2016 Winter Project Week/Projects/TractographyModuleDevelop&Test - Revision history

Fan: /* Project Description */

2016-01-08T15:39:36Z

Project Description

2016-01-08T15:06:13Z

Project Description

2016-01-04T18:26:47Z

Project Description

2016-01-04T04:31:29Z

Key Investigators

2016-01-04T04:29:40Z

2016-01-04T04:24:08Z

Project Description

2015-12-24T13:45:43Z

Project Description

2015-12-21T18:03:42Z

Project Description

2015-12-21T17:31:16Z

Fixed up table formatting

2015-12-19T18:25:51Z

Project Description

@@ Line 28: / Line 28: @@
 * FiberEndPointFromLabelMap: Allow a user to calculate the number of fiber endpoints touching certain regions according to a label map. The label map is provided by users, which can be generated from, e.g., Freesurfer.
+|
-* Coding - Finishing
+* Coding - Finished
-* Testing - Finishing
+* Testing - Finished
 * Integration - Ongoing
 |}

@@ Line 28: / Line 28: @@
 * FiberEndPointFromLabelMap: Allow a user to calculate the number of fiber endpoints touching certain regions according to a label map. The label map is provided by users, which can be generated from, e.g., Freesurfer.
+|
+* Coding - Finishing
 |}
 ==Background and References==
 <!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data -->

@@ Line 24: / Line 24: @@
 * Develop new modules for tractography processing.
+|
-* FiberTractMeasurements: Compute a set of different scalar measurements (such as FA and trace) from fiber tracts.
+* FiberTractMeasurements (in Slicer now): Compute a set of different scalar measurements (such as FA and trace) from fiber tracts.
 * FiberTractClean: Using an input whole brain mask, remove spurious fibers that are very parallel to the surface of the mask (e.g. in skull or CSF). Also remove very short fibers (by default those with fewer than 2 points, which are just an artifact of unsuccessful seeding).
 * FiberEndPointFromLabelMap: Allow a user to calculate the number of fiber endpoints touching certain regions according to a label map. The label map is provided by users, which can be generated from, e.g., Freesurfer.

@@ Line 12: / Line 12: @@
 * Isaiah Norton, BWH
 * Lauren O'Donnell, BWH
 ==Project Description==

@@ Line 2: / Line 2: @@
 <gallery>
 Image:PW-MIT2016.png|link=2016_Winter_Project_Week#Projects|[[2016_Winter_Project_Week#Projects|Projects List]]
 <!-- Use the "Upload file" link on the left and then add a line to this list like "File:MyAlgorithmScreenshot.png" -->
 </gallery>

@@ Line 19: / Line 19: @@
 |- style="vertical-align:top;"
+|
 * Develop new modules for tractography processing.
 * Add test cases for existing modules in Tractography category of 3D Slicer.
+|
+*
+|
+*
 |}

@@ Line 15: / Line 15: @@
 {| class="wikitable"
 ! style="text-align: left; width:27%" |   Objective
-! style="text-align: left; width:27%" |   Approach, Plan
+! style="text-align: left; width:27%" |   Approach and Plan
 ! style="text-align: left; width:27%" |   Progress and Next Steps
 |- style="vertical-align:top;"
@@ Line 29: / Line 29: @@
+*
 |}
 ==Background and References==
 <!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data -->

@@ Line 17: / Line 17: @@
 ! style="text-align: left; width:27%" |       Objective
 <!-- Add a bulleted list of key points -->
+* Delevep new modules for tractography processing.
 ! style="text-align: left; width:27%" |       Approach, Plan