Projects:RegistrationDocumentation:UseCaseInventory:BrainAtlas - Revision history

Meier at 15:33, 28 May 2010

2010-05-28T15:33:42Z

Meier: /* Case Inventory Brain Atlas Registration */

2010-05-05T20:18:05Z

Case Inventory Brain Atlas Registration

Meier at 17:46, 18 February 2010

2010-02-18T17:46:44Z

Meier at 20:52, 3 February 2010

2010-02-03T20:52:02Z

Meier: Created page with 'back to Library Main Page
==Case Inventory Brain Atlas Registration == This library segments contains cases that see…'

2010-02-03T20:40:11Z

Created page with 'back to Library Main Page <br> ==Case Inventory Brain Atlas Registration == This library segments contains cases that see…'

New page

[[Projects:RegistrationDocumentation:UseCaseInventory|back to Library Main Page]] <br>
==Case Inventory Brain Atlas Registration ==
This library segments contains cases that seek to align an atlas containing detailed structural/functional information with an individual subject, or to align multiple subjects to a common space to build an atlas. The main challenge here is anatomical variability. The results of inter-subject registration by definition will vary with the degrees of freedom (DOF) allowed.

*[[Image:RegLib_C03_Baseline_axial.png|70px|lleft|RegLib 03: DTI alignment]] [[Image:RegLib_C03_DTIVol_axial.png|70px|lleft|RegLib C03: DTI alignment]] '''Case 10: [[Projects:RegistrationDocumentation:RegLib_10_EMSegmentAtlas|Alignment of a probabilistic atlas to a structural T2 volume for use as prior in EM tissue class segmentation]]'''

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 This library segments contains cases that seek to align an atlas containing detailed structural/functional information with an individual subject, or to align multiple subjects to a common space to build an atlas. The main challenge here is anatomical variability. The results of inter-subject registration by definition will vary with the degrees of freedom (DOF) allowed.
-*[[Image:RegLib_C10_EMAtlas1.png|70px|lleft|Target Brain]] [[Image:RegLib_C10_EMAtlas2.png|70px|lleft|Probabilistic Tissue Atlas]]   '''Case 10: [[Projects:RegistrationDocumentation:RegLib_10_AtlasBasedSegmentation|Segmentation via co-registered probabilistic tissue atlas]]'''
+*[[Image:RegLib_C10_EMAtlas1.png|70px|lleft|Target Brain]] [[Image:RegLib_C10_EMAtlas2.png|70px|lleft|Probabilistic Tissue Atlas]]   '''Case 10: [[Projects:RegistrationLibrary:RegLib_C10|Segmentation via co-registered probabilistic tissue atlas]]'''
-*[[Image:RegLib_C11_AtlasMerge_1.png|70px|lleft|Atlas 1 with thalamic nuclei]] [[Image:RegLib_C11_AtlasMerge_2.png|70px|lleft|Atlas 2 without thalamic nuclei]]   '''Case 11: [[Projects:RegistrationDocumentation:RegLib_11_AtlasThalamicLabelMerge|Atlas label merging: Estimates of thalamic nuclei location via co-registered atlas]]'''
+*[[Image:RegLib_C11_AtlasMerge_1.png|70px|lleft|Atlas 1 with thalamic nuclei]] [[Image:RegLib_C11_AtlasMerge_2.png|70px|lleft|Atlas 2 without thalamic nuclei]]   '''Case 11: [[Projects:RegistrationLibrary:RegLib_C11|Atlas label merging: Estimates of thalamic nuclei location via co-registered atlas]]'''
-*[[Image:NAMIC logo.png|70px|lleft|RegLib Thumbnail placeholder]] [[Image:NAMIC logo.png|70px|lleft|RegLib Thumbnail placeholder]]  '''Case 26: [[Projects:RegistrationDocumentation:RegLib_26_MoriAtlas|Fusion of SPL atlas and WM parcellation atlas (JHU_MNI_SS)]]'''
+*[[Image:NAMIC logo.png|70px|lleft|RegLib Thumbnail placeholder]] [[Image:NAMIC logo.png|70px|lleft|RegLib Thumbnail placeholder]]  '''Case 26: [[Projects:RegistrationLibrary:RegLib_C26|Fusion of SPL atlas and WM parcellation atlas (JHU_MNI_SS)]]'''

← Older revision		Revision as of 20:18, 5 May 2010
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	*[[Image:RegLib_C10_EMAtlas1.png\|70px\|lleft\|Target Brain]] [[Image:RegLib_C10_EMAtlas2.png\|70px\|lleft\|Probabilistic Tissue Atlas]] '''Case 10: [[Projects:RegistrationDocumentation:RegLib_10_AtlasBasedSegmentation\|Segmentation via co-registered probabilistic tissue atlas]]'''		*[[Image:RegLib_C10_EMAtlas1.png\|70px\|lleft\|Target Brain]] [[Image:RegLib_C10_EMAtlas2.png\|70px\|lleft\|Probabilistic Tissue Atlas]] '''Case 10: [[Projects:RegistrationDocumentation:RegLib_10_AtlasBasedSegmentation\|Segmentation via co-registered probabilistic tissue atlas]]'''
	*[[Image:RegLib_C11_AtlasMerge_1.png\|70px\|lleft\|Atlas 1 with thalamic nuclei]] [[Image:RegLib_C11_AtlasMerge_2.png\|70px\|lleft\|Atlas 2 without thalamic nuclei]] '''Case 11: [[Projects:RegistrationDocumentation:RegLib_11_AtlasThalamicLabelMerge\|Atlas label merging: Estimates of thalamic nuclei location via co-registered atlas]]'''		*[[Image:RegLib_C11_AtlasMerge_1.png\|70px\|lleft\|Atlas 1 with thalamic nuclei]] [[Image:RegLib_C11_AtlasMerge_2.png\|70px\|lleft\|Atlas 2 without thalamic nuclei]] '''Case 11: [[Projects:RegistrationDocumentation:RegLib_11_AtlasThalamicLabelMerge\|Atlas label merging: Estimates of thalamic nuclei location via co-registered atlas]]'''
		+	*[[Image:NAMIC logo.png\|70px\|lleft\|RegLib Thumbnail placeholder]] [[Image:NAMIC logo.png\|70px\|lleft\|RegLib Thumbnail placeholder]] '''Case 26: [[Projects:RegistrationDocumentation:RegLib_26_MoriAtlas\|Fusion of SPL atlas and WM parcellation atlas (JHU_MNI_SS)]]'''

← Older revision		Revision as of 17:46, 18 February 2010
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	This library segments contains cases that seek to align an atlas containing detailed structural/functional information with an individual subject, or to align multiple subjects to a common space to build an atlas. The main challenge here is anatomical variability. The results of inter-subject registration by definition will vary with the degrees of freedom (DOF) allowed.		This library segments contains cases that seek to align an atlas containing detailed structural/functional information with an individual subject, or to align multiple subjects to a common space to build an atlas. The main challenge here is anatomical variability. The results of inter-subject registration by definition will vary with the degrees of freedom (DOF) allowed.

−	*[[Image:RegLib_C10_EMAtlas1.png\|70px\|lleft\|~~RegLib~~ 10: ~~Atlas alignment~~: ~~structure image~~]] [[Image:~~RegLib_C10_EMAtlas2~~.png\|70px\|lleft\|~~RegLib 10~~: Atlas ~~alignment: atlas image~~]] '''Case 10: [[Projects:RegistrationDocumentation:~~RegLib_10_EMSegmentAtlas~~\|~~Alignment~~ of ~~a probabilistic~~ atlas ~~to a structural T2 volume for use as prior in EM tissue class segmentation~~]]'''	+	*[[Image:RegLib_C10_EMAtlas1.png\|70px\|lleft\|Target Brain]] [[Image:RegLib_C10_EMAtlas2.png\|70px\|lleft\|Probabilistic Tissue Atlas]] '''Case 10: [[Projects:RegistrationDocumentation:RegLib_10_AtlasBasedSegmentation\|Segmentation via co-registered probabilistic tissue atlas]]'''
		+	*[[Image:RegLib_C11_AtlasMerge_1.png\|70px\|lleft\|Atlas 1 with thalamic nuclei]] [[Image:RegLib_C11_AtlasMerge_2.png\|70px\|lleft\|Atlas 2 without thalamic nuclei]] '''Case 11: [[Projects:RegistrationDocumentation:RegLib_11_AtlasThalamicLabelMerge\|Atlas label merging: Estimates of thalamic nuclei location via co-registered atlas]]'''