Events: DTI Tractography Challenge MICCAI 2011 - Revision history

Spujol: /* Post Workshop */

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Information inserted after the workshop

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 ==Post Workshop==
-For the on-going work and outcomes of the MICCAI 2011 workshop, please see the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page] and [[media:DTI_Tractography_Challenge_Proceedings_MICCAI2011.pdf‎ |workshop proceedings]]
+For the on-going work and outcomes of the MICCAI 2011 workshop, please see the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page] and [[media:DTIChallenge2011_Proceedings.pdf |workshop proceedings]]
 <gallery widths=300px heights=300px perrow=3 caption="Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas">

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 ==Suggested background reading==
 *MRI Atlas of Human White Matter. S. Mori, S. Wakana, P.C.M. van Zijl, L.M. Nagae-Poetscher. Elsevier Science, 2005
 *Diffusion MRI: Theory, Methods, and Applications. Edited by Derek K. Jones. Oxford University Press, 2011.
+==Post Workshop==
-==Information inserted after the workshop==
+For the on-going work and outcomes of the MICCAI 2011 workshop, please see the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page] and [[media:DTI_Tractography_Challenge_Proceedings_MICCAI2011.pdf‎ |workshop proceedings]]
 <gallery widths=300px heights=300px perrow=3 caption="Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas">

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 ==Information inserted after the workshop==
-For the on-going work and outcomes of the MICCAI 2011 workshop, please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ]
+For the on-going work and outcomes of the MICCAI 2011 workshop, please see the [[media:DTI_Tractography_Challenge_Proceedings_MICCAI2011.pdf‎ | workshop proceedings]] and visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ]
 <gallery widths=300px heights=300px perrow=3 caption="Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas">

@@ Line 99: / Line 99: @@
 ==Information inserted after the workshop==
 For the on-going work and outcomes of the MICCAI 2011 workshop, please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ]
-[[media:DTI_Tractography_Challenge_Proceedings_MICCAI2011.pdf‎ | Proceedings]]
 <gallery widths=300px heights=300px perrow=3 caption="Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas">
 image:CST-SPL-PNL-Atlas-2008-Issue.png|CST and surrounding structures: Putamen blue, caudate nucleus in brown, lateral ventricles in green

@@ Line 98: / Line 98: @@
 ==Information inserted after the workshop==
-For the on-going work and outcomes of the MICCAI 2011 workshop, please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ] (under construction)
+For the on-going work and outcomes of the MICCAI 2011 workshop, please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ]
+[[media:DTI_Tractography_Challenge_Proceedings_MICCAI2011.pdf‎ | Proceedings]]
 <gallery widths=300px heights=300px perrow=3 caption="Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas">
 image:CST-SPL-PNL-Atlas-2008-Issue.png|CST and surrounding structures: Putamen blue, caudate nucleus in brown, lateral ventricles in green

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 *The qualitative assessment of tract reconstruction in each hemisphere, for patients and controls, will be based on 1) anatomical correctness of the tract, 2) presence of false-positive tracts, 3) presence of false-negative tracts.
 *The qualitative assessment of the depiction of the spatial relation between the tumor and the tract will be based on: 1) correct depiction of the distance between the tract and the lesion, 2) demonstration of tract displacement, and 3) demonstration of tumor infiltration.
-*The quantitative evaluation of tract reconstruction in each hemisphere, for patients and controls, will be performed using five metrics : 1) Dice's coefficient for volumetric overlap, 2) Closest point distance between bundles, 3) Fiber profiles on Fractional Anisotropy (FA), 4) Fiber profiles of Mean Diffusivity (MD), 5) STAPLE sensitivity and specificity score.
+*The quantitative evaluation of tract reconstruction in each hemisphere, for patients and controls, will be performed using five metrics : 1) Dice's coefficient for volumetric overlap, 2) Closest point distance between bundles (Hausdorff distance), 3) Fiber profiles on Fractional Anisotropy (FA), 4) Fiber profiles of Mean Diffusivity (MD), 5) STAPLE sensitivity and specificity score.
 ==Suggested background reading==

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 *Sylvain Gouttard, M.Sc.,The Scientific Computing and Imaging Institute, University of Utah
 *Arya Nabavi, M.D., Department of Neurosurgery, University Hospital Schleswig-Holstein, Kiel, Germany
 ==Tentative Agenda==

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 ==Information inserted after the workshop==
-F'''or the on-going work and outcomes of the MICCAI 2011 workshop, please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ]'''
+'''For the on-going work and outcomes of the MICCAI 2011 workshop, please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge post-workshop page ]'''
 <gallery widths=300px heights=300px perrow=3 caption="Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas">