentation code into a python module (but without the atlas creation for now). It successfully runs bit we are still having trouble visualizing the output.

@@ Line 28: / Line 28: @@
 * Worked on ensuring that the python packages that we need can be compatible with Slicer (thanks to Hans and Steve). Dealt with many compatibility issues between the code that was developed using Canopy python.
 * Got help with the image-based registration between the test and training cases from Brad using SimpleITK. He gave me an ipython notebook.
 </div>
 </div>

@@ Line 2: / Line 2: @@
 <gallery>
 Image:PW-SLC2014.png|[[2014_Winter_Project_Week#Projects|Projects List]]
 </gallery>
@@ Line 28: / Line 29: @@
 * Got help with the image-based registration between the test and training cases from Brad using SimpleITK. He gave me an ipython notebook.
 </div>
 </div>

@@ Line 28: / Line 28: @@
 * Got help with the image-based registration between the test and training cases from Brad using SimpleITK. He gave me an ipython notebook.
-[[File:Screen_Shot_2014-06-27_at_9.50.20_AM.png]]
+Image:Screen_Shot_2014-06-27_at_9.50.20_AM.png| GUI
 </div>
 </div>