2016 Summer Project Week/Segmentation Editor and Terminology - Revision history

Naucoin: /* Project Description */

2016-06-25T09:06:21Z

Project Description

Naucoin: /* Project Description */

2016-06-25T08:57:36Z

Project Description

Naucoin: /* Project Description */

2016-06-25T08:07:30Z

Project Description

Naucoin at 07:51, 25 June 2016

2016-06-25T07:51:06Z

Fedorov at 02:22, 25 June 2016

2016-06-25T02:22:55Z

Fedorov at 02:20, 25 June 2016

2016-06-25T02:20:56Z

Fedorov: /* Implementation approach */

2016-06-23T21:16:47Z

Implementation approach

Fedorov: /* Implementation approach */

2016-06-23T21:16:17Z

Implementation approach

Fedorov: /* Key Investigators */

2016-06-23T21:14:39Z

Key Investigators

Naucoin: /* Key Investigators */

2016-06-23T10:28:19Z

Key Investigators

@@ Line 58: / Line 58: @@
 ** Add tool tips showing terminology, as in Colors module, see [https://github.com/Slicer/Slicer/blob/master/Libs/MRML/Widgets/qMRMLColorModel.cxx#L340 qMRMLColorModel] (Csaba)
 * Met with Andrey and he filled in use cases below
 * Next Steps:
 ** Continue working on CTK widget update/integration

@@ Line 58: / Line 58: @@
 ** Add tool tips showing terminology, as in Colors module, see [https://github.com/Slicer/Slicer/blob/master/Libs/MRML/Widgets/qMRMLColorModel.cxx#L340 qMRMLColorModel] (Csaba)
 * Met with Andrey and he filled in use cases below
 |}

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 <!-- Approach and Plan bullet points -->
 * The initial plan was for the Segment Editor to incoporate the display of terminology, ported from the Editor module. The next stage is to add support for editing the terminologies and adding new ones.
-* Review overview sildes [https://www.slicer.org/slicerWiki/index.php/File:20160526_Segmentations.pptx  Segmentations]
+* Review overview slides [https://www.slicer.org/slicerWiki/index.php/File:20160526_Segmentations.pptx  Segmentations]
 * Source code review: [https://subversion.assembla.com/svn/slicerrt/trunk/SlicerRt/src/  SlicerRT] ([https://github.com/SlicerRt/SlicerRT/ github mirror]), with a focus on containers (vtkSegment, vtkSegmentation, vtkMRMLSegmentationNode), and widget GUI (Segmentations Widgets qMRMLSegmentsTableView)
 * Compare to web app for populating SEG metadata: http://qiicr.org/dcmqi ([https://github.com/QIICR/dcmqi/tree/gh-pages github source])
@@ Line 49: / Line 49: @@
 *** Bring up the CTK color picker by default on adding a new segment to set/edit the default color/terminology (Csaba)
 *** Extend/fix the CTK color picker:
-**** Show the custom color node by default not the Generic Anatomy one (Nicole)
+**** Show the custom color node by default not the Generic Anatomy one (Nicole - fixed in Colors module)
 **** How to best show if adding a new color or editing an old one?
 **** Fix the bug where you can pick a new color for a segment, but if you click on a different color in the color picker's table it still sets the color for the entry that was clicked in the editor GUI (disable selection highlight?) (Nicole)
 **** Add display of the terminology associated with the color node displayed (Nicole)
 **** Add terminology editing/look up to set a new terminology (Nicole - post project week)
 ** Consider loading a segmentation node from disk and rebuilding the custom terminology - will each segment need to have a the terminology category, property, region and modifiers set?
 ** Add tool tips showing terminology, as in Colors module, see [https://github.com/Slicer/Slicer/blob/master/Libs/MRML/Widgets/qMRMLColorModel.cxx#L340 qMRMLColorModel] (Csaba)
 |}

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 * Andras Lasso (Queen's)
 * Christian Herz (BWH)
 {| class="wikitable"

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 Image:TerminologyInEditor.jpg|Slicer 4.5 Editor with terminology
 Image:Terminology_web_app.jpg|Component of the dcmqi web app for populating terminology
 </gallery>

← Older revision		Revision as of 21:16, 23 June 2016
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	** Marco confirmed that qiicr.org/dcmqi renders correctly in Qt 5.6 (used in MITK); it does not render in Slicer Qt 4.x webkit		** Marco confirmed that qiicr.org/dcmqi renders correctly in Qt 5.6 (used in MITK); it does not render in Slicer Qt 4.x webkit
	* We will continue with prototyping in the web app (add support for color picker and dictionary selection)		* We will continue with prototyping in the web app (add support for color picker and dictionary selection)
		+	** web app color picker issue https://github.com/QIICR/dcmqi/issues/21

← Older revision		Revision as of 21:16, 23 June 2016
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	* Slicer widget vs CTK widget: consensus seems to be that CTK widget makes sense		* Slicer widget vs CTK widget: consensus seems to be that CTK widget makes sense
	* Qt widget vs web app: considering that basic web app already exists, it may make sense to experiment reusing it; Marco notes that it may be futile to experiment with web app integration in Slicer using the current Qt 4		* Qt widget vs web app: considering that basic web app already exists, it may make sense to experiment reusing it; Marco notes that it may be futile to experiment with web app integration in Slicer using the current Qt 4
		+	** Marco confirmed that qiicr.org/dcmqi renders correctly in Qt 5.6 (used in MITK); it does not render in Slicer Qt 4.x webkit
		+	* We will continue with prototyping in the web app (add support for color picker and dictionary selection)

@@ Line 9: / Line 9: @@
 * Csaba Pinter (Queens)
 * Andrey Fedorov (BWH)
 {| class="wikitable"