Meningioma growth modeling with TumorSim - Revision history

Fedorov: /* tumorsim1.1.rc4 experiments */

2009-10-05T13:42:54Z

tumorsim1.1.rc4 experiments

2009-10-05T13:39:38Z

tumorsim1.1.rc4 experiments

2009-10-04T18:25:12Z

tumorsim1.1.rc4 experiments

2009-10-02T15:37:57Z

tumorsim1.1rc2 experiments

2009-10-02T15:31:38Z

Standing questions/items

2009-10-02T15:30:55Z

tumorsim1.1.rc4 experiments

2009-10-02T15:25:04Z

tumorsim1.1rc2 experiments

2009-10-02T15:21:29Z

Standing questions/items

2009-10-02T15:18:17Z

tumorsim1.1.rc4 experiments

2009-10-02T15:15:17Z

tumorsim1.1.rc4 experiments

@@ Line 90: / Line 90: @@
 {|
 |<gallery perrow="3" heights="300px" widths="400px">
-Image:ts_rc4_p0.5.jpg|Poisson 0.5
+Image:ts_rc4_p0.5.jpg|'''Poisson 0.5'''
-Image:ts_rc4_p0.49.jpg|Poisson 0.49
+Image:ts_rc4_p0.49.jpg|'''Poisson 0.49'''
-Image:ts_rc4_p0.45.jpg|Poisson 0.45
+Image:ts_rc4_p0.45.jpg|'''Poisson 0.45'''
 </gallery>
 |}

@@ Line 85: / Line 85: @@
 Image:ts_rc4_p0.2_prob.jpg
 Image:ts_rc4_p0.2_gad.jpg
 </gallery>
 |}

@@ Line 16: / Line 16: @@
 {|
 |All the following experiments are based on the "thin dura" input labels, and the tumor seed image shown on the right. The tumor label is shown in green color. Note that the tumor is touching the gray matter label.
 |<gallery perrow="3" heights="300px" widths="400px">
 Image:tumor_seed3.jpg

@@ Line 2: / Line 2: @@
 =tumorsim1.1rc2 experiments=
 '''NOTE: red outlines the boundary of the label corresponding to the initial tumor seed!'''
 <flash>file=Seed_1_simulation.swf|width=500|height=400|quality=best</flash>
+|Seed 3 (ventricle)
 <flash>file=Seed_3_simulation.swf|width=500|height=400|quality=best</flash>
 =tumorsim1.1.rc4 experiments=

← Older revision		Revision as of 15:31, 2 October 2009
Line 91:		Line 91:
	* limited tumor growth/surrounding brain deformation with 10 iterations -- try more iterations?		* limited tumor growth/surrounding brain deformation with 10 iterations -- try more iterations?
	* reduction of Poisson ratio makes results very unrealistic		* reduction of Poisson ratio makes results very unrealistic
		+	* rerun the previous version of tumorsim, which seemed to show nice more realistic deformation of the brain tissue (with Poisson=0.5)

@@ Line 67: / Line 67: @@
 Image:ts_rc4_p0.5_gad.jpg
 </gallery>
 |}

@@ Line 87: / Line 87: @@
 = Standing questions/items =
-* limited tumor growth/surrounding brain deformation with 10 iterations -- try more iterations
+* limited tumor growth/surrounding brain deformation with 10 iterations -- try more iterations?
 * reduction of Poisson ratio makes results very unrealistic

@@ Line 60: / Line 60: @@
 {|
-|'''Poisson ratio 0.5''' (initial value)
+|'''Poisson ratio 0.5'''
 |<gallery perrow="3" heights="300px" widths="400px">
 Image:ts_rc4_p0.5_prob.jpg

@@ Line 16: / Line 16: @@
 {|
-|All the following experiments are based on the "thin dura" input labels, and the tumor seed image shown on the right. The tumor label is shown in green color.
+|All the following experiments are based on the "thin dura" input labels, and the tumor seed image shown on the right. The tumor label is shown in green color. Note that the tumor is touching the gray matter label.
 |<gallery perrow="3" heights="300px" widths="400px">
 Image:tumor_seed3.jpg
@@ Line 23: / Line 23: @@
 |}
-The following screenshots capture the same slice of the following images in order: (1) image containing the tumor probabilities, and (2) the simulated Gad enhanced image.
+Also, all of the experiments use the following configuration file, where '''POISSON''' value is substituted with 0.5, 0.4, and 0.2, with the simulation results shown below.
 {|
@@ Line 34: / Line 68: @@
 {|
-|'''Poisson ratio 0.4''' (initial value)
+|'''Poisson ratio 0.4'''
 |<gallery perrow="3" heights="300px" widths="400px">
 Image:ts_rc4_p0.4_prob.jpg
@@ Line 42: / Line 76: @@
 {|
-|'''Poisson ratio 0.2''' (initial value)
+|'''Poisson ratio 0.2'''
 |<gallery perrow="3" heights="300px" widths="400px">
 Image:ts_rc4_p0.2_prob.jpg
@@ Line 48: / Line 82: @@
 </gallery>
 |}