July31T-con - Revision history

Melonakos at 22:26, 10 September 2007

2007-09-10T22:26:26Z

2007-08-09T17:49:20Z

2007-08-09T17:48:35Z

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 '''In attendence''' (add your name if you were there but I didn't note it below):
-Guido Gerig, Ron Kikinis, Casey Goodlett, Randy Gollub, Ross Whitaker, Dennis Jen, Lauren O'Donnell, Karl Helmer, Vince Magnotta, John Melanakos, CF Westin, Tri Ngo, Doug Markant, Sonia Pujol
+Guido Gerig, Ron Kikinis, Casey Goodlett, Randy Gollub, Ross Whitaker, Dennis Jen, Lauren O'Donnell, Karl Helmer, Vince Magnotta, John Melonakos, CF Westin, Tri Ngo, Doug Markant, Sonia Pujol
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-There has been much more dialogue since the July 31 T-con regarding the image data format.  A proposed final recommendation (garnered from discussion and vetted by Guido and CF), a detailed list of new information and action items along with a synopsis of the email discussion as complied by Randy is posted on this wiki page [[July31T-con/Synopsis | email discussion, summarized key points and final recommendation ]].  A very nice piece of image analysis detective work that helped clarify the issues was done by Marc Neihammer and CF and is posted here  [[July31T-con/PlayingWithTheDiffusionData | Some data exploration ]].
+There has been much more dialogue since the July 31 T-con regarding the image data format.  A proposed final recommendation (garnered from discussion and vetted by Guido and CF), a detailed list of new information and action items along with a synopsis of the email discussion as complied by Randy is posted on this wiki page [[July31T-con/Synopsis | email discussion, summarized key points and final recommendation ]].  A very nice piece of image analysis detective work that helped clarify the issues was done by Marc Niethammer and CF and is posted here  [[July31T-con/PlayingWithTheDiffusionData | Some data exploration ]].
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-# Data format issues: Synopsis of [[July31T-con/Synopsis | email discussion, summarized key points and final recommendation ]]; [[July31T-con/PlayingWithTheDiffusionData | Some data exploration ]]
+There has been much more dialogue since the July 31 T-con regarding the image data format.  A proposed final recommendation (garnered from discussion and vetted by Guido and CF), a detailed list of new information and action items along with a synopsis of the email discussion as complied by Randy is posted on this wiki page [[July31T-con/Synopsis | email discussion, summarized key points and final recommendation ]].  A very nice piece of image analysis detective work that helped clarify the issues was done by Marc Neihammer and CF and is posted here  [[July31T-con/PlayingWithTheDiffusionData | Some data exploration ]].
 ## Voxel resolution: non-isotropic native resolution vs. upsampling vs. downsampling (to be discussed and decided on common preprocessing)
 ### Native grid size is 144x144x81 [FOV: 240mm] with voxel size 1.667x1.667x1.7

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 *Ron/Ross suggested that this Conference be a "dry run" for a future MICCAI session on this same topic.
 *Another question to be considered at the meeting is whether this particular dataset is the optimal one to use for this work.  Probably we are fine for Sante Fe, but going forward, should we consider a dataset that was collected with a isotropic voxels and other considerations raised during our discussion?
- <br>
+<br>
 '''Follow up:'''   <br>
-*Marek provided details about the clinical relevance of the 5 chosen tracks to the study of schizophrenia, the information is entered on the [[Projects/Diffusion/2007_Project_Week_Contrasting_Tractography_Measures/ROI_Definitions | ROI Definition]] page and on these [[Image:Comparison_project.ppt]] slides.
+*Marek provided details about the clinical relevance of the 5 chosen tracks to the study of schizophrenia, the information is entered on the [[Projects/Diffusion/2007_Project_Week_Contrasting_Tractography_Measures/ROI_Definitions | ROI Definition]] page and on these [[Media:Comparison_project.ppt| slides]].
 Return to [[Projects/Diffusion/2007_Project_Week_Contrasting_Tractography_Measures | Contrasting Tractography Project Page]]  <br>
 Return to [[SanteFe.Tractography.Conference | SanteFe Tractography Conference Page]]

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-# Data format issues: Synopsis of [[July31T-con/Synopsis | email discussion ]]; [[July31T-con/PlayingWithTheDiffusionData | Some data exploration ]]
+# Data format issues: Synopsis of [[July31T-con/Synopsis | email discussion, summarized key points and final recommendation ]]; [[July31T-con/PlayingWithTheDiffusionData | Some data exploration ]]
 ## Voxel resolution: non-isotropic native resolution vs. upsampling vs. downsampling (to be discussed and decided on common preprocessing)
 ### Native grid size is 144x144x81 [FOV: 240mm] with voxel size 1.667x1.667x1.7