CTSC Brad Dickerson, MGH - Revision history

Wjp: /* Target Data Management Process (Step 1.) */

2009-07-27T21:20:39Z

Target Data Management Process (Step 1.)

2009-07-27T21:20:13Z

Target Processing Workflow (Step 3.)

2009-07-27T21:19:59Z

Fundamental Requirements

2009-07-27T21:18:02Z

Target Query Formulation (Step 2.)

2009-07-27T21:14:57Z

Target Data Management Process (Step 1.)

2009-07-27T21:09:00Z

Data

2009-07-27T21:05:17Z

Fundamental Requirements

2009-07-27T21:04:51Z

Fundamental Requirements

2009-07-27T21:04:25Z

Outcome Metrics

2009-07-27T21:02:10Z

Outcome Metrics

← Older revision		Revision as of 21:20, 27 July 2009
Line 60:		Line 60:

	==Target Data Management Process (Step 1.)==		==Target Data Management Process (Step 1.)==
		+
		+	(schematic to come)

	* Data from multiple file systems will be described and uploaded via an upload script or a light client into a single OFRR1 project on XNAT;		* Data from multiple file systems will be described and uploaded via an upload script or a light client into a single OFRR1 project on XNAT;

@@ Line 72: / Line 72: @@
 * Useful product would be a list of URIs of appropriate datasets
-==Target Processing Workflow (Step 3.)==
 =Other Information=

@@ Line 34: / Line 34: @@
 * accessibility
 * redundancy
-* enough documentation to support novice users / developers
+* enough documentation to support novice users / developers: as Mike Brickhouse comes up to speed, he will provide feedback about what was missing or challenging in the existing XNAT documentation.
 =Data=

← Older revision		Revision as of 21:18, 27 July 2009
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	== Target Query Formulation (Step 2.)==		== Target Query Formulation (Step 2.)==
		+	'''Step 2.''' Develop Query capabilities using scripted client calls to XNAT web services, such as:
		+
		+	Show all subjectIDs with age > 60 & MR with resolution=0.38mm
		+	Show all subjectIDs with age < 20 & MR with resolution=0.38mm
		+
		+	* Useful product would be a list (csv file?) of appropriate subject IDs, or
		+	* Useful product would be a list of URIs of appropriate datasets
		+
	==Target Processing Workflow (Step 3.)==		==Target Processing Workflow (Step 3.)==

← Older revision		Revision as of 21:14, 27 July 2009
Line 60:		Line 60:

	==Target Data Management Process (Step 1.)==		==Target Data Management Process (Step 1.)==
		+
		+	* Data from multiple file systems will be described and uploaded via an upload script or a light client into a single OFRR1 project on XNAT;

	== Target Query Formulation (Step 2.)==		== Target Query Formulation (Step 2.)==

@@ Line 37: / Line 37: @@
 =Data=
-The Dickerson lab has about 250 scans for their own studies, and 150 scans for collaborators. Scans include both MRI and fMRI.
+The Dickerson lab has about 250 scans for their own studies, and 150 scans for collaborators. Scans include both MRI and fMRI. Other data are stored with Excel spreadsheets.
 **Project
 **Imaging Modalities
 **Genetic
 *Storage needs
-Images files are currently scattered over several file servers on the same network.
+Images files are currently distributed over several file servers on the same network.
 =Workflows=

@@ Line 24: / Line 24: @@
 '''Step 1: Data Management'''
 * Visual confirmation (via web GUI) that all data is present, organized and named appropriately
 * other?
 '''Step 2: Query Formulation'''
-*  Successful tests that responses to XNAT queries (for all subjectIDs within some age range and with an MR with particular resolution) results returned from search on the local filesystem.
+*  Successful tests that responses to XNAT queries (for all subjectIDs within some age range and with an MR with particular resolution) results returned from search on the local file system.
 =Fundamental Requirements=