Projects:MATLABSlicerExampleModule - Revision history

Grundlett: Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

2017-07-10T18:07:34Z

Text replacement - "http://www.slicer.org/slicerWiki/index.php/" to "https://www.slicer.org/wiki/"

2013-11-16T01:15:32Z

2013-07-11T16:35:49Z

2011-10-26T18:00:36Z

2011 Updates

2011-10-26T18:00:05Z

2011-10-26T17:59:47Z

2008-09-09T16:20:29Z

2008-09-09T16:18:18Z

2008-09-09T16:16:54Z

2008-09-09T16:15:56Z

Description of nrrdSaveWithMetadata()

@@ Line 1: / Line 1: @@
-<font color="red">'''See the [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge MatlabBridge] extension for a comprehensive solution for calling Matlab functions from Slicer'''</font>
+<font color="red">'''See the [https://www.slicer.org/wiki/Documentation/Nightly/Extensions/MatlabBridge MatlabBridge] extension for a comprehensive solution for calling Matlab functions from Slicer'''</font>
   Back to [[Algorithm:Stony Brook|Stony Brook Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
 = MATLAB Slicer Example Module =

@@ Line 1: / Line 1: @@
 <font color="red">'''See the [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge MatlabBridge] extension for a comprehensive solution for calling Matlab functions from Slicer'''</font>
-  Back to [[Algorithm:GATech|Georgia Tech Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
+  Back to [[Algorithm:Stony Brook|Stony Brook Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
 = MATLAB Slicer Example Module =

← Older revision		Revision as of 16:35, 11 July 2013
Line 1:		Line 1:
		+	<font color="red">'''See the [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge MatlabBridge] extension for a comprehensive solution for calling Matlab functions from Slicer'''</font>
	Back to [[Algorithm:GATech\|Georgia Tech Algorithms]], [[Engineering:Isomics\|Isomics Engineering]]		Back to [[Algorithm:GATech\|Georgia Tech Algorithms]], [[Engineering:Isomics\|Isomics Engineering]]
	= MATLAB Slicer Example Module =		= MATLAB Slicer Example Module =

@@ Line 162: / Line 162: @@
 =2011 Updates=
-The published code relies on an earlier release of Slicer, which used teem 1.9.0. You can download that version of teem here: http://sourceforge.net/projects/teem/files/teem/1.9.0/ and compile separately. While configuring, set BUILD_SHARED_LIBS to YES, and TEEN_ZLIP to ON. Add the directory ${TEEM_BIN_HOME}/bin to your $LD_LIBRARY_PATH.
+The published code relies on an earlier release of Slicer, which used teem 1.9.0. You can download that version of teem here: http://sourceforge.net/projects/teem/files/teem/1.9.0/ and compile separately. While configuring, set BUILD_SHARED_LIBS to ON, and TEEN_ZLIB to ON. Add the directory ${TEEM_BIN_HOME}/bin to your $LD_LIBRARY_PATH.
 = Key Investigators =

@@ Line 160: / Line 160: @@
 Contact John Melonakos (jmelonak <at> ece.gatech.edu) if you have questions.  This project is currently in beta phase and is seeking input from the broader community.
-==2011 Updates==
+=2011 Updates=
 The published code relies on an earlier release of Slicer, which used teem 1.9.0. You can download that version of teem here: http://sourceforge.net/projects/teem/files/teem/1.9.0/ and compile separately. While configuring, set BUILD_SHARED_LIBS to YES, and TEEN_ZLIP to ON. Add the directory ${TEEM_BIN_HOME}/bin to your $LD_LIBRARY_PATH.

@@ Line 156: / Line 156: @@
 %   nrrdKindLast
 </pre>
 = Key Investigators =

@@ Line 30: / Line 30: @@
 # Make sure you have tclsh installed
 # Download the zip file above
-# Edit compilethis.m (follow the instructions inside the file)
+# Edit compilethis.m (follow the instructions inside the file) & and run within MATLAB to compile the nrrdLoadWithMetadata and nrrdSaveWithMetadata functions.
 # Edit CLI-shell.sh (follow the instructions inside the file)
 # Add the path in Slicer3 to point to this module:  View->Application Settings->Module Settings->Add a preset

@@ Line 1: / Line 1: @@
-Back to [[Algorithm:GATech|Georgia Tech Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
+ Back to [[Algorithm:GATech|Georgia Tech Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
 __NOTOC__
 = MATLAB Slicer Example Module =
@@ Line 159: / Line 159: @@
 = Key Investigators =
-* Georgia Tech: John Melonakos, Yi Gao, Allen Tannenbaum
+* Georgia Tech: John Melonakos (jmelonak <at> ece.gatech.edu), Yi Gao, Allen Tannenbaum
 * Isomics: Steve Pieper
 * BWH: C-F Westin, Gordon Kindlmann
 [[Category:Slicer]]

@@ Line 1: / Line 1: @@
- Back to [[Algorithm:GATech|Georgia Tech Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
+Back to [[Algorithm:GATech|Georgia Tech Algorithms]], [[Engineering:Isomics|Isomics Engineering]]
 __NOTOC__
 = MATLAB Slicer Example Module =
@@ Line 78: / Line 78: @@
 % -- 06 = spaceorigin       (double array) nrrd->spaceOrigin[NRRD_SPACE_DIM_MAX]
 % -- 07 = measurementframe  (double matrix) nrrd->measurementFrame[NRRD_SPACE_DIM_MAX][NRRD_SPACE_DIM_MAX]
-% -- OPTIONAL:
+% -- NOT YET IMPLEMENTED:
 % -- 08 = modality          (string) nrrd->kvp[1]
 % -- 09 = bvalue            (double) bKVP