DBP2:Queens:PerkStation - Revision history

Ungi at 15:27, 6 April 2010

2010-04-06T15:27:43Z

Ungi at 15:17, 6 April 2010

2010-04-06T15:17:51Z

Ungi at 15:17, 6 April 2010

2010-04-06T15:17:18Z

Ungi at 15:14, 6 April 2010

2010-04-06T15:14:39Z

Ungi at 15:13, 6 April 2010

2010-04-06T15:13:27Z

Ungi at 15:11, 6 April 2010

2010-04-06T15:11:02Z

Ungi at 15:10, 6 April 2010

2010-04-06T15:10:38Z

Ungi at 15:07, 6 April 2010

2010-04-06T15:07:42Z

Ungi at 14:54, 6 April 2010

2010-04-06T14:54:13Z

Ungi at 14:51, 6 April 2010

2010-04-06T14:51:53Z

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 * Perk Station tutorial dataset: [[Media:PerkStationTutorialDataset.zip|PerkStationTutorialDataset.zip]]
 * Perk Station hardware assembly instructions: coming soon...
 ==Publications==

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 *'''10/30/2009:''' ''Oblique slice support:'' Support needle insertion planning in any slice orientation.
 *'''11/30/2009:''' ''Software review:'' Review the software in terms of compliance to Slicer's interactive module architecture (with engineering core members).
-*'''01/06/2010:''' ''Deploy module as extension:'' Use Slicer's Extension framework to enable easy download and update of the software module.
+*'''01/06/2010:''' ''Deploy module as Slicer extension:'' Use Slicer's Extension framework to enable easy download and update of the software module.
 ==Tutorial==

@@ Line 5: / Line 5: @@
 [[Image:CT-Image-Overlay-Zinreich.JPG|400px|thumb|Image Overlay in clinical setup]]
 ==Objective==
 The objective of this project (PERK Station) is to develop a end-to-end solution implemented as a Slicer 3 module to assist in performing/training for image-guided percutaneous needle interventions. The software, along-with its hardware, overlays the image (CT/MR) acquired on the patient/phantom. The physician/trainee looks at the patient/phantom through a semi transparent mirror showing the image overlay and the CT/MR image appears to be floating inside the body with the correct size and position, as if the physician/trainee had 2D ‘X-ray vision’.
 ==Description==
@@ Line 31: / Line 29: @@
 *'''Validation''': If the needle insertion is needed to be validated, the user acquires a validation image with needle inside patient/phantom. The validation volume/image is loaded to scene. The user can give the actual needle entry and end points to get error calculations.
 *'''08/01/2009:''' ''Current status:'' All the core functionalities are implemented in a dynamically loadable Slicer module (one does not need to modify any of the Slicer code to use this module)
 *'''09/24/2009:''' ''Demonstration and tutorial:'' Demonstrated and provide one-on-one tutorials about the Perk Station on the MICCAI 2009 Conference (London, UK)
@@ Line 38: / Line 36: @@
 *'''11/30/2009:''' ''Software review:'' Review the software in terms of compliance to Slicer's interactive module architecture (with engineering core members).
 *'''01/06/2010:''' ''Deploy module as extension:'' Use Slicer's Extension framework to enable easy download and update of the software module.
 ==Tutorial==
@@ Line 50: / Line 42: @@
 * Perk Station tutorial dataset: [[Media:PerkStationTutorialDataset.zip|PerkStationTutorialDataset.zip]]
 * Perk Station hardware assembly instructions: coming soon...
 ==Publications==
@@ Line 61: / Line 52: @@
 *U-Thainual, P., G. Fischer, J. Carrino, G. Fichtinger, and I. Iordachita, "MR/CT Percutaneous Intervention Training Suite", 7th International Symposium on Interventional MRI, pp. 81-85, 2008.
 *U-Thainual, P., S. Vikal, I. Iordachita, and G. Fichtinger, "The Perk Station: Portable training station for percutaneous interventions", Orthopaedic Care Conference, 2008.
 ==Team==
@@ Line 71: / Line 61: @@
 *NA-MIC Engineering Contact: Katie Hayes, MSc, Brigham and Women's Hospital (hayes at bwh.harvard.edu)
 *Host Institutes: Queen's University & Johns Hopkins University
 ==Links==
 *[[DBP2:Queens|Queens DBP 2]]

@@ Line 47: / Line 47: @@
 ==Tutorial==
-* Perk Station: [[Media:PerkStationSlicerTutorial.pdf‎|PerkStationSlicerTutorial]] <font color="red">''New''</font>
+* Perk Station: [[Media:PerkStationSlicerTutorial.pdf‎|PerkStationSlicerTutorial]]
-* Perk Station tutorial dataset: [[Media:PerkStationTutorialDataset.zip|PerkStationTutorialDataset.zip]] <font color="red">''New''</font>
+* Perk Station tutorial dataset: [[Media:PerkStationTutorialDataset.zip|PerkStationTutorialDataset.zip]]
 * Perk Station hardware assembly instructions: coming soon...

@@ Line 39: / Line 39: @@
 *'''01/06/2010:''' ''Deploy module as extension:'' Use Slicer's Extension framework to enable easy download and update of the software module.
-==Software source code:==
+==Software source code==
 Available on the NA-MIC Sandbox - access [http://svn.na-mic.org/NAMICSandBox/trunk/Queens/PerkStationModule/ PerkStationModule]
 ==Tutorial==
 * Perk Station: [[Media:PerkStationSlicerTutorial.pdf‎|PerkStationSlicerTutorial]] <font color="red">''New''</font>
 * Perk Station tutorial dataset: [[Media:PerkStationTutorialDataset.zip|PerkStationTutorialDataset.zip]] <font color="red">''New''</font>
 * Perk Station hardware assembly instructions: coming soon...
 ==Publications==
 *Vikal, S., P. U-Thainual, J. Carrino, I. Iordachita, G. Fischer, and G. Fichtinger, "Perk Station-Percutaneous surgery training and performance measurement platform", Computerized Medical Imaging and Graphics, June 2009.
 *U-Thainual, P., G. Fischer, I. Iordachita, S. Vikal, and G. Fichtinger, "The Perk Station: Systems design for percutaneous intervention training suite", Procedings IEEE International Conference on Robotics and Biomimetics ROBIO 2009, pp. 1693–1697, 22–25 Feb, 2009.
@@ Line 59: / Line 61: @@
 *U-Thainual, P., G. Fischer, J. Carrino, G. Fichtinger, and I. Iordachita, "MR/CT Percutaneous Intervention Training Suite", 7th International Symposium on Interventional MRI, pp. 81-85, 2008.
 *U-Thainual, P., S. Vikal, I. Iordachita, and G. Fichtinger, "The Perk Station: Portable training station for percutaneous interventions", Orthopaedic Care Conference, 2008.
 ==Team==
 *PI: Gabor Fichtinger, Queen’s University (gabor at cs.queensu.ca)
 *Hardware: Paweena U-Thainual, Queen's University(paweena at cs.queensu.ca), Iulian Iordachita, Johns Hopkins University (iordachita at jhu.edu)
@@ Line 67: / Line 71: @@
 *NA-MIC Engineering Contact: Katie Hayes, MSc, Brigham and Women's Hospital (hayes at bwh.harvard.edu)
 *Host Institutes: Queen's University & Johns Hopkins University
 ==Links==
 *[[DBP2:Queens|Queens DBP 2]]

← Older revision		Revision as of 15:11, 6 April 2010
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	[[Image:Dani-PerkStation.JPG\|thumb\|400px\|Perk Station in training / demo mode.]]		[[Image:Dani-PerkStation.JPG\|thumb\|400px\|Perk Station in training / demo mode.]]
−
	<!-- [[Image:Dani-PerkStation.JPG\|thumb\|320px\|center\|Perk Station in training / demo mode.]] -->		<!-- [[Image:Dani-PerkStation.JPG\|thumb\|320px\|center\|Perk Station in training / demo mode.]] -->

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 The software enables to perform image-guided percutaneous needle biopsies. The workflow consists of four steps:
-#'''Calibration''': To register the image overlay device with patient/phantom lying on scanner table. In this stage, the software sends the image to the secondary device, in correct physical dimensions. The software enables the user to translate/rotate the image as seen through the mirror, so that it aligns with the fiducials mounted/strapped on patient/phantom to achieve registration. This fiducial alignment achieves in-plane registration. For registration in z-plane, the image projection plane should be coincident with the laser-guide plane, which is also the plane of acquisition.
+*'''Calibration''': To register the image overlay device with patient/phantom lying on scanner table. In this stage, the software sends the image to the secondary device, in correct physical dimensions. The software enables the user to translate/rotate the image as seen through the mirror, so that it aligns with the fiducials mounted/strapped on patient/phantom to achieve registration. This fiducial alignment achieves in-plane registration. For registration in z-plane, the image projection plane should be coincident with the laser-guide plane, which is also the plane of acquisition.
-#'''Planning''': In this step, the entry and target points are given by mouse-clicks. The software calculates the insertion angle w.r.t vertical and insertion depth.
-#Insertion: The software overlays the needle guide on the secondary monitor/mirror to assist the physician/user to perform the intervention. Further depth perception lines appear in gradations of 10mms to help the physician to insert the needle at correct depth.
+*'''Planning''': In this step, the entry and target points are given by mouse-clicks. The software calculates the insertion angle w.r.t vertical and insertion depth.
-#Validation: If the needle insertion is needed to be validated, the user acquires a validation image with needle inside patient/phantom. The validation volume/image is loaded to scene. The user can give the actual needle entry and end points to get error calculations.
 ==Schedule==
-:*'''08/01/2009:''' ''Current status:'' All the core functionalities are implemented in a dynamically loadable Slicer module (one does not need to modify any of the Slicer code to use this module)
+*'''08/01/2009:''' ''Current status:'' All the core functionalities are implemented in a dynamically loadable Slicer module (one does not need to modify any of the Slicer code to use this module)
-:*'''09/24/2009:''' ''Demonstration and tutorial:'' Demonstrated and provide one-on-one tutorials about the Perk Station on the MICCAI 2009 Conference (London, UK)
+*'''09/24/2009:''' ''Demonstration and tutorial:'' Demonstrated and provide one-on-one tutorials about the Perk Station on the MICCAI 2009 Conference (London, UK)
-:*'''10/30/2009:''' ''Oblique slice support:'' Support needle insertion planning in any slice orientation.
+*'''10/30/2009:''' ''Oblique slice support:'' Support needle insertion planning in any slice orientation.
-:*'''11/30/2009:''' ''Software review:'' Review the software in terms of compliance to Slicer's interactive module architecture (with engineering core members).
+*'''11/30/2009:''' ''Software review:'' Review the software in terms of compliance to Slicer's interactive module architecture (with engineering core members).
 ==Current deployment/usage:==

@@ Line 4: / Line 4: @@
 = PERK Station (Image overlay to perform/train image-guided needle interventions) =
-[[Image:CT-Image-Overlay-Zinreich.JPG|450px|thumb|Image Overlay in clinical setup]]
+[[Image:CT-Image-Overlay-Zinreich.JPG|400px|thumb|Image Overlay in clinical setup]]
 ==Objective==
@@ Line 15: / Line 15: @@
 <!-- [[Image:Dani-PerkStation.JPG|thumb|320px|center|Perk Station in training / demo mode.]] -->
-[[Image:Dani-PerkStation.JPG|thumb|320px|Perk Station in training / demo mode.]]
+[[Image:Dani-PerkStation.JPG|thumb|400px|Perk Station in training / demo mode.]]
 The software enables to perform image-guided percutaneous needle biopsies. The workflow consists of four steps: