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Mbirn: TECHNOLOGY DEVELOPMENTS - Revision history
2026-05-07T10:12:20Z
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Andy: Update from Wiki
2006-12-18T13:18:43Z
<p>Update from Wiki</p>
<p><b>New page</b></p><div>{| cellpadding="5" align="left"<br />
! style="background: #efefef" | '''Core 1: MRI Calibration'''<br />
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* ''Structural MRI Calibration''<br />
** [[Reproducibility_of_T1-based_multispectral_data_%26_derived_morphometry|Reproducibility of T1-based multispectral data & derived morphometry]] (A. Dale, J. Jovicich)<br />
** [[Reproducibility_of_T2-based_multispectral_data_%26_derived_morphometry|Reproducibility of T2-based multispectral data & derived morphometry]] (J. MacFall, G. Gerig)<br />
** [[Mbirn:_Calibration_Code_developments|Mbirn: Calibration Code developments]] (S. Mori, A. Dale, J. Jovicich)<br />
* ''Diffusion MRI Calibration''<br />
** [[Mbirn:_DTI_Calibration_Studies|Mbirn: DTI Calibration Studies]] (S. Mori)<br />
** [[Mbirn:_DTI_distortion_correction_%28EPI-based%29|Mbirn: DTI distortion correction (EPI-based)]] (A. Song)<br />
** [[Mbirn:_DTI_distortion_correction_%28post-acquisition%29|Mbirn: DTI distortion correction (post-acquisition)]] (S. Mori)<br />
* '''Target deliverables for Oct 2005:'''<br />
** Multi-site calibration results: manuscript on image intensity reproducibility & unwarping effects (should hopefully be in press), manuscript on morphometry reproducibility (should be submitted)<br />
** Gradient Unwarping: distribution of correction code<br />
** B1 inhomogeneity correction: manuscript (should be submitted), acquisition recommendation and code distribution<br />
** B0 distortion correction (no phase map): manuscript (should be submitted)<br />
** B0 distortion correction (with phase map): manuscript (should be in press), distribution of code, distribution of acquisition recommendations for GE and Siemens platforms<br />
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{| cellpadding="5" align="left"<br />
! style="background: #efefef" | '''Core 2: Analysis, Visualization and Interpretation Tools'''<br />
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* [[Mbirn:_Segmentation_Tools|Mbirn: Segmentation Tools]]<br />
* [[Mbirn:_LDDMM|Mbirn: Shape Analysis Tools]]<br />
* [[Mbirn:_MRI_Diffusion_Tools|Mbirn: MRI Diffusion Tools]]<br />
* [[Mbirn:_Visualization_Tools|Mbirn: Visualization Tools]]<br />
* [[Mbirn:_Query_Atlas|Mbirn: Query Atlas]]<br />
* [[Mbirn:_Machine_Learning_Tools|Mbirn: Machine Learning Tools]]<br />
* '''Target deliverables for Oct 2005:'''<br />
** Tensor-based white matter registration tests for VETSA<br />
** Structural white matter registration tests for BELL<br />
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{| cellpadding="5" align="left"<br />
! style="background: #efefef" | '''Core 3: Computational Informatics'''<br />
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* '''Informatics'''<br />
** [[Mbirn:_XNAT|Mbirn: XNAT]]<br />
** [[Mbirn:_HID|Mbirn: HID]]<br />
** [[Mbirn:_LONI-DB|Mbirn: LONI-DB]]<br />
** [[Mbirn:_Database_Interoperations|Mbirn: Database Interoperations]]<br />
* [[Mbirn:_Ontology|Mbirn: Ontology]]<br />
* [[Mbirn:_Semantic_Web|Mbirn: Semantic Web]]<br />
* [[Mbirn:_Data_provenance|Mbirn: Data provenance]]<br />
* [[Mbirn:_Public_Data|Mbirn: Public Data]]<br />
* [[Mbirn:_Processing_Workflows|Mbirn: Processing Workflows]]<br />
* '''Target deliverables for Oct 2005:'''<br />
** XNAT at 3 sites<br />
** HID at 11 sites<br />
** Inter HID 'mediated' queries<br />
** HID-XNAT 'mediated' queries<br />
** Provenance-related queries in HID and XNAT<br />
** Public data of 10 AD and ~300 WashU images.<br />
** Workflow implementation plan.<br />
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Andy