Projects:ARRA:SlicerReg - Revision history

Grundlett: Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

2017-07-10T17:41:12Z

Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

Meier: /* Progress */

2011-09-11T13:49:40Z

Progress

Meier at 15:27, 6 September 2011

2011-09-06T15:27:16Z

Meier: /* Progress */

2011-09-05T19:19:18Z

Progress

Meier: /* Progress */

2011-09-05T15:56:00Z

Progress

Meier: /* Progress */

2011-09-05T15:54:51Z

Progress

Meier at 14:53, 29 August 2011

2011-08-29T14:53:28Z

Meier: /* Progress */

2011-08-25T15:05:45Z

Progress

Meier: /* Progress */

2011-08-19T14:40:13Z

Progress

Meier: /* Progress */

2011-08-18T20:40:15Z

Progress

@@ Line 34: / Line 34: @@
 * 2011/04/22:  Prostate multichannel registration, [[Projects:RegistrationDocumentation:RegLibTable|Registration Library update to Slicer version 3.6.3]]
 * 2011/04/15:  [[Projects:RegistrationDocumentation:RegLibTable|Registration Library update to Slicer version 3.6.3]] ,[[Projects:RegistrationLibrary:RegLib_A01#Registration_Library_:_Using_Deformation_Field_Images|Creation & visualization of deformation fields]]
-* 2011/04/08:  registration parameter search for EM segmenter, [http://www.slicer.org/slicerWiki/index.php/Slicer-3-6-FAQ Registration FAQ extensions],   [[Projects:RegistrationDocumentation:UseCaseInventory:Auxiliary|New Registration library category: auxiliary data: A01-A04: grid images to evaluate nonrigid registration]]
+* 2011/04/08:  registration parameter search for EM segmenter, [https://www.slicer.org/wiki/Slicer-3-6-FAQ Registration FAQ extensions],   [[Projects:RegistrationDocumentation:UseCaseInventory:Auxiliary|New Registration library category: auxiliary data: A01-A04: grid images to evaluate nonrigid registration]]
 * 2011/04/01:   [[Projects:RegistrationLibrary:RegLib_C39|new case 39: in vitro thoracic vertebrae CT]],[[Projects:RegistrationLibrary:RegLib_C40|new case 40: micro CT structural analysis]]
-* 2011/03/25:   [[Projects:RegistrationLibrary:RegLib_C28|new case 28: in vitro spine CT]], [http://www.slicer.org/slicerWiki/index.php/Slicer-3-6-FAQ FAQ updates]
+* 2011/03/25:   [[Projects:RegistrationLibrary:RegLib_C28|new case 28: in vitro spine CT]], [https://www.slicer.org/wiki/Slicer-3-6-FAQ FAQ updates]
 * 2011/03/18:   user support & updates/fixes to tutorial for [[Projects:RegistrationLibrary:RegLib_C11|atlas merging]], spine CT registration , CMTK module
 * 2011/03/11:   [[Projects:RegistrationLibrary:RegLib_C37|new case 37:brain tumor MRI]]
@@ Line 50: / Line 50: @@
 * 2010/12/24 : [[2011_Winter_Project_Week#Projects|preparation AHM 2010: DTI registration module: install developer package & libraries]]
 * 2010/12/17 : [[2011_Winter_Project_Week#Registration|preparation AHM 2010]]
-* 2010/12/10 : [[Projects:RegistrationLibrary:RegLib_C34|new case 34: mouse MRI]] , [http://www.slicer.org/slicerWiki/index.php/Slicer-3-6-FAQ User FAQ:moved, edited and expanded ] , [[Projects:RegistrationLibrary:RegLib_C31|new case 31: TBI]]
+* 2010/12/10 : [[Projects:RegistrationLibrary:RegLib_C34|new case 34: mouse MRI]] , [https://www.slicer.org/wiki/Slicer-3-6-FAQ User FAQ:moved, edited and expanded ] , [[Projects:RegistrationLibrary:RegLib_C31|new case 31: TBI]]
 * 2010/12/03 : [[Projects:RegistrationLibrary:RegLib_C33|new case 33: multispectral MRI (surg.planning) incl. FLAIR,T1Gd and DWI- DTI-T1]]
-* 2010/11/26 : [http://www.slicer.org/slicerWiki/index.php/Slicer3:FAQ#Registration Slicer Registration FAQ ]]; DTI registration support
+* 2010/11/26 : [https://www.slicer.org/wiki/Slicer3:FAQ#Registration Slicer Registration FAQ ]]; DTI registration support
 * 2010/11/19 : [[Projects:RegistrationDocumentation:FAQ|new Slicer Registration FAQ]]; [[Projects:RegistrationLibrary:RegLib_C32|new case 32: inverse DTI-T1]],   joint histogram experiments on  [[Projects:RegistrationDocumentation:RegEval_Anisotropy|Effects of Anisotropy and Bias Field Study]];
 * 2010/11/12 : 3.6.1 updates for  [[Projects:RegistrationLibrary:RegLib_C19|Case 19 MRA]] and  [[Projects:RegistrationLibrary:RegLib_C16|Case 16: manual registration]];   user support for  [[Projects:RegistrationLibrary:RegLib_C31|TBI]];
@@ Line 68: / Line 68: @@
 * 2010/08/20 : update registration case library for Slicer 3.6: [[Projects:RegistrationLibrary:RegLib_C02|Case 02]]
 * 2010/07/16 : user assistance with in-vitro spine CT registration  ;  speed benchmarking;  MICCAI [http://empire10.isi.uu.nl/details.php#Writing%20a%20paper Registration Challenge: Methods Paper Revision]
-* 2010/07/09 : [[Projects:RegistrationLibrary:RegLib_C03|DTI resampling]],  ;  updating library for [http://www.slicer.org/slicerWiki/index.php/Slicer3:Registration#Modules_for_Special_Case_Registration new registration options available in Slicer 3.6];
+* 2010/07/09 : [[Projects:RegistrationLibrary:RegLib_C03|DTI resampling]],  ;  updating library for [https://www.slicer.org/wiki/Slicer3:Registration#Modules_for_Special_Case_Registration new registration options available in Slicer 3.6];
 * 2010/07/09 :  MICCAI [http://empire10.isi.uu.nl/details.php#Writing%20a%20paper Registration Challenge: Report Paper]
 * 2010/07/02 :  registration speed benchmarking, [[Projects:RegistrationLibrary:RegLib_C19|Library Case #19 (multi-contrast inter-subject MRI)]]
 * 2010/06/25 :  attending the [[2010_Summer_Project_Week|NA-MIC 2010 Summer All Hands Meeting, Boston]]
 * 2010/06/18 :  [http://empire10.isi.uu.nl MICCAI-EMPIRE10 (Lung registration) Method 2: DemonsWarp], concatenating 3D deformation fields,
-* 2010/06/11 :  MICCAI [http://empire10.isi.uu.nl MICCAI-EMPIRE10 (Lung registration) Method 1: BSpline], debugging issues with loading 3D deformation fields,  [http://www.slicer.org/slicerWiki/index.php/Announcements:Slicer3.6 Slicer3.6 New Features Overview]
+* 2010/06/11 :  MICCAI [http://empire10.isi.uu.nl MICCAI-EMPIRE10 (Lung registration) Method 1: BSpline], debugging issues with loading 3D deformation fields,  [https://www.slicer.org/wiki/Announcements:Slicer3.6 Slicer3.6 New Features Overview]
 * 2010/06/04 :  [http://empire10.isi.uu.nl MICCAI-EMPIRE10 (Lung registration)]: Cluster Batch Processing, [[Projects:RegistrationDocumentation:RegLibTable|new sortable library case table]]
 * 2010/05/28 :  [http://empire10.isi.uu.nl MICCAI-EMPIRE10 (Lung registration) ], [[Projects:RegistrationDocumentation:UseCaseInventoryNotes#Categories_.26_Formatting|new library case naming scheme]] , [[Projects:RegistrationDocumentation:RegLibTable|new sortable library case table]]
-* 2010/05/21 :  [[Projects:RegistrationLibrary:RegLib_C27|Library Case #27]], Update [http://www.slicer.org/slicerWiki/index.php/Registration:Categories Registration] + [http://www.slicer.org/slicerWiki/index.php/Registration:Resampling Resampling Decision Matrix],  User support Animal MRI, Registration Documentation updates for Slicer v3.6
+* 2010/05/21 :  [[Projects:RegistrationLibrary:RegLib_C27|Library Case #27]], Update [https://www.slicer.org/wiki/Registration:Categories Registration] + [https://www.slicer.org/wiki/Registration:Resampling Resampling Decision Matrix],  User support Animal MRI, Registration Documentation updates for Slicer v3.6
-* 2010/05/14 :  [[Projects:RegistrationLibrary:RegLib_C10|Library Case #10]], Mori Atlas registration, User support DTI, [http://www.slicer.org/slicerWiki/index.php/Modules:RegisterImages-Documentation-3.6 Registration Documentation updates for Slicer v3.6]
+* 2010/05/14 :  [[Projects:RegistrationLibrary:RegLib_C10|Library Case #10]], Mori Atlas registration, User support DTI, [https://www.slicer.org/wiki/Modules:RegisterImages-Documentation-3.6 Registration Documentation updates for Slicer v3.6]
-* 2010/05/07 :  [http://www.slicer.org/slicerWiki/index.php/Registration:Resampling Resampling Feature Matrix], Mori Atlas registration
+* 2010/05/07 :  [https://www.slicer.org/wiki/Registration:Resampling Resampling Feature Matrix], Mori Atlas registration
-* 2010/04/30 :  User support prostate IGT, [http://www.slicer.org/slicerWiki/index.php/Registration:Categories Registration Feature Matrix], Mouse tumor serial MRI registration, Mori Atlas registration
+* 2010/04/30 :  User support prostate IGT, [https://www.slicer.org/wiki/Registration:Categories Registration Feature Matrix], Mouse tumor serial MRI registration, Mori Atlas registration
-* 2010/04/23 :  [http://www.slicer.org/slicerWiki/index.php/Modules:RegisterImages-Documentation-3.6 Slicer 3.6 documentation page], [[Projects:RegistrationDocumentation:UseCaseAdvertisement|Library  advertisement page]], [[Projects:RegistrationDocumentation:Anonymization|anonymization instructions]], [http://www.slicer.org/slicerWiki/index.php/Registration:Categories Registration  portal: select by category], IGT example case
+* 2010/04/23 :  [https://www.slicer.org/wiki/Modules:RegisterImages-Documentation-3.6 Slicer 3.6 documentation page], [[Projects:RegistrationDocumentation:UseCaseAdvertisement|Library  advertisement page]], [[Projects:RegistrationDocumentation:Anonymization|anonymization instructions]], [https://www.slicer.org/wiki/Registration:Categories Registration  portal: select by category], IGT example case
-* 2010/04/16 :  [http://www.slicer.org/slicerWiki/index.php/Slicer3:Registration#Registration_in_3D_Slicer reformat Slicer registration portal page & links], complete [[Projects:RegistrationLibrary:RegLib_C08|Case #8 (BSpline Resampling)]], [[Projects:RegistrationLibrary:RegLib_C16|Library Case #16 (manual registration)]]
+* 2010/04/16 :  [https://www.slicer.org/wiki/Slicer3:Registration#Registration_in_3D_Slicer reformat Slicer registration portal page & links], complete [[Projects:RegistrationLibrary:RegLib_C08|Case #8 (BSpline Resampling)]], [[Projects:RegistrationLibrary:RegLib_C16|Library Case #16 (manual registration)]]
 * 2010/04/09 :  [[Projects:RegistrationLibrary:RegLib_C15|Library Case #15 (Brain AC-PC alignment)]],  user support for IGT registration
 * 2010/04/02 :  [[Projects:RegistrationLibrary:RegLib_C27|Library Case #14 (Brain PET-MRI)]],  Deformable B-spline registration: resampling issues

@@ Line 16: / Line 16: @@
 =Progress=
 <!--* 2011/09/09:  [[Projects:RegistrationLibrary:RegLib_C17|new case 17: kidney MR-CT ]] ,  [[Projects:RegistrationLibrary:RegLib_C20|new case 20: whole body PET-CT ]]  ,  [[Projects:RegistrationLibrary:RegLib_C21|new case 21: knee MRI ]]  -->
 * 2011/09/02:  [[Projects:RegistrationLibrary:RegLib_C09|new case 09: fMRI to anatomical ref]]  ,  batch processing for in-vitro spine registration: scripting for Matlab & Windows OS
 * 2011/08/26:    [[Projects:RegistrationLibrary:RegLib_C12|new case 12: liver MR-CT]] ; testing of Registration example case for Slicer4 presentation at RSNA;    [[Projects:RegistrationLibrary:RegLib_C07|new case 07: prostate MRI]]

@@ Line 15: / Line 15: @@
 =Progress=
-<!--* 2011/09/09:  [[Projects:RegistrationLibrary:RegLib_C17|new case 17: kidney MR-CT ]] ,  [[Projects:RegistrationLibrary:RegLib_C20|new case 20: whole body PET-CT ]]   -->
+<!--* 2011/09/09:  [[Projects:RegistrationLibrary:RegLib_C17|new case 17: kidney MR-CT ]] ,  [[Projects:RegistrationLibrary:RegLib_C20|new case 20: whole body PET-CT ]]  ,  [[Projects:RegistrationLibrary:RegLib_C21|new case 21: knee MRI ]]  -->
 * 2011/09/02:  [[Projects:RegistrationLibrary:RegLib_C09|new case 09: fMRI to anatomical ref]]  ,  batch processing for in-vitro spine registration: scripting for Matlab & Windows OS
 * 2011/08/26:    [[Projects:RegistrationLibrary:RegLib_C12|new case 12: liver MR-CT]] ; testing of Registration example case for Slicer4 presentation at RSNA;    [[Projects:RegistrationLibrary:RegLib_C07|new case 07: prostate MRI]]

@@ Line 15: / Line 15: @@
 =Progress=
-<!--* 2011/09/09:  [[Projects:RegistrationLibrary:RegLib_C17|new case 17: kidney MR-CT ]]   -->
+<!--* 2011/09/09:  [[Projects:RegistrationLibrary:RegLib_C17|new case 17: kidney MR-CT ]] ,  [[Projects:RegistrationLibrary:RegLib_C20|new case 20: whole body PET-CT ]]   -->
 * 2011/09/02:  [[Projects:RegistrationLibrary:RegLib_C09|new case 09: fMRI to anatomical ref]]  ,  batch processing for in-vitro spine registration: scripting for Matlab & Windows OS
 * 2011/08/26:    [[Projects:RegistrationLibrary:RegLib_C12|new case 12: liver MR-CT]] ; testing of Registration example case for Slicer4 presentation at RSNA;    [[Projects:RegistrationLibrary:RegLib_C07|new case 07: prostate MRI]]

@@ Line 16: / Line 16: @@
 =Progress=
 <!--* 2011/09/09:  [[Projects:RegistrationLibrary:RegLib_C17|new case 17: kidney MR-CT ]]   -->
-* 2011/09/02:  [[Projects:RegistrationLibrary:RegLib_C09|new case 09: ]]  ,
+* 2011/09/02:  [[Projects:RegistrationLibrary:RegLib_C09|new case 09: fMRI to anatomical ref]]  ,  batch processing for in-vitro spine registration: scripting for Matlab & Windows OS
 * 2011/08/26:    [[Projects:RegistrationLibrary:RegLib_C12|new case 12: liver MR-CT]] ; testing of Registration example case for Slicer4 presentation at RSNA;    [[Projects:RegistrationLibrary:RegLib_C07|new case 07: prostate MRI]]
 * 2011/08/19:   [[Projects:RegistrationLibrary:RegLib_C44|new case 44: CT human pelvis]] ; testing of Registration modules for Slicer4;  [[Projects:RegistrationLibrary:RegLib_C43|new case 43: CT vetebra surface registration]]

@@ Line 16: / Line 16: @@
 =Progress=
 <!--* 2011/08/26:    [[Projects:RegistrationLibrary:RegLib_C12|new case 12: liver MR-CT]] ; testing of Registration example case for Slicer4 presentation at RSNA;  -->
-<!--* 2011/08/19:    [[Projects:RegistrationLibrary:RegLib_C44|new case 44: CT human pelvis]] ; testing of Registration modules for Slicer4;  [[Projects:RegistrationLibrary:RegLib_C43|new case 43: CT vetebra surface registration]] -->
+* 2011/08/19:   [[Projects:RegistrationLibrary:RegLib_C44|new case 44: CT human pelvis]] ; testing of Registration modules for Slicer4;  [[Projects:RegistrationLibrary:RegLib_C43|new case 43: CT vetebra surface registration]]
 * 2011/08/12:   testing of Registration modules for Slicer4;  in-vitro spine registration: surface-to-surface registration & batch pipeline
 * 2011/08/05:   [[Projects:RegistrationLibrary:RegLib_C42|new case 42: serial pediatric MRI in Autism]]