https://www.na-mic.org/w/index.php?action=history&feed=atom&title=Engineering%3ACore_3_Programming_Week 2026-05-26T23:05:43Z Revision history for this page on the wiki MediaWiki 1.33.0 https://www.na-mic.org/w/index.php?title=Engineering:Core_3_Programming_Week&diff=4245&oldid=prev 2006-12-18T13:39:03Z

<p>Update from Wiki</p> <p><b>New page</b></p><div>'''Location: 1249 Boylston St, Boston, MA''' [http://splweb.bwh.harvard.edu:8000/pages/directions/1249Boylston/Boylston-facility.html directions]<br /> <br /> = Monday September 26th: Engineering and DBP Discussion =<br /> <br /> [[Engineering:Sept262005|Highlights]]<br /> <br /> Goal: Core 3 to give feedback on how they are using the NAMIC Kit in their daily work.<br /> <br /> * noon-1pm: Meet and greet<br /> * 1-2:15pm Feedback from UCI on NAMIC Kit [[Media:26sep2005.ppt|ppt presentation]]<br /> * 2:15-3:30pm Feedback from Dartmouth on NAMIC Kit [[Media:DARTMOUTH.ppt|ppt presentation]]<br /> * 3:30-3:50pm break<br /> * 3:50-5:00pm Discussion of features required going forward, Conclusion<br /> * Dinner<br /> <br /> = Tuesday September 27th Engineering Discussion =<br /> <br /> == 9am-noon: Slicer 3.0 Architecure decision making ==<br /> <br /> * Agenda Creation<br /> <br /> * Summarize Goals of Slicer 3<br /> ** Serve as Application for Core 3 users of Core 1 Algorithms implemented in ITK<br /> ** Enforce Modularity<br /> ** Broader Development Base (interoperate with different languages, GUI toolkits)<br /> <br /> * Technology Discussions<br /> ** Slicer Protocol (Steve)<br /> ** MRML / Coordinate / Publish and Subscribe (Mike)<br /> ** KWWidgets / Widgets / VolView Update (Will)<br /> <br /> &lt;br /&gt;<br /> <br /> * Implementation Issues<br /> ** Wrapping ITK Algorithms as Modules<br /> *** Filter Watcher, Build as Standalone Executable or Linked Library<br /> ** UI Definition (GUI and CLI)<br /> *** Command line introspection<br /> *** Progress reporting<br /> ** Process Control (Abort, Sync/Async)<br /> ** Communication<br /> *** Serialization of the Scene, Semantics, Coordinate Systems<br /> *** RPC-like back and forth exchanges (what capabilities are provided by Slicer Base?)<br /> ** Provenance<br /> ** Exporting Scene description to text and binary files<br /> <br /> &lt;br /&gt;<br /> <br /> * Timelines and Action Items<br /> <br /> * ** By All Hands Meeting<br /> *** ITK I/O Factory communicating over sockets to slicer 2.x (Steve, Alex)<br /> **** Example executable-based modules:<br /> ***** Smooth and image<br /> ***** Segmentation<br /> ***** Registration<br /> *** TCLAP based XML version of help/interface (Dan, Jim)<br /> <br /> &lt;br /&gt;<br /> <br /> * ** At All Hands Meeting<br /> <br /> == 1-2pm ==<br /> <br /> fMRI in slicer review (Wendy, Haiying, Bill, Will, Jim, Steve, Sandy) Background discussion before Polina and Wanmei arrive.<br /> <br /> == 2-5pm: fMRI statistics ==<br /> <br /> Bill, Jim, Will, Sandy, Steve, Wendy, Carsten, Haiying, Polina, Wanmei<br /> <br /> * ** *** Current VTK (EMSegmenter) and Matlab (Eric Cosman, Wanmei) based implementations<br /> *** Migration to ITK and/or improved VTK methods<br /> **** Discuss existing and planned MRF infrastructure [[http://public.kitware.com/pipermail/insight-users/2005-May/013429.html see this discussion on the ITK mailing list]]<br /> ***** ICM based filters in current ITK<br /> ***** Need: MF, Min-Cut/Max-Flow<br /> **** Review existing MI infrastructure and discuss its applicability to activation detection<br /> **** Migrating GLM from GSL to VNL (vtkITK wrapper)<br /> *** Estimates of amount of effort, action items<br /> <br /> = Wednesday September 28th Engineering Discussion =<br /> <br /> * 9:15-10:15 Misc:<br /> ** MICCAI Workshop talk (NAMIC Kit: Jim 30 min, NAMIC Overview: Ron 10 min, Slicer: Steve 20 min)<br /> ** BugTracker<br /> ** NIH Forge<br /> * 10:30-noon non-linear ITK registration, widgets</div>

Andy