Projects:ARRA:SlicerEM:AtlasCreator:PCA - Revision history

Haehn: /* Generate functionality */

2011-03-11T15:00:55Z

Generate functionality

2011-03-11T14:53:32Z

Distance functionality

2011-03-11T14:48:27Z

Main

2011-03-10T22:39:09Z

2011-03-10T21:10:09Z

View functionality

2011-03-10T21:09:02Z

Main

2011-03-10T21:08:28Z

Model functionality

2011-03-10T21:08:18Z

Representation functionality

2011-03-10T21:06:01Z

Parameter functionality

2011-03-10T21:05:31Z

Parameter functionality

@@ Line 111: / Line 111: @@
 * Can you explain the path? <PATH>/case*/<STRUCTURES>/I
 ** In the Atlas Creator, a case does not have subfolders for structures? Does it mean a threshold by label?
 * What does the maximum number of Eigenvectors mean? Should the user specify it?
 * Does the full image range switch calculate the PCA for all intensities?
 * We probably want to define PCA for each label independently, correct?
 * Should we include Normalization even if it is a bad idea? Why is it a bad idea?
 === Model functionality ===

@@ Line 73: / Line 73: @@
 * Does the program support .nrrd output and input?
 * Do we transfer one label at a time to a distance map?
 * Can the maximum and distance values get computed automatically or does the user have to enter them?
 === Generate functionality ===

@@ Line 49: / Line 49: @@
 * What is the general workflow of the PCA functions? First distance, then generate..?
 * Can you give an example of commands which have to be executed during this workflow? (f.e. creating a PCA atlas using segmentations and originals folders?)
 * Do we need to integrate all 6 functions in the Atlas Creator?

← Older revision		Revision as of 22:39, 10 March 2011
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−	= PCA functionality for the Atlas Creator =	+	Back to [[Projects:ARRA:SlicerEM:AtlasCreator\|AtlasCreator]]..
		+
		+	= PCA functionality for the Atlas Creator =

	This content describes the PCA functionality of KilisSandbox.		This content describes the PCA functionality of KilisSandbox.

← Older revision		Revision as of 21:10, 10 March 2011
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	</pre>		</pre>
		+
		+	'''Questions:'''
		+
		+	* ''To turn the shape representation into shape parameters'' - this was the description of other functions too? Is this a mistake or really true?

@@ Line 127: / Line 127: @@
 </pre>
-Questions:
+'''Questions:'''
 * Why do we need 3D models?

← Older revision		Revision as of 21:08, 10 March 2011
Line 183:		Line 183:

	</pre>		</pre>
		+
		+	'''Questions:'''
		+
		+	* What does this do?
		+	* Again, how to specify Max?
		+	* Where does the list of shape parameters come from?

	=== View functionality ===		=== View functionality ===

← Older revision		Revision as of 21:06, 10 March 2011
Line 158:		Line 158:

	* What does this command do?		* What does this command do?
		+	* What are shape representations and what are shape parameters?
		+	* What is the input and output here?

	=== Representation functionality ===		=== Representation functionality ===