DBP1:Harvard - Revision history

Melonakos at 19:06, 11 July 2009

2009-07-11T19:06:55Z

Melonakos at 21:55, 22 December 2007

2007-12-22T21:55:11Z

Melonakos at 21:46, 22 December 2007

2007-12-22T21:46:47Z

Dougm at 17:37, 18 December 2007

2007-12-18T17:37:46Z

Dougm at 17:37, 18 December 2007

2007-12-18T17:37:28Z

Dougm at 17:35, 18 December 2007

2007-12-18T17:35:06Z

Dougm at 17:30, 18 December 2007

2007-12-18T17:30:24Z

Dougm at 17:30, 18 December 2007

2007-12-18T17:30:06Z

Dougm at 17:29, 18 December 2007

2007-12-18T17:29:53Z

Dougm at 17:29, 18 December 2007

2007-12-18T17:29:07Z

@@ Line 10: / Line 10: @@
 = Harvard PNL Projects =
-{| cellpadding="10"
+{| cellpadding="10" style="text-align:left;"
 | style="width:15%" | [[Image:Shapecaudate.png|200px]]

@@ Line 23: / Line 23: @@
 |-
-| | [[Image:Clustering_small.png|200px]]
+| | [[Image:CingulumAllSubjectsFibers.png|200px]]
 | |
-== [[DBP:Harvard:Collaboration:MITDTI|Algorithms: Diffusion Tensor Imaging (PNL-MIT)]] ==
+== [[Projects:DTIClustering|DTI Fiber Clustering and Fiber-Based Analysis]] ==
-<font color="red">'''New: '''</font> Here we give something new and exciting about the project.  The most recent publication on this project is very appropriate for this slot.
+The goal of this project is to provide structural description of the white matter architecture as a partition into coherent fiber bundles and clusters, and to use these bundles for quantitative measurement. [[Projects:DTIClustering|More...]]
 |-
-| | [[Image:Seg-MIT.jpg|200px]]
+| | [[Image:Progress_Registration_Segmentation_Shape.jpg|200px]]
 | |
-== [[DBP:Harvard:Collaboration:MIT|Algorithms: Anatomical Segmentation (PNL-MIT)]] ==
+This type of algorithm assigns a tissue type to each voxel in the volume. Incorporating prior shape information biases the label assignment towards contiguous regions that are consistent with the shape model. [[Projects:ShapeBasedSegmentationAndRegistration|More...]]
-<font color="red">'''New: '''</font> Here we give something new and exciting about the project.  The most recent publication on this project is very appropriate for this slot.
+<font color="red">'''New: '''</font> K.M. Pohl, J. Fisher, S. Bouix, M. Shenton, R. W. McCarley, W.E.L. Grimson, R. Kikinis, and W.M. Wells. Using the Logarithm of Odds to Define a Vector Space on Probabilistic Atlases. Medical Image Analysis,11(6), pp. 465-477, 2007. <b>Best Paper Award MICCAI 2006 </b>
 |-
-| | [[Image:Striatum-GAT.jpg|200px]]
+| | [[Image:Striatum1.png|200px|]]
 | |
-== [[DBP:Harvard:Collaboration:GTech|Algorithms: Rule-based Segmentation (PNL-GaTech)]] ==
+== [[Projects:RuleBasedStriatumSegmentation|Rule-Based Striatum Segmentation]] ==
-<font color="red">'''New: '''</font> Here we give something new and exciting about the project.  The most recent publication on this project is very appropriate for this slot.
+In this work, we provide software to semi-automate the implementation of segmentation procedures based on expert neuroanatomist rules for the striatum. [[Projects:RuleBasedStriatumSegmentation|More...]]
 |-
-| |
+| | [[Image:DTIregistration200.png|200px]]
 | |
-== [[DBP:Harvard:Collaboration:Utah|Algorithms: Tensor Based Statistics (PNL-Utah)]] ==
+== [[Projects:DTIProcessingTools|Diffusion Tensor Image Processing Tools]] ==
 |-
@@ Line 66: / Line 71: @@
 == [[DBP:Harvard:Collaboration:Slicer|Engineering: Slicer Improvement and Testing]] ==
 This ongoing work conducts testing and development of new features in Slicer and provides a bridge between developers and researchers using the software. [[DBP:Harvard:Collaboration:Slicer|More...]]
 |-
@@ Line 75: / Line 80: @@
 == [[DBP:Harvard:Collaboration:Training|Training: Training Material and Expert Users Feedback]] ==
 Work in this area has created training materials for Slicer software with the input of expert users. [[DBP:Harvard:Collaboration:Training|More...]]
@@ Line 83: / Line 89: @@
 == [[DBP:Harvard:Collaboration:Toronto|Biology: Genetics and Imaging (Toronto)]] ==
 This collaboration is centered around a study of psychosis in schizophrenia and bipolar disorder, using a combination of genetics and diffusion tensor imaging. [[DBP:Harvard:Collaboration:Toronto|More...]]

← Older revision		Revision as of 21:46, 22 December 2007
Line 20:		Line 20:

	<font color="red">'''New: '''</font> G Gerig, S Joshi, T Fletcher, K Gorczowski, S Xu, S M. Pizer, M Styner: Statistics of populations of images and its embedded objects: Driving applications in neuroimaging, IEEE Symposium on Biomedical Imaging ISBI 2006.		<font color="red">'''New: '''</font> G Gerig, S Joshi, T Fletcher, K Gorczowski, S Xu, S M. Pizer, M Styner: Statistics of populations of images and its embedded objects: Driving applications in neuroimaging, IEEE Symposium on Biomedical Imaging ISBI 2006.
−
−	\|-
−
−	~~\| \| [[Image:Dti-UNC.jpg\|200px]]~~
−	~~\| \|~~
−
−	~~== [[DBP:Harvard:Collaboration:UNC\|Algorithms: Diffusion Tensor Imaging (PNL-UNC)]] ==~~
−	~~In this project we look to improve statistical analysis of diffusion measures along white matter fibers of interest. [[DBP:Harvard:Collaboration:UNC\|More...]]~~
−
−	~~<font color="red">'''New: '''</font> Here we give something new and exciting about the project. The most recent publication on this project is very appropriate for this slot.~~

	\|-		\|-

@@ Line 72: / Line 72: @@
 |-
-| | [[Image:EMABC.jpg|200px]]
+| |
 | |

@@ Line 72: / Line 72: @@
 |-
-| |
+| | [[Image:EMABC.jpg|200px]]
 | |

@@ Line 81: / Line 81: @@
 |-
-| |
+| | [[Image:Trainingslide.png|200px]]
 | |

@@ Line 3: / Line 3: @@
 = Overview of Harvard PNL DBP 1 =
-The Harvard Driving Biological Project uses structural MRI, diffusion-weighted MRI, and fMRI to study the neural bases of schizophrenia and related psychiatric disorders. The DBP is centered in the Psychiatry Neuroimaging Laboratory at Brigham and Women's Hospital in Boston, MA.
+The Harvard Driving Biological Project uses structural MRI, diffusion-weighted MRI, and fMRI to study the neural bases of schizophrenia and related psychiatric disorders. The DBP is centered in the Psychiatry Neuroimaging Laboratory (PNL) at Brigham and Women's Hospital in Boston, MA.
-For more information about the lab, please visit the [http://pnl.bwh.harvard.edu| lab website.]
+For more information about the PNL, please visit the [http://pnl.bwh.harvard.edu| lab website.]

← Older revision		Revision as of 17:30, 18 December 2007
Line 5:		Line 5:
	The Harvard Driving Biological Project uses structural MRI, diffusion-weighted MRI, and fMRI to study the neural bases of schizophrenia and related psychiatric disorders. The DBP is centered in the Psychiatry Neuroimaging Laboratory at Brigham and Women's Hospital in Boston, MA.		The Harvard Driving Biological Project uses structural MRI, diffusion-weighted MRI, and fMRI to study the neural bases of schizophrenia and related psychiatric disorders. The DBP is centered in the Psychiatry Neuroimaging Laboratory at Brigham and Women's Hospital in Boston, MA.

−	For more information about the lab, please visit [http://pnl.bwh.harvard.edu\|~~the~~ lab website.]	+	For more information about the lab, please visit the [http://pnl.bwh.harvard.edu\| lab website.]

@@ Line 2: / Line 2: @@
 __NOTOC__
 = Overview of Harvard PNL DBP 1 =
 The Harvard Driving Biological Project uses structural MRI, diffusion-weighted MRI, and fMRI to study the neural bases of schizophrenia and related psychiatric disorders. The DBP is centered around the Psychiatry Neuroimaging Laboratory at Brigham and Women's Hospital in Boston, MA.
@@ Line 9: / Line 7: @@
 For more information about the lab, please visit [http://pnl.bwh.harvard.edu|the lab website.]
 = Harvard PNL Projects =