https://www.na-mic.org/w/index.php?action=history&feed=atom&title=Mount_Sinai_Hospital_Workshop 2026-04-20T04:50:07Z Revision history for this page on the wiki MediaWiki 1.33.0 https://www.na-mic.org/w/index.php?title=Mount_Sinai_Hospital_Workshop&diff=92438&oldid=prev 2016-04-21T01:08:56Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 01:08, 21 April 2016</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l19" >Line 19:</td> <td colspan="2" class="diff-lineno">Line 19:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=Tentative Agenda=</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=Tentative Agenda=</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*9:30-9:40 am Welcome and Goals of the Workshop (Allen Tannenbaum)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*9:30-9:40 am Welcome and Goals of the Workshop (Allen Tannenbaum)</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*9:40-10:00 am Introduction to the 3D Slicer software and community <del class="diffchange diffchange-inline">(</del>Sonia Pujol<del class="diffchange diffchange-inline">)</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*9:40-10:00 am <ins class="diffchange diffchange-inline">[[media:3DSlicer_2016_SoniaPujol.pdf | </ins>Introduction to the 3D Slicer software and community <ins class="diffchange diffchange-inline">]] </ins>Sonia Pujol</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*10:00-11:00 am  Hands-on session 1: 3D Data Loading and Visualization (Sonia Pujol)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*10:00-11:00 am  <ins class="diffchange diffchange-inline">[[media:3DDataLoadingandVisualization_Slicer4.5_SoniaPujol.pdf| </ins>Hands-on session 1: 3D Data Loading and Visualization<ins class="diffchange diffchange-inline">]] </ins>(Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*11:00-11:15 am Coffee Break</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*11:00-11:15 am Coffee Break</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*11:15-11:45 am Hands on session 2: Diffusion Tensor Imaging (Sonia Pujol)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*11:15-11:45 am <ins class="diffchange diffchange-inline">[[media: DiffusionMRIanalysisTutorial_Slicer4.5_SoniaPujol.pdf | </ins>Hands<ins class="diffchange diffchange-inline">-</ins>on session 2: <ins class="diffchange diffchange-inline"> An Introduction to </ins>Diffusion Tensor Imaging<ins class="diffchange diffchange-inline">]]  </ins>(Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*11:45-12:20 pm Hands-on session 3: Brain Mapping for Neurosurgery (Sonia Pujol)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*11:45-12:20 pm <ins class="diffchange diffchange-inline">[[media:WhiteMatterExplorationTutorial_Spujol_Slicer4.5.pdf | </ins>Hands-on session 3: Brain Mapping for Neurosurgery<ins class="diffchange diffchange-inline">]] </ins>(Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*12:20-12:30 pm Questions from the audience and concluding remarks</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*12:20-12:30 pm Questions from the audience and concluding remarks</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> </table>

Spujol https://www.na-mic.org/w/index.php?title=Mount_Sinai_Hospital_Workshop&diff=92419&oldid=prev 2016-04-15T15:51:34Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:51, 15 April 2016</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l15" >Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=Local Host=</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=Local Host=</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Patricia Kovatch, Associate Dean, Scientific Computing, Icahn School of Medicine at Mount Sinai</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Patricia Kovatch, Associate Dean, Scientific Computing, Icahn School of Medicine at Mount Sinai</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* [http://www.iacs.stonybrook.edu/people/affiliates/allen-tannenbaum Allen Tannenbaum, Ph.D., Institute for Computational Neuroscience, Stony Brook University<del class="diffchange diffchange-inline">]</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* [http://www.iacs.stonybrook.edu/people/affiliates/allen-tannenbaum Allen Tannenbaum, Ph.D.<ins class="diffchange diffchange-inline">]</ins>, Institute for Computational Neuroscience, Stony Brook University</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=Tentative Agenda=</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=Tentative Agenda=</div></td></tr> </table>

Marianna https://www.na-mic.org/w/index.php?title=Mount_Sinai_Hospital_Workshop&diff=92386&oldid=prev 2016-04-13T16:46:28Z

<p><span dir="auto"><span class="autocomment">Logistics</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:46, 13 April 2016</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l37" >Line 37:</td> <td colspan="2" class="diff-lineno">Line 37:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Datasets:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Datasets:</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:3DVisualizationData.zip | 3D Data Loading and Visualization Dataset]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:3DVisualizationData.zip | 3D Data Loading and Visualization Dataset]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:Dti_tutorial_data.zip‎ |<del class="diffchange diffchange-inline">Slicer  </del>DTI tutorial Dataset]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:Dti_tutorial_data.zip‎ |DTI tutorial Dataset]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:WhiteMatterExplorationData.zip|White Matter Exploration dataset]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:WhiteMatterExplorationData.zip|White Matter Exploration dataset]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** [[Media:3DVisualization DICOM images part1.zip|3D DICOM images]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** [[Media:3DVisualization DICOM images part1.zip|3D DICOM images]]</div></td></tr> </table>

Spujol https://www.na-mic.org/w/index.php?title=Mount_Sinai_Hospital_Workshop&diff=92385&oldid=prev 2016-04-13T16:46:05Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:46, 13 April 2016</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l36" >Line 36:</td> <td colspan="2" class="diff-lineno">Line 36:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[https://www.dropbox.com/s/ygm8xuybqlu7am9/Slicer-4.5.0-2016-04-11-win-amd64.exe?dl=0 Slicer4.5 (Windows)]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[https://www.dropbox.com/s/ygm8xuybqlu7am9/Slicer-4.5.0-2016-04-11-win-amd64.exe?dl=0 Slicer4.5 (Windows)]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Datasets:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Datasets:</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">** [[Media:3DVisualization DICOM images part1.zip|3D Visualization-part 1]] </del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:3DVisualizationData.zip | 3D <ins class="diffchange diffchange-inline">Data Loading and </ins>Visualization Dataset]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:3DVisualizationData.zip | 3D Visualization Dataset <del class="diffchange diffchange-inline">- part 2</del>]]</div></td><td colspan="2"> </td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:Dti_tutorial_data.zip‎ |Slicer  DTI tutorial Dataset]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:Dti_tutorial_data.zip‎ |Slicer  DTI tutorial Dataset]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:WhiteMatterExplorationData.zip|White Matter Exploration dataset]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>**[[Media:WhiteMatterExplorationData.zip|White Matter Exploration dataset]]</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">** [[Media:3DVisualization DICOM images part1.zip|3D DICOM images]]</ins></div></td></tr> </table>

Spujol https://www.na-mic.org/w/index.php?title=Mount_Sinai_Hospital_Workshop&diff=92378&oldid=prev 2016-04-13T05:24:34Z

<p><span dir="auto"><span class="autocomment">Logistics</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 05:24, 13 April 2016</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l31" >Line 31:</td> <td colspan="2" class="diff-lineno">Line 31:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Registration: To register for the event, please send an e-mail to XXX.</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Registration: To register for the event, please send an e-mail to XXX.</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Workshop Materials: In preparation for the hands-on sessions, please download the following software and datasets:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* Workshop Materials: In preparation for the hands-on sessions, please download the following software and datasets:</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*Software: <del class="diffchange diffchange-inline">TBA</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*Software: <ins class="diffchange diffchange-inline">3D Slicer version 4.5: </ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">**[https://www.dropbox.com/s/ayb7mtqb21w9zgz/Slicer-4.5.0-2016-04-11-linux-amd64.tar.gz?dl=0 Slicer4.5 (Linux)]</ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">**[https://www.dropbox.com/s/bt3lnns2gbq2l16/Slicer-4.5.0-2016-04-11-macosx-amd64.dmg?dl=0 Slicer4.5 (MacOSX)]</ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">**[https://www.dropbox.com/s/ygm8xuybqlu7am9/Slicer-4.5.0-2016-04-11-win-amd64.exe?dl=0 Slicer4.5 (Windows)]</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Datasets:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Datasets:</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** [[Media:3DVisualization DICOM images part1.zip|3D Visualization-part 1]]  </div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>** [[Media:3DVisualization DICOM images part1.zip|3D Visualization-part 1]]  </div></td></tr> </table>

Spujol https://www.na-mic.org/w/index.php?title=Mount_Sinai_Hospital_Workshop&diff=92364&oldid=prev 2016-04-05T00:35:52Z

<p>Created page with &quot;{| class=&quot;wikitable&quot; |style=&quot;width:25%&quot; |<a href="/wiki/File:NAMIC.jpg" title="File:NAMIC.jpg">Image:NAMIC.jpg‎</a> |style=&quot;width:25%&quot; |<a href="/wiki/File:NCIGTlogo.gif" title="File:NCIGTlogo.gif">Image:NCIGTlogo.gif</a> |style=&quot;width:25%&quot; |<a href="/wiki/File:Logo_nac.gif" title="File:Logo nac.gif">Image:Logo_nac.gif‎</a> |style=&quot;width:25%&quot; |[...&quot;</p> <p><b>New page</b></p><div>{| class=&quot;wikitable&quot;<br /> |style=&quot;width:25%&quot; |[[Image:NAMIC.jpg‎]]<br /> |style=&quot;width:25%&quot; |[[Image:NCIGTlogo.gif]]<br /> |style=&quot;width:25%&quot; |[[Image:Logo_nac.gif‎]]<br /> |style=&quot;width:25%&quot; |[[Image:MSMCLogo.png]]<br /> |}<br /> <br /> <br /> =Introduction=<br /> The Mount Sinai Hospital workshop is a half-day course that will provide an introduction to the 3D Slicer software for medical image analysis and 3D visualization. The course will cover the basics of how to load and visualize DICOM images in Slicer, and will provide an example of diffusion MRI analysis workflow for surgical planning of tumor resection.<br /> <br /> =Workshop Organizers=<br /> * [https://www.spl.harvard.edu/pages/People/spujol Sonia Pujol, Ph.D., Brigham and Women's Hospital, Harvard Medical School ]<br /> <br /> =Local Host=<br /> * Patricia Kovatch, Associate Dean, Scientific Computing, Icahn School of Medicine at Mount Sinai<br /> * [http://www.iacs.stonybrook.edu/people/affiliates/allen-tannenbaum Allen Tannenbaum, Ph.D., Institute for Computational Neuroscience, Stony Brook University]<br /> <br /> =Tentative Agenda=<br /> *9:30-9:40 am Welcome and Goals of the Workshop (Allen Tannenbaum)<br /> *9:40-10:00 am Introduction to the 3D Slicer software and community (Sonia Pujol)<br /> *10:00-11:00 am Hands-on session 1: 3D Data Loading and Visualization (Sonia Pujol)<br /> *11:00-11:15 am Coffee Break<br /> *11:15-11:45 am Hands on session 2: Diffusion Tensor Imaging (Sonia Pujol)<br /> *11:45-12:20 pm Hands-on session 3: Brain Mapping for Neurosurgery (Sonia Pujol)<br /> *12:20-12:30 pm Questions from the audience and concluding remarks<br /> <br /> =Logistics=<br /> * Date: Friday April 15, 2016<br /> * Location: Mount Sinai, 150 E. 42nd St, Scientific Computing, 2nd Room 4A-12.<br /> * Registration: To register for the event, please send an e-mail to XXX.<br /> * Workshop Materials: In preparation for the hands-on sessions, please download the following software and datasets:<br /> *Software: TBA<br /> *Datasets:<br /> ** [[Media:3DVisualization DICOM images part1.zip|3D Visualization-part 1]] <br /> **[[Media:3DVisualizationData.zip | 3D Visualization Dataset - part 2]]<br /> **[[Media:Dti_tutorial_data.zip‎ |Slicer DTI tutorial Dataset]]<br /> **[[Media:WhiteMatterExplorationData.zip|White Matter Exploration dataset]]</div>

Spujol