Andy: Update from Wiki

2006-12-18T19:38:39Z

Update from Wiki

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''Agenda for 9/21/05''

 '''Comparison of LSDIrecon and DTMRI scalar measures, also including Steve's "include zeros" functionality''' (details [[DBP:Harvard:Software:Testing:DTI:Slicer|here]])

# Differences in FA are always <0.25% (usually much smaller)
# Raul removed the Scale Factor, which seems to make Trace values very small compared to ADC
#* BUT DTMRI trace values are still consistent (in relative terms) with LSDIrecon ADC, i.e., always 250X smaller
# Including zeros (Steve's added button) did not make a difference. Does this mean 1) there is no difference, or 2) the "include zeros" button does not work?

 '''Diffusion cases acquired Coronal AP''' (details [[DBP:Harvard:Software:Bugs:Coregistration_5-11-05|here]])

* Fiber tracking seems to be fine on these cases

 '''2 ROI method for DTI fiber tracking''' (details [[DBP:Harvard:Software:Bugs:2ROI|here]])

* I can't get it to work- please help!
* "NOT" functionality: Raul is working on it

 '''Higher resolution scans on 3T''' (details [[DBP:Harvard:Software:Wish:3T_8-24-05|here]])

* Fibertracking was done after smoothing the tensor.

 '''Fiber clustering''' (details[[DBP:Harvard:Software:Wish:Cluster_3-29-05|here]])

* fiber backtracking/corpus labeling method?

 '''DTI case for Lynn DeLisi''' (details from Sylvain to Raul [[DBP:Harvard:Software:Minutes:9-7-05:DeLisi|here]])

* Marek, do we know what variables/examples she wants from us?

 

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 '''Other issues...'''

* '''Stephan's LSDIrecon code''' (details [[DBP:Harvard:Software:Wish:Stephan_code_8-24-05|here]])

* '''Background noise in DTMRI scalar measures''' (details [[DBP:Harvard:Software:Bugs:Noise|here]])

DBP:Harvard:Software:Minutes:9-21-05 - Revision history

Andy: Update from Wiki