DBP3:UCLA - Revision history

Andrei: /* Data */

2014-09-05T21:23:13Z

Data

Andrei: /* Sample Data Sets */

2014-09-05T21:22:12Z

Sample Data Sets

Andrei: /* Investigators */

2014-06-23T18:58:32Z

Investigators

Andrei: /* Links */

2014-06-23T18:57:32Z

Links

Andrei: /* Press Releases */

2014-06-23T18:56:58Z

Press Releases

Andrei: /* Press Releases */

2014-06-23T18:56:25Z

Press Releases

Andrei: /* Press Releases */

2014-06-23T18:56:04Z

Press Releases

Andrei: /* Press Releases */

2014-06-23T18:55:06Z

Press Releases

Andrei: /* Presentations and Dissemination Events */

2014-06-23T18:52:54Z

Presentations and Dissemination Events

Andrei: /* Abstracts */

2014-06-23T18:48:35Z

Abstracts

@@ Line 175: / Line 175: @@
 * 2012-Jan. CalaTK implementation of geometric metamorphosis for registration in the presence of lesion infiltration/recession released
 * 2012-Oct. Sliding organ journal article submitted to IEEE Transactions on Medical Imaging
 =Results=

← Older revision		Revision as of 21:22, 5 September 2014
Line 180:		Line 180:

	=Results=		=Results=
−
−	~~==Sample Data Sets==~~
−	[[File:ThreeSubjects.png\|200px\|thumb\|right\|Sample images from the three TBI cases]] '''IMPORTANT NOTE: Use of these data for inclusion in peer-reviewed publication is provided contingent on appropriate recognition of the following UCLA investigators as study co-authors: Andrei Irimia, Micah C Chambers, Jeffry R Alger, Paul M Vespa, John D Van Horn.'''
−	* [[File:TBI Patient1 nrrd3.zip]]
−	* [[File:TBI Patient2 nrrd2.zip]]
−	* [[File:Patient3_DTI_nrrd_files.zip]]
−	* [[File:Patient1 UCLA 3T.zip]]
−	* [[File:Patient2 UCLA 3T.zip]]
−	* [[File:Patient3 UCLA 3T.zip]]
−	* [[File:Patient3_UCLA_CT.zip]]
−	* [[File:UCLA_1_5T.zip]]
−	* [[File:UCLA_3T.zip]]

	==Sample Slicer Results==		==Sample Slicer Results==

@@ Line 313: / Line 313: @@
 USC
      * John Darrell Van Horn, M.Eng., Ph.D. - Principal Investigator of the DBP
-     * Andrei Irimia, Ph.D. (DBP engineer, postdoctoral scholar) [http://www.andrei-irimia.com]
+     * Andrei Irimia, Ph.D. - assistant professor, USC [http://www.andrei-irimia.com]
      * Arthur W. Toga, Ph.D. (investigator)
 UCLA

@@ Line 542: / Line 542: @@
 =Links=
-*[http://loni.ucla.edu UCLA Laboratory of Neuro Imaging(LONI)]
+*[http://loni.usc.edu USC Laboratory of Neuro Imaging(LONI)]
 *[http://www.ucnia.org/ Utah Center for NeuroImage Analysis]
 *[http://www.traumaticbraininjury.com/ Traumatic Brain Injury Portal]
 *[http://www.tbi-impact.org/ TBI IMPACT Mission]

@@ Line 495: / Line 495: @@
 * Ria Misra (2014) The first map showing all the connections in your brain’s white matter http://io9.com/the-first-map-showing-all-the-connections-in-your-brain-1520834855
 Also covered by the following:
-** https://realitysandwich.com/216937/the-first-map-showing-all-the-connections-in-your-brains-white-matter/
+*** https://realitysandwich.com/216937/the-first-map-showing-all-the-connections-in-your-brains-white-matter/
 * Technobahn.com (2014) How our brain works: research reveals white matter ‘scaffold’ of human brain http://www.technobahn.com/articles/2014021115410031.html;
 * Also covered by the following:
-* http://medicalxpress.com/news/2014-02-brain-networks-reveals-white-scaffold.html;
+*** http://medicalxpress.com/news/2014-02-brain-networks-reveals-white-scaffold.html;
-* http://neurosciencestuff.tumblr.com/post/76348315832/how-our-brain-networks-research-reveals-white;
+*** http://neurosciencestuff.tumblr.com/post/76348315832/how-our-brain-networks-research-reveals-white;
-* http://elbiruniblogspotcom.blogspot.com/2014/02/frontiers-systematic-network-lesioning.html; http://neurosciencenews.com/white-matter-communications-network-	neuroscience-746/; http://keatonaltom.tumblr.com/
+*** http://elbiruniblogspotcom.blogspot.com/2014/02/frontiers-systematic-network-lesioning.html; http://neurosciencenews.com/white-matter-communications-network-	neuroscience-746/; http://keatonaltom.tumblr.com/
-* http://english.farsnews.com/newstext.aspx?nn=13921123000049
+*** http://english.farsnews.com/newstext.aspx?nn=13921123000049
-* http://news.asiacollege.ir/brain-networks-white-matter-scaffold-human-brain-revealed/
+*** http://news.asiacollege.ir/brain-networks-white-matter-scaffold-human-brain-revealed/
 * Suzanne Wu (2014) Scientists create first map of brain ‘scaffold’ http://news.usc.edu/#!/article/58792/research-reveals-white-matter-scaffold-of-human-brain/
 * solociencia.com (2013) Mas luz en torno al misterioso caso de Phineas Gage [More light shed on the mysterious case of Phineas Gage, in Spanish] Accessed March 12, 2013

@@ Line 474: / Line 474: @@
 =Press Releases=
 * Graziella Marturano (2012) Svelato il mistero di Phineas Gage [The mystery of Phineas Gage unveiled] (in Italian) Featured by Controcampus (Accessed May 30, 2012)
@@ Line 505: / Line 543: @@
 * Neuroskeptic (2012) Visualizing the connected brain http://neuroskeptic.blogspot.com February 8, 2012
 * Michelle C. LaPlaca, David F. Meaney (2011) Perspectives on the role of bioengineering in neurotrauma research Journal of Neurotrauma volume 28, pages 2201-2202
 =Links=

@@ Line 416: / Line 416: @@
 ==Presentations and Dissemination Events==
 * Andrei Irimia, Micah C. Chambers, Sheng-Yang Matthew Goh, Carinna M. Torgerson, Marcel W. Prastawa, Paul M. Vespa, David A. Hovda, Jeffry R. Alger, Guido Gerig, Stephen R. Aylward, Arthur W. Toga, Ron Kikinis and John D. van Horn (2012) Large scale calculation of the connectomic and network covariance of the human brain (N = 110) Poster Session of the National Alliance for Medical Image Computing, National Institute of Biomedical Imaging and Bioengineering, November 7-9, 2012, Bethesda, Maryland, USA
 * Micah C. Chambers, Andrei Irimia, Lori L. Altshuler and John D. van Horn (2012) Structural and functional connectivity representation in euthymic bipolar disorder via connectogram representations Neuroscience Poster Session, Brain Research Institute, Ackerman Student Union Grand Ballroom, University of California, Los Angeles, December 4, 2012, Los Angeles, California, USA

@@ Line 402: / Line 402: @@
 * Andrei Irimia, Micah C. Chambers, Marcel W. Prastawa, Paul M. Vespa, David A. Hovda, Jeffry R. Alger, Guido Gerig, Stephen R. Aylward, Arthur W. Toga, Ron Kikinis and John D. van Horn (2012) Systematic connectomic analysis of white matter atrophy associated with severe traumatic brain injury Proceedings of the Thirtieth Neurotrauma Symposium, July 22-25, 2012, Arizona Biltmore Resort and Spa, Phoenix, Arizona, USA. Also published in Journal of Neurotrauma, volume 29, pages A8-A9.
 *Andrei Irimia, John D. van Horn, Micah C. Chambers, Marcel W. Prastawa, Silvain Gouttard, Paul M. Vespa, David A. Hovda, Jeffry R. Algers, Sonia M. A. Pujol, Guido Gerig, Stephen R. Aylward, Arthur W. Toga and Ron Kikinis (2011) Connectome-level evaluation of neurodegeneration caused by traumatic brain injury Proceedings of the Eighteenth Annual Meeting of the Organization on Human Brain Mapping (OHBM 2012), June 10-14, 2012, Beijing, China
 * Micah C. Chambers, Andrei Irimia and John D. van Horn (2012) Combined functional and structural connectivity for an improved look at the brain Proceedings of the Nineteenth Joint Symposium on Neural Computation, June 2, 2012, University of California, Riverside, California, USA
 * Andrei Irimia, S. Y. Matthew Goh, Carinna M. Torgerson, Micah C. Chambers, David A. Hovda, Jeffry R. Alger, Paul M. Vespa, Guido Gerig, Arthur W. Toga, Ron Kikinis and John D. van Horn (2012) Impact of neurotrauma upon the network architecture and information processing capabilities of the human cortex Proceedings of the Nineteenth Joint Symposium on Neural Computation, June 2, 2012, University of California, Riverside, California, USA