Engineering:GE - Revision history

Grundlett: Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

2017-07-10T17:11:02Z

Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

Marianna at 22:02, 3 June 2014

2014-06-03T22:02:34Z

Millerjv: /* Personal Slicer Cloud */

2012-11-16T17:48:59Z

Personal Slicer Cloud

Millerjv: /* Personal Slicer Cloud */

2012-11-16T16:39:44Z

Personal Slicer Cloud

Millerjv: /* GE Research Projects */

2012-11-16T16:39:10Z

GE Research Projects

Millerjv: /* Interactive methods */

2012-11-16T16:28:58Z

Interactive methods

Millerjv: /* 3D Slicer Plugin Architecture */

2012-11-16T16:26:55Z

3D Slicer Plugin Architecture

Millerjv: /* 3D Slicer Plugin Architecture */

2012-11-16T16:25:10Z

3D Slicer Plugin Architecture

Millerjv: /* Quantitative methods */

2012-11-16T16:20:18Z

Quantitative methods

Millerjv: /* GE Research Projects */

2012-11-16T16:11:07Z

GE Research Projects

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 efforts of the NA-MIC community and the [http://www.nbirn.net BIRN],
 [http://nac.spl.harvard.edu NAC], [http://www.ncigt.org NCIGT], and
-other cooperative grants that leverage the common infrastructure. GE Research has created a simple plugin architecture that allows researchers to extend Slicer's capabilities with plugins provided as executables, shared libraries, or python modules. See [http://www.slicer.org/slicerWiki/index.php/Slicer3:Execution_Model_Documentation here] for more information. We have recently extended the execution model to include measurements either through [[2010 Winter Project Week Command Line Module Simple Return Types|Simple Return Parameters]] or tables of measurements in CSV (Comma Separated Value) files.  Plugins can be built outside of the Slicer build tree and distributed as [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/SlicerApplication/ExtensionsManager Slicer Extensions].  Slicer plugins can shared with other applications, e.g. NiftyView and GIMIAS. See [[Media:AHM2010-Plug-ins.ppt|here]] and
+other cooperative grants that leverage the common infrastructure. GE Research has created a simple plugin architecture that allows researchers to extend Slicer's capabilities with plugins provided as executables, shared libraries, or python modules. See [https://www.slicer.org/wiki/Slicer3:Execution_Model_Documentation here] for more information. We have recently extended the execution model to include measurements either through [[2010 Winter Project Week Command Line Module Simple Return Types|Simple Return Parameters]] or tables of measurements in CSV (Comma Separated Value) files.  Plugins can be built outside of the Slicer build tree and distributed as [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/SlicerApplication/ExtensionsManager Slicer Extensions].  Slicer plugins can shared with other applications, e.g. NiftyView and GIMIAS. See [[Media:AHM2010-Plug-ins.ppt|here]] and
 [http://www.nitrc.org/projects/slicer3examples/ here] for more information on interfacing with the 3D Slicer.
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 == Radiological Review Modes ==
-Clinical researchers expect image review workstations to provide a set of basic functionality. Handling DICOM as a source of image data is one example.  Other examples include image multiplanar and oblique reformat, lightbox, comparisons, tracked cursors, ROI's, cine, and calipers for measurement. In conjunction with funding from [http://nac.spl.harvard.edu/ NAC], GE Research is providing some of these base capabilities to the 3D Slicer. [http://www.slicer.org/slicerWiki/index.php/Slicer3:RadiologicalReview More...]
+Clinical researchers expect image review workstations to provide a set of basic functionality. Handling DICOM as a source of image data is one example.  Other examples include image multiplanar and oblique reformat, lightbox, comparisons, tracked cursors, ROI's, cine, and calipers for measurement. In conjunction with funding from [http://nac.spl.harvard.edu/ NAC], GE Research is providing some of these base capabilities to the 3D Slicer. [https://www.slicer.org/wiki/Slicer3:RadiologicalReview More...]
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 == Charting ==
-Quantitative imaging and longitudinal methods use charts to summarize and compare information between images. GE Research is building a charting infrastructure in the 3D Slicer which treats charts as a fundamental display component, akin to images and the 3D view. Charts can be packed in a layout with image viewers and 3D viewers, controlled directly from modules, constructed and modified interactively, serialized with the MRML scene, and emit signals to the application [http://www.slicer.org/slicerWiki/index.php/Documentation/4.2/Developers/Charts More...]
+Quantitative imaging and longitudinal methods use charts to summarize and compare information between images. GE Research is building a charting infrastructure in the 3D Slicer which treats charts as a fundamental display component, akin to images and the 3D view. Charts can be packed in a layout with image viewers and 3D viewers, controlled directly from modules, constructed and modified interactively, serialized with the MRML scene, and emit signals to the application [https://www.slicer.org/wiki/Documentation/4.2/Developers/Charts More...]
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@@ Line 64: / Line 64: @@
 == Interactive methods ==
-Interactive methods for segmentation and registration allow users of the 3D Slicer to label and align images through the users interactions for circumstances where automated methods are not practical, are not feasible, or are not necessary. GE Research has developed an architecture within the Editor module to support interactive segmentation, with a first embodiment being an implementation of the GrowCut method.  This architecture provides semi-automated segmentation which allows the user to iterate and modify the segmentation. Current efforts include extending interactive methods to registration. [http://www.slicer.org/slicerWiki/index.php/Modules:GrowCutSegmentation-Documentation-3.6 More...]
+Interactive methods for segmentation and registration allow users of the 3D Slicer to label and align images through the users interactions for circumstances where automated methods are not practical, are not feasible, or are not necessary. GE Research has developed an architecture within the Editor module to support interactive segmentation, with a first embodiment being an implementation of the GrowCut method.  This architecture provides semi-automated segmentation which allows the user to iterate and modify the segmentation. Current efforts include extending interactive methods to registration. [https://www.slicer.org/wiki/Modules:GrowCutSegmentation-Documentation-3.6 More...]
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← Older revision		Revision as of 22:02, 3 June 2014
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		+	__NOTOC__
	Back to [[Engineering:Main\|NA-MIC Engineering]]		Back to [[Engineering:Main\|NA-MIC Engineering]]
	= Overview (PI: Jim Miller) =		= Overview (PI: Jim Miller) =

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 == Personal Slicer Cloud ==
-Leveraging the infrastructure of the 3D Slicer Plugin Architecture and the Remote IO mechanisms of Slicer, GE Research is developing a Personal Slicer Cloud. Personal Slicer Cloud allows a client machine to be paired with a server, allowing a user to schedule long running analyses on their server machine for later review on their client machine.  Here, the user will interact with the plugin on the client version of Slicer as they would normally but direct the module to run on the cloud instead of locally. The client version of Slicer will automatically package all the data and parameters necessary and submit to the user's Personal Slicer Cloud.  A separate module on the client will allow the user to monitor the progress and download results back to the client. One use case would be to set up a module on your laptop, submit to your Personal Slicer Cloud, pack up your laptop for the drive home, and upon arriving at your destination open your laptop to download and review the results computed while you were in transit.
+Leveraging the infrastructure of the 3D Slicer Plugin Architecture and the Remote IO mechanisms of Slicer, GE Research is developing a Personal Slicer Cloud. Personal Slicer Cloud allows a client machine to be paired with a server, allowing a user to schedule long running analyses on their server machine from their client machine for later review on their client machine.  Here, the user will interact with the plugin on the client version of Slicer as they would normally but direct the module to run on the cloud instead of locally. The client version of Slicer will automatically package all the data and parameters necessary and submit to the user's Personal Slicer Cloud.  A separate module on the client will allow the user to monitor the progress and download results back to the client. One use case would be to set up a module on your laptop, submit to your Personal Slicer Cloud, pack up your laptop for the drive home, and upon arriving at your destination open your laptop to download and review the results computed while you were in transit.
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 == Personal Slicer Cloud ==
-Leveraging the infrastructure of the 3D Slicer Plugin Architecture, GE Research is developing a Personal Slicer Cloud. Personal Slicer Cloud allows a client machine to be paired with a server, allowing a user to schedule long running analyses on their server machine for later review on their client machine.  Here, the user will interact with the plugin on the client version of Slicer as they would normally but direct the module to run on the cloud instead of locally. The client version of Slicer will automatically package all the data and parameters necessary and submit to the user's Personal Slicer Cloud.  A separate module on the client will allow the user to monitor the progress and download results back to the client. One use case would be to set up a module on your laptop, submit to your Personal Slicer Cloud, pack up your laptop for the drive home, and upon arriving at your destination open your laptop to download and review the results computed while you were in transit.
+Leveraging the infrastructure of the 3D Slicer Plugin Architecture and the Remote IO mechanisms of Slicer, GE Research is developing a Personal Slicer Cloud. Personal Slicer Cloud allows a client machine to be paired with a server, allowing a user to schedule long running analyses on their server machine for later review on their client machine.  Here, the user will interact with the plugin on the client version of Slicer as they would normally but direct the module to run on the cloud instead of locally. The client version of Slicer will automatically package all the data and parameters necessary and submit to the user's Personal Slicer Cloud.  A separate module on the client will allow the user to monitor the progress and download results back to the client. One use case would be to set up a module on your laptop, submit to your Personal Slicer Cloud, pack up your laptop for the drive home, and upon arriving at your destination open your laptop to download and review the results computed while you were in transit.
 |-

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 other cooperative grants that leverage the common infrastructure. GE Research has created a simple plugin architecture that allows researchers to extend Slicer's capabilities with plugins provided as executables, shared libraries, or python modules. See [http://www.slicer.org/slicerWiki/index.php/Slicer3:Execution_Model_Documentation here] for more information. We have recently extended the execution model to include measurements either through [[2010 Winter Project Week Command Line Module Simple Return Types|Simple Return Parameters]] or tables of measurements in CSV (Comma Separated Value) files.  Plugins can be built outside of the Slicer build tree and distributed as [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/SlicerApplication/ExtensionsManager Slicer Extensions].  Slicer plugins can shared with other applications, e.g. NiftyView and GIMIAS. See [[Media:AHM2010-Plug-ins.ppt|here]] and
 [http://www.nitrc.org/projects/slicer3examples/ here] for more information on interfacing with the 3D Slicer.
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 == Quantitative methods ==
-Transitioning U01
+Pharmacokenetic Modeling (Pk Modeling) transforms Dynamic Contrast Enhance MRI (DCE MRI) imaging into quantitative measures of function. GE Research is working on a Slicer Extension and enabling Slicer architecture to support the Pk analysis of DCE MRI.
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-|align="center" | [[Image:PkModeling.png|150px|]]
+|align="center" | [[Image:PkModeling.png|75px|]]
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