https://www.na-mic.org/w/index.php?action=history&feed=atom&title=SPIE_2012_DTI_Workshop 2026-04-04T19:22:31Z Revision history for this page on the wiki MediaWiki 1.33.0 https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74311&oldid=prev 2012-03-09T14:08:15Z

<p><span dir="auto"><span class="autocomment">Tentative Agenda</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 14:08, 9 March 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l49" >Line 49:</td> <td colspan="2" class="diff-lineno">Line 49:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:25-4:30 pm [[media:DTI Analysis Tutorial SoniaPujol SPIE2012.pdf| From DWI images to fiber tracts]](Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:25-4:30 pm [[media:DTI Analysis Tutorial SoniaPujol SPIE2012.pdf| From DWI images to fiber tracts]](Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:30-4:50 pm [[media:DTIValidation_SoniaPujol_SPIE2012.pdf‎| Towards validation of  DTI Tractography]] (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:30-4:50 pm [[media:DTIValidation_SoniaPujol_SPIE2012.pdf‎| Towards validation of  DTI Tractography]] (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-<del class="diffchange diffchange-inline">X</del>-<del class="diffchange diffchange-inline">FiberViewerLightTutorial</del>.<del class="diffchange diffchange-inline">pdf‎ </del>| Slides <del class="diffchange diffchange-inline">6.1MB</del>]])</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) <ins class="diffchange diffchange-inline"> </ins>([[media:2012-SPIE-<ins class="diffchange diffchange-inline">5</ins>-<ins class="diffchange diffchange-inline">FiberAnalysis</ins>.<ins class="diffchange diffchange-inline">pdf</ins>| Slides <ins class="diffchange diffchange-inline">PDF</ins>]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"></ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">* Additional slides: FiberViewerLight tutorial  ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides PDF]])</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Preparation for the hands-on sessions: Software and datasets ==</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==Preparation for the hands-on sessions: Software and datasets ==</div></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74016&oldid=prev 2012-02-06T01:40:37Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 01:40, 6 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l47" >Line 47:</td> <td colspan="2" class="diff-lineno">Line 47:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:10 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:10 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:10-3:25 pm Coffee Break</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:10-3:25 pm Coffee Break</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*3:25-4:30 pm [[media<del class="diffchange diffchange-inline">:File</del>:DTI Analysis Tutorial SoniaPujol SPIE2012.pdf| From DWI images to fiber tracts]](Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*3:25-4:30 pm [[media:DTI Analysis Tutorial SoniaPujol SPIE2012.pdf| From DWI images to fiber tracts]](Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:30-4:50 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:30-4:50 pm <ins class="diffchange diffchange-inline">[[media:DTIValidation_SoniaPujol_SPIE2012.pdf‎| </ins>Towards validation of  DTI Tractography<ins class="diffchange diffchange-inline">]] </ins>(Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td></tr> </table>

Spujol https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74015&oldid=prev 2012-02-06T01:39:47Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 01:39, 6 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l47" >Line 47:</td> <td colspan="2" class="diff-lineno">Line 47:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:10 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:10 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:10-3:25 pm Coffee Break</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:10-3:25 pm Coffee Break</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*3:25-4:30 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*3:25-4:30 pm <ins class="diffchange diffchange-inline">[[media:File:DTI Analysis Tutorial SoniaPujol SPIE2012.pdf| </ins>From DWI images to fiber tracts<ins class="diffchange diffchange-inline">]]</ins>(Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:30-4:50 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:30-4:50 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td></tr> </table>

Spujol https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74010&oldid=prev 2012-02-05T19:12:36Z

<p><span dir="auto"><span class="autocomment">Tentative Agenda</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 19:12, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l45" >Line 45:</td> <td colspan="2" class="diff-lineno">Line 45:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) ( [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) ( [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]])</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:<del class="diffchange diffchange-inline">00 </del>pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:<ins class="diffchange diffchange-inline">10 </ins>pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*3:<del class="diffchange diffchange-inline">00</del>-3:<del class="diffchange diffchange-inline">15 </del>pm Coffee Break</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*3:<ins class="diffchange diffchange-inline">10</ins>-3:<ins class="diffchange diffchange-inline">25 </ins>pm Coffee Break</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*3:<del class="diffchange diffchange-inline">15</del>-4:<del class="diffchange diffchange-inline">20 </del>pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*3:<ins class="diffchange diffchange-inline">25</ins>-4:<ins class="diffchange diffchange-inline">30 </ins>pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:<del class="diffchange diffchange-inline">20</del>-4:50 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:<ins class="diffchange diffchange-inline">30</ins>-4:50 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:50-5:15 pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74009&oldid=prev 2012-02-05T19:08:17Z

<p><span dir="auto"><span class="autocomment">Tentative Agenda</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 19:08, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l45" >Line 45:</td> <td colspan="2" class="diff-lineno">Line 45:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) ( [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) ( [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]])</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3<del class="diffchange diffchange-inline">:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking) </del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:00 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]]<ins class="diffchange diffchange-inline">)</ins></div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">*3:45-4</del>:00 <del class="diffchange diffchange-inline">pm Coffee Break</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">*3:00-3:15 pm Coffee Break</ins></div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">*4:00-4:20 </del>pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">*3:15-4:20 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking</ins>)  </div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:20-4:<del class="diffchange diffchange-inline">45 </del>pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]]<del class="diffchange diffchange-inline">)</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:20-4:<ins class="diffchange diffchange-inline">50 pm Towards validation of  DTI Tractography (Sonia Pujol)</ins></div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del class="diffchange diffchange-inline">*4:45-5:15 pm Towards validation of  DTI Tractography (Sonia Pujol</del>)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">*4:50-5:15 </ins>pm DTI fiber profile processing and analysis (Martin Styner) ([[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74008&oldid=prev 2012-02-05T18:54:13Z

<p><span dir="auto"><span class="autocomment">Tentative Agenda</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:54, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l45" >Line 45:</td> <td colspan="2" class="diff-lineno">Line 45:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) ( [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) ( [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]])</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking) <del class="diffchange diffchange-inline">[[ media:DTI_Analysis_Tutorial_SoniaPujol.pdf | Slides]]</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)  </div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:45-4:00 pm Coffee Break</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:45-4:00 pm Coffee Break</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:00-4:20 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:00-4:20 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74007&oldid=prev 2012-02-05T18:53:23Z

<p><span dir="auto"><span class="autocomment">Preparation for the hands-on sessions: Software and datasets</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:53, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l69" >Line 69:</td> <td colspan="2" class="diff-lineno">Line 69:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>'''Course Datasets''':</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>'''Course Datasets''':</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*[http://hdl.handle.net/1926/1759 SPIE Workshop Dataset 1 (DICOM / QC example and DTI Atlas)] (<del class="diffchange diffchange-inline">269.95 </del>MB)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*[http://hdl.handle.net/1926/1759 SPIE Workshop Dataset 1 (DICOM / QC example and DTI Atlas)] (<ins class="diffchange diffchange-inline">464 </ins>MB)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[[media:DiffusionMRI_tutorialData.zip‎|SPIE Workshop Dataset 2 (Diffusion MRI analysis Pipeline)]] (64.6 MB)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[[media:DiffusionMRI_tutorialData.zip‎|SPIE Workshop Dataset 2 (Diffusion MRI analysis Pipeline)]] (64.6 MB)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74006&oldid=prev 2012-02-05T15:29:16Z

<p><span dir="auto"><span class="autocomment">Tentative Agenda</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:29, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l44" >Line 44:</td> <td colspan="2" class="diff-lineno">Line 44:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*1:35-2:00 pm Fundamentals of DTI analysis (Guido Gerig) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pdf|Slides pdf 6Mb]]) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pptx|Slides pptx 6MB]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*1:35-2:00 pm Fundamentals of DTI analysis (Guido Gerig) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pdf|Slides pdf 6Mb]]) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pptx|Slides pptx 6MB]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) <del class="diffchange diffchange-inline"> </del>[[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep) <ins class="diffchange diffchange-inline">( </ins>[[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.2MB]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.1MB]]<ins class="diffchange diffchange-inline">)</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking) [[ media:DTI_Analysis_Tutorial_SoniaPujol.pdf | Slides]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking) [[ media:DTI_Analysis_Tutorial_SoniaPujol.pdf | Slides]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:45-4:00 pm Coffee Break</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:45-4:00 pm Coffee Break</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:00-4:20 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:00-4:20 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.9MB)]])</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:20-4:45 pm DTI fiber profile processing and analysis (Martin Styner) [[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:20-4:45 pm DTI fiber profile processing and analysis (Martin Styner) <ins class="diffchange diffchange-inline">(</ins>[[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.1MB]]<ins class="diffchange diffchange-inline">)</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:45-5:15 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:45-5:15 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74005&oldid=prev 2012-02-05T15:28:33Z

<p><span dir="auto"><span class="autocomment">Tentative Agenda</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:28, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l42" >Line 42:</td> <td colspan="2" class="diff-lineno">Line 42:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*12:30-1:30 pm Pre-workshop installation of software and datasets</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*12:30-1:30 pm Pre-workshop installation of software and datasets</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*1:30-1:35 pm Introduction to the course (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*1:30-1:35 pm Introduction to the course (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*1:35-2:00 pm Fundamentals of DTI analysis (Guido Gerig) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pdf|Slides pdf 6Mb]]) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pptx|Slides pptx <del class="diffchange diffchange-inline">6Mb</del>]])</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*1:35-2:00 pm Fundamentals of DTI analysis (Guido Gerig) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pdf|Slides pdf 6Mb]]) ([[media:DTI_intro_SPIE_NAMIC-Feb2012-small.pptx|Slides pptx <ins class="diffchange diffchange-inline">6MB</ins>]])</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*2:00-2:10 pm Presentation of the hands-on DTI pipeline (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep)  [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.<del class="diffchange diffchange-inline">2Mb</del>]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.<del class="diffchange diffchange-inline">1Mb</del>]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*2:10-2:40 pm Dicom conversion and DWI Quality Control (Martin Styner) (Dicom to Nrrd, DTIPrep)  [[ media:2012-SPIE-1-DICOMToNRRDConversionTutorial.pdf| DICOM Slides PDF 2.<ins class="diffchange diffchange-inline">2MB</ins>]] , [[ media:2012-SPIE-2-DTIQC.pdf | DTIPrep slides PDF 2.<ins class="diffchange diffchange-inline">1MB</ins>]]</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*2:40-3:45 pm From DWI images to fiber tracts (Sonia Pujol)  (Tensor Estimation,  Glyphs, Scalar Diffusion Measurements, Fiber Tracking) <ins class="diffchange diffchange-inline">[[ media:DTI_Analysis_Tutorial_SoniaPujol.pdf | Slides]]</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:45-4:00 pm Coffee Break</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*3:45-4:00 pm Coffee Break</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:00-4:20 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.<del class="diffchange diffchange-inline">9Mb</del>)]])</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:00-4:20 pm DTI (pairwise) registration for clinical studies (Guido Gerig/Martin Styner) ([[media:2012-SPIE-DTI-Reg-Tutorial.pdf|Slides pdf: 3.4Mb)]]  / ([[media:2012-SPIE-DTI-Reg-Tutorial.pptx|Slides pptx: 14.<ins class="diffchange diffchange-inline">9MB</ins>)]])</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*4:20-4:45 pm DTI fiber profile processing and analysis (Martin Styner) [[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.<del class="diffchange diffchange-inline">1Mb</del>]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*4:20-4:45 pm DTI fiber profile processing and analysis (Martin Styner) [[media:2012-SPIE-X-FiberViewerLightTutorial.pdf‎ | Slides 6.<ins class="diffchange diffchange-inline">1MB</ins>]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:45-5:15 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*4:45-5:15 pm Towards validation of  DTI Tractography (Sonia Pujol)</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*5:15-5:30 pm Conclusion and Questions from the audience</div></td></tr> </table>

Styner https://www.na-mic.org/w/index.php?title=SPIE_2012_DTI_Workshop&diff=74004&oldid=prev 2012-02-05T15:27:14Z

<p><span dir="auto"><span class="autocomment">Preparation for the hands-on sessions: Software and datasets</span></span></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 15:27, 5 February 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l63" >Line 63:</td> <td colspan="2" class="diff-lineno">Line 63:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>'''Course Software''':</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>'''Course Software''':</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Slicer4.0.1 MacOSX: (355.8 MB)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Slicer4.0.1 MacOSX: (355.8 MB) <ins class="diffchange diffchange-inline">[http://slicer.kitware.com/midas3/item/305 Download at Slicer MIDAS]</ins></div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Slicer4.0.1 Windows7 64 bits (284.6 MB)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Slicer4.0.1 Windows7 64 bits (284.6 MB) <ins class="diffchange diffchange-inline">[http://slicer.kitware.com/midas3/item/310 Download at Slicer MIDAS]</ins></div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* Slicer4.0.1 Linux amd 64 bits (719.6 MB)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* Slicer4.0.1 Linux amd 64 bits (719.6 MB) <ins class="diffchange diffchange-inline">[http://slicer.kitware.com/midas3/item/311 Download at Slicer MIDAS]</ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> </div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>'''Course Datasets''':</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>'''Course Datasets''':</div></td></tr> </table>

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