CTSC:ARRA.091410 - Revision history

Valerie.humblet: /* Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010 */

2010-09-14T15:15:35Z

Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010

Valerie.humblet: /* Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010 */

2010-09-14T15:15:13Z

Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010

Valerie.humblet: /* XNAT -- mi2b2 integration */

2010-09-14T15:13:11Z

XNAT -- mi2b2 integration

Valerie.humblet: /* Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010 */

2010-09-14T15:05:54Z

Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010

Valerie.humblet at 15:05, 14 September 2010

2010-09-14T15:05:14Z

Valerie.humblet: /* Harvard Catalyst Medical Informatics group Meeting Minutes September 014, 2010 */

2010-09-14T15:00:03Z

Harvard Catalyst Medical Informatics group Meeting Minutes September 014, 2010

Valerie.humblet: /* Harvard Catalyst Medical Informatics group Meeting Minutes September 014, 2010 */

2010-09-14T14:54:59Z

Harvard Catalyst Medical Informatics group Meeting Minutes September 014, 2010

Valerie.humblet: /* Meeting Minutes */

2010-09-14T14:54:31Z

Meeting Minutes

Valerie.humblet: /* mi2b2 software update */

2010-09-14T14:52:20Z

mi2b2 software update

Valerie.humblet at 14:51, 14 September 2010

2010-09-14T14:51:33Z

@@ Line 20: / Line 20: @@
 * Valerie Humblet
 * Yong Gao
 * Charles McGovern
 * Katie Andriole (phone)
 * Mark Anderson (phone)
 * Alex Zeitsev (phone)
+* Jesse Wei (phone)
 <br>

@@ Line 21: / Line 21: @@
 * Yong Gao
 * Jesse Wei
 * Katie Andriole (phone)
 * Mark Anderson (phone)

← Older revision		Revision as of 15:13, 14 September 2010
Line 41:		Line 41:
	** allow XNAT user to ask i2b2 if the password given to log on is correct.		** allow XNAT user to ask i2b2 if the password given to log on is correct.
	** test transfer of images to XNAT. We will need an admin set up in NAT which i2b2 knows the password for. The admin will have to create a subject in XNAT then push the data.		** test transfer of images to XNAT. We will need an admin set up in NAT which i2b2 knows the password for. The admin will have to create a subject in XNAT then push the data.
		+	* Everybody agreed that we need a new XNAT instance. Is it feasible to have it reside in the cloud? If so we must make sure that there is no PHS data. If not the instance will be beyond our firewall and it means getting a new IRB so the XNAT team can access it.

@@ Line 24: / Line 24: @@
 * Mark Anderson (phone)
 * Alex Zeitsev (phone)
 <br>

← Older revision		Revision as of 15:05, 14 September 2010
Line 39:		Line 39:

	=== Abstracts ===		=== Abstracts ===
−	* All the abstracts (CTSC Informatics and SIIMS) were ~~submtitted~~.	+	* All the abstracts (CTSC Informatics and SIIMS) were submitted.
		+
		+	=== XNAT -- mi2b2 integration ===
		+
		+	* There are 2 early tests to be done with XNAT:
		+	** allow XNAT user to ask i2b2 if the password given to log on is correct.
		+	** test transfer of images to XNAT. We will need an admin set up in NAT which i2b2 knows the password for. The admin will have to create a subject in XNAT then push the data.

@@ Line 7: / Line 7: @@
 <br>
-== Harvard Catalyst Medical Informatics group Meeting Minutes September 014, 2010 ==
+== Harvard Catalyst Medical Informatics group Meeting Minutes September 14, 2010 ==
 In attendance:

← Older revision		Revision as of 14:54, 14 September 2010
Line 41:		Line 41:

	* Randy supplied a list of MRNs and associated image data sets that can be used for testing at BWH and MGH. Chris and Ed did a test at BWH. Performance wise it was very good, CT and MRI were showing up in a couple of seconds. Among the test patients, a couple of studies were not showing up. Katie will take a look at it because some of the DICOM headers might have been manipulated and it would be the reason for the problem. At CHB Paul mentioned that they were not able to display the images but they can see the study and the transfer of data, it is either a visualization problem or linked to the decompression of data. Phase 3 programming continues to progress steadily. Chris and Bill are still working on "throttling" issues- controls for regulating image movement. Programmers are also working on the UI.		* Randy supplied a list of MRNs and associated image data sets that can be used for testing at BWH and MGH. Chris and Ed did a test at BWH. Performance wise it was very good, CT and MRI were showing up in a couple of seconds. Among the test patients, a couple of studies were not showing up. Katie will take a look at it because some of the DICOM headers might have been manipulated and it would be the reason for the problem. At CHB Paul mentioned that they were not able to display the images but they can see the study and the transfer of data, it is either a visualization problem or linked to the decompression of data. Phase 3 programming continues to progress steadily. Chris and Bill are still working on "throttling" issues- controls for regulating image movement. Programmers are also working on the UI.
		+
		+	=== Abstracts ===
		+	* All the abstracts (CTSC Informatics and SIIMS) were submtitted.

← Older revision		Revision as of 14:52, 14 September 2010
Line 40:		Line 40:
	=== mi2b2 software update ===		=== mi2b2 software update ===

−	* Randy supplied a list of MRNs and associated image data sets that can be used for testing at BWH and MGH. Chris and Ed did a test at BWH. Performance wise it was very good, CT and MRI were showing up in a couple of seconds. Among the test patients, a couple of studies were not showing up. Katie will take a look at it because some of the DICOM headers might have been manipulated and it would be the reason for the problem. At CHB Paul mentioned that they were not able to display the images but they can see the study and the transfer of data, it is either a visualization problem or linked to the decompression of data.	+	* Randy supplied a list of MRNs and associated image data sets that can be used for testing at BWH and MGH. Chris and Ed did a test at BWH. Performance wise it was very good, CT and MRI were showing up in a couple of seconds. Among the test patients, a couple of studies were not showing up. Katie will take a look at it because some of the DICOM headers might have been manipulated and it would be the reason for the problem. At CHB Paul mentioned that they were not able to display the images but they can see the study and the transfer of data, it is either a visualization problem or linked to the decompression of data. Phase 3 programming continues to progress steadily. Chris and Bill are still working on "throttling" issues- controls for regulating image movement. Programmers are also working on the UI.
−	Phase 3 programming continues to progress steadily. Chris and Bill are still working on "throttling" issues- controls for regulating image movement. Programmers are also working on the UI.